EY753649

Overview
NameEY753649
Unique NameEY753649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.259e-81
Identity = 150/202 (74.26%), Postives = 172/202 (85.15%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARA-STVQIKGXPVAXKSGCC 766
            M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+YI+SYISTIGVDFKIRT+EQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYD T+ ESFNNVKQWL+EIDRYA+++V KLL+GNK D+  +KVVS ET +A ADE+GIPF+ETSAKDS NVEQAF+ +A  IK +M SQ + N      TVQ+KG P+   +G C
Sbjct:    1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQPIQQNNGGC 202          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.259e-81
Identity = 154/201 (76.62%), Postives = 167/201 (83.08%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQIWDTAGQER RTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT  KVV   TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM    +    R + ++I   PV    G C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPN-LKIDSTPVKQAGGGC 200          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 2.951e-81
Identity = 150/202 (74.26%), Postives = 170/202 (84.16%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRM-ASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNP+Y YLFKLLLIGDSGVGKSCLLLRFADD+Y ES+ISTIGVDFKIRT+E +GKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ +F NV+QWL EIDR+A +NVNKLLVGNK DL A KVV + TAKAFAD + IPF+ETSAK STNVEQAFM MA  IK+R+ ASQP+    +   V     P++ KSGCC
Sbjct:    1 MNPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDKNKVVPGSSAPISPKSGCC 202          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 3.262e-80
Identity = 147/208 (70.67%), Postives = 174/208 (83.65%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFI-KDRMASQPSMNNARASTVQIKGXPVAXK----SGCCST 772
            M+ E+DYLFKLLLIGDS VGKSC LLRFADDSY++SYISTIGVDFKIRTVE +GKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYD+TD ESFNNVKQWL+EIDRYA+D+V KLLVGNKCDL  N+ V    A+A+A E+GIPF+ETSAK+S NVE+AF+AM+A I K +  SQ ++    ++ VQ+KG P+  +    S CCST
Sbjct:    1 MSNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALERKPSNVVQMKGRPIQQEQQKSSRCCST 208          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 5.565e-80
Identity = 149/202 (73.76%), Postives = 168/202 (83.17%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQP-SMNNARASTVQIKGXPVAXKSGCC 766
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT E +GKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQ+SFNNVKQWL EIDRYA + VN+LLVGNK D+   KVV Y  AK FAD + IPF+ETSAKDSTNVEQAF+ M+  IK+RM +   + +NA++S    +G  V+  S  C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQGTNVSQSSSNC 202          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 3.376e-77
Identity = 147/201 (73.13%), Postives = 163/201 (81.09%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            MNP YD LFKLLLIGDSGVGKSCLLLRFADD Y ESYISTIGVDFKI+T+E DGKTIKLQIWDTAGQERF TITSSYYRGAHG ++VYDVTDQES+ NVKQWL EIDR+AS+NVNKLLVGNK DLT  KVV   TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK +M    +    R + ++I   PV    G C
Sbjct:    1 MNPGYDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASGGERPN-LKIDSTPVKPAGGGC 200          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 6.367e-76
Identity = 145/203 (71.43%), Postives = 161/203 (79.31%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMAS-QPSMNNA-RASTVQIKG-XPVAXKSGC 763
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+  DGK IKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD  SFNNVKQW+ EI RYA D+V +LLVGNKCDL   K+V   TA+ +AD +GIPF+ETSAK S NVEQAFM MA+ IK      QP+ N+   A  V+  G  P+  K  C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKLQGGIQPNNNSTYNAHVVKPTGFTPIGKKKKC 203          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 1.017e-73
Identity = 140/205 (68.29%), Postives = 157/205 (76.59%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQ----PSMNNARASTVQIKGXPVAXKSGCC 766
            MN EYDYLFKLLLIG+SGVGKSCLLLRF+DD+Y   YISTIGVDFKI+TVE DGKT+KLQIWDTAGQERFRTITSSYYRG+HGIIIVYDVTDQESFN VK WL EIDRYA+  V KLLVGNKCDL   +VV Y+ AK FAD   +PF+ETSA DSTNVE AF+ MA  IK+ M+ Q     +        V +KG  +    G C
Sbjct:    1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKEDKGNVNLKGQSLTNTGGGC 205          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.997e-70
Identity = 128/175 (73.14%), Postives = 152/175 (86.86%), Query Frame = 2
Query:  161 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMA 685
            +M PE+D+ FK+LLIGDSGVGKSCLLLRFADDS+ +++ISTIGVDFKI+T+  DGKTIKLQIWDTAGQERFRTITSSYYRGA GII+VYD TDQ+SF NVKQW+ EIDRYA +NVNKLLVGNK DL   KVV    AK+FA+  GIPF+ETSAK++TNVE+ F++MA  IK+R+A
Sbjct:    2 SMAPEHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLA 176          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.625e-65
Identity = 118/204 (57.84%), Postives = 153/204 (75.00%), Query Frame = 2
Query:  155 STTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            +T  +  YDYL KLLLIGDSGVGKSCLLLRF++DS+  S+I+TIG+DFKIRT+E +GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF N++ W+  I+++A+D+VNK+L+GNKCD+   KVV     K+ ADE GI F+ETSAK+S NVE+AF+++A  IK RM   P+            G     K  CC
Sbjct:    5 ATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNEQPQVVQPGTNLGANNNKKKACC 208          
The following BLAST results are available for this feature:
BLAST of EY753649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RABD1_ARATH2.259e-8174.26Ras-related protein RABD1 OS=Arabidopsis thaliana ... [more]
RAB1B_PIG2.259e-8176.62Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B ... [more]
RAB1A_DICDI2.951e-8174.26Ras-related protein Rab-1A OS=Dictyostelium discoi... [more]
YPTM1_MAIZE3.262e-8070.67GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=... [more]
YPT1_SCHPO5.565e-8073.76GTP-binding protein ypt1 OS=Schizosaccharomyces po... [more]
RAB1C_HUMAN3.376e-7773.13Putative Ras-related protein Rab-1C OS=Homo sapien... [more]
RAB1B_DICDI6.367e-7671.43Ras-related protein Rab-1B OS=Dictyostelium discoi... [more]
YPT1_YEAST1.017e-7368.29GTP-binding protein YPT1 OS=Saccharomyces cerevisi... [more]
RAB1D_DICDI3.997e-7073.14Ras-related protein Rab-1D OS=Dictyostelium discoi... [more]
RAB8A_DICDI8.625e-6557.84Ras-related protein Rab-8A OS=Dictyostelium discoi... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-C08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753649 ID=EY753649; Name=EY753649; organism=Citrus sinensis; type=EST; length=879bp
CGTTTCAGTATTTTCTTTCTTTTTTTTCTTTTTTGTCTTGTCTTCTGTTT
TTGTTGACATTTAATTTCCCGGCGAAACTCATATCACGAGATCTCGCCGA
AGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTTTTTTCTTTTACA
CAAATCTACGACGATGAATCCTGAATATGACTATCTGTTTAAGCTTCTGC
TTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTCTTGAGATTTGCT
GATGATTCATATATTGAGAGTTACATCAGCACCATAGGAGTTGATTTTAA
AATACGCACTGTTGAGCAAGATGGGAAGACCATTAAACTTCAAATTTGGG
ATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGCAGCTACTACCGT
GGGGCACATGGTATCATAATTGTTTATGATGTGACAGACCAAGAGAGCTT
CAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTTATGCTAGTGATA
ATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTCACTGCAAATAAG
GTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGAAATTGGAATACC
TTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGAACAGGCATTCA
TGGCCATGGCTGCTTTCATCAAGGATAGAATGGCAAGTCAACCATCCATG
AACAATGCAAGGGCCTCCACTGTACAGATCAAAGGGCANCCTGTTGCACA
NAAGAGTGGCTGCTGCTCTACTAAGNATCATNGNATATATCTGNCGGGGG
TCTGCTGGACCTATGGGGTGTAATGCTTTTCATCTTTCAGTGAAAACTTG
TCATCTGGACAACTCATAAAAATGTTCTC
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