EY753649

Overview
NameEY753649
Unique NameEY753649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3)

HSP 1 Score: 322.398 bits (825), Expect = 2.110e-87
Identity = 159/203 (78.33%), Postives = 173/203 (85.22%), Query Frame = 2
Query:  158 TTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            ++MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQ SFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT  KVV Y TAK FAD +GIPF+ETSAK++TNVEQ+FM MAA IK RM    +   A  S V+I+  PV    G C
Sbjct:    2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 3.046e-86
Identity = 158/204 (77.45%), Postives = 177/204 (86.76%), Query Frame = 2
Query:  158 TTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPV-AXKSGCC 766
            +TMNP+YDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVGNK DLT  KVV + TAK +AD++GIPF+ETSAK++TNVEQAFM MAA IK+RM    + ++++ S       PV A K GCC
Sbjct:    2 STMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPSVKINSSTPVSANKGGCC 205          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 7.023e-83
Identity = 152/203 (74.88%), Postives = 170/203 (83.74%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKS--GCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGI +VYDVTD +SFNNVKQWL EIDRYA++ VNKLLVGNK D+T  KVV Y  AK FAD +GIPF+ETSAK+++NVEQAF+ MA  IK+RM S  + NN +AS     G  V+  S  GCC
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNTKASVNVSPGHGVSNNSSGGCC 203          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 9.173e-83
Identity = 155/201 (77.11%), Postives = 169/201 (84.08%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT  KVV   TAK FAD +G+PF+ETSAK++TNVEQAFM MAA IK RM    +    R + ++I   PV   SG C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPN-LKIDSTPVKPASGGC 200          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.198e-82
Identity = 154/201 (76.62%), Postives = 169/201 (84.08%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRT+TSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT  KVV   TAK FAD +G+PF+ETSAK++TNVEQAFM MAA IK RM    +    R + ++I   PV   SG C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPN-LKIDSTPVKSASGGC 200          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.043e-82
Identity = 155/201 (77.11%), Postives = 168/201 (83.58%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT  KVV   TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM    +    R + ++I   PV    G C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPN-LKIDSTPVKPAGGGC 200          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.043e-82
Identity = 155/201 (77.11%), Postives = 168/201 (83.58%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT  KVV   TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM    +    R + ++I   PV    G C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPN-LKIDSTPVKPAGGGC 200          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.043e-82
Identity = 155/201 (77.11%), Postives = 168/201 (83.58%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT  KVV   TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM    +    R + ++I   PV    G C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPN-LKIDSTPVKQAGGGC 200          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.946e-82
Identity = 153/201 (76.12%), Postives = 168/201 (83.58%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL+EIDRYA +NVNKLLVGNK DLTA +VVS + AK FA+ +GI F+ETSAK++ NVE+AFM MAA IK RMA+ P    A       +  P    S CC
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAPKAGVKLTPGQQVPSNGGSKCC 201          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.946e-82
Identity = 154/201 (76.62%), Postives = 168/201 (83.58%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT  KVV   TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM    +    R + ++I   PV    G C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPN-LKIDSTPVKPAGGGC 200          
The following BLAST results are available for this feature:
BLAST of EY753649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB1A_PIG2.110e-8778.33Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A ... [more]
RAB1A_LYMST3.046e-8677.45Ras-related protein Rab-1A OS=Lymnaea stagnalis GN... [more]
YPT1_NEUCR7.023e-8374.88GTP-binding protein ypt1 OS=Neurospora crassa GN=y... [more]
RAB1B_MOUSE9.173e-8377.11Ras-related protein Rab-1B OS=Mus musculus GN=Rab1... [more]
RAB1B_RAT1.198e-8276.62Ras-related protein Rab-1B OS=Rattus norvegicus GN... [more]
RAB1B_PONAB2.043e-8277.11Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1... [more]
RAB1B_HUMAN2.043e-8277.11Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1... [more]
RAB1B_BOVIN2.043e-8277.11Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B ... [more]
YPT1_PHYIN5.946e-8276.12Ras-like GTP-binding protein YPT1 OS=Phytophthora ... [more]
RAB1B_MACFA5.946e-8276.62Ras-related protein Rab-1B OS=Macaca fascicularis ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-C08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753649 ID=EY753649; Name=EY753649; organism=Citrus sinensis; type=EST; length=879bp
CGTTTCAGTATTTTCTTTCTTTTTTTTCTTTTTTGTCTTGTCTTCTGTTT
TTGTTGACATTTAATTTCCCGGCGAAACTCATATCACGAGATCTCGCCGA
AGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTTTTTTCTTTTACA
CAAATCTACGACGATGAATCCTGAATATGACTATCTGTTTAAGCTTCTGC
TTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTCTTGAGATTTGCT
GATGATTCATATATTGAGAGTTACATCAGCACCATAGGAGTTGATTTTAA
AATACGCACTGTTGAGCAAGATGGGAAGACCATTAAACTTCAAATTTGGG
ATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGCAGCTACTACCGT
GGGGCACATGGTATCATAATTGTTTATGATGTGACAGACCAAGAGAGCTT
CAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTTATGCTAGTGATA
ATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTCACTGCAAATAAG
GTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGAAATTGGAATACC
TTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGAACAGGCATTCA
TGGCCATGGCTGCTTTCATCAAGGATAGAATGGCAAGTCAACCATCCATG
AACAATGCAAGGGCCTCCACTGTACAGATCAAAGGGCANCCTGTTGCACA
NAAGAGTGGCTGCTGCTCTACTAAGNATCATNGNATATATCTGNCGGGGG
TCTGCTGGACCTATGGGGTGTAATGCTTTTCATCTTTCAGTGAAAACTTG
TCATCTGGACAACTCATAAAAATGTTCTC
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