EY753649

Overview
NameEY753649
Unique NameEY753649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.971e-57
Identity = 106/193 (54.92%), Postives = 142/193 (73.58%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXP 742
            M   YDYLFKLLLIGDSGVGK+C L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF N++ W+  I+ +AS +V K+++GNKCD    + VS E  +  A   GI FMETSAK + N+E AF  +A  IK +M  +   N+ + S   +K  P
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITP 193          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.971e-57
Identity = 108/190 (56.84%), Postives = 144/190 (75.79%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIK 733
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DFKIRTVE +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A   A E GI F ETSAK S NV++AF ++A  I  +   + S N+++ S+  +K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGNHSKPSSTDLK 190          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 5.068e-57
Identity = 107/190 (56.32%), Postives = 144/190 (75.79%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIK 733
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DFKIRTVE +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A+  A E  I F ETSAK S NV++AF ++A  I  +   + S N+++ S+  +K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGNSSKPSSTDLK 190          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.619e-57
Identity = 103/190 (54.21%), Postives = 145/190 (76.32%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIK 733
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+E SAK S NVE+AF  +A  I  ++  + + +N+  +   +K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVK 190          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.475e-56
Identity = 106/193 (54.92%), Postives = 145/193 (75.13%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXP 742
            M   YDYLFKLLLIGDSGVGK+C+L RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+  I+ +AS +V K+++GNK D+   + VS E  +  A + GI FMETSAK + NVE AF  +A  IK +M  +   N+ + S   +K  P
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITP 193          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.515e-56
Identity = 109/201 (54.23%), Postives = 147/201 (73.13%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMAS-QPSMNNARASTVQIKGXPVAXKSGC 763
            M+ +Y++LFK + +GDSGVGKS +LLRF +D++ ESYISTIGVDFKI+TV  +GK IKLQIWDTAGQERFR   +S YRG H +++VYDVTDQ SF NV +W+ EI+RYA DNV K+++GNK D+ + KVV    A+ FAD + I F ETSAK + N+E AF+++     DR+   +PS  +  +ST+ +K  P + KS C
Sbjct:    1 MSKKYEHLFKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQKVVDPFLAQEFADSLDITFKETSAKQAINIEDAFISLVKLCIDRIEEFKPS--STSSSTIILK-KPQSQKSNC 198          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.515e-56
Identity = 106/190 (55.79%), Postives = 143/190 (75.26%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIK 733
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DFKIRTV+ +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A+  A E  I F ETSAK S NV++AF ++A  I  +   + S  N++ S+  +K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGTNSKPSSTGLK 190          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.285e-56
Identity = 106/190 (55.79%), Postives = 141/190 (74.21%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIK 733
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DFKIRTV+ +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A   A E GI F ETSAK S NV++AF ++A  I  +   + S N  +  +  +K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLK 190          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.291e-56
Identity = 105/190 (55.26%), Postives = 141/190 (74.21%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIK 733
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DF+IRTV+ +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A   A E GI F ETSAK S NV++AF ++A  I  +   +   NN +  +  +K
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLK 190          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.057e-54
Identity = 103/200 (51.50%), Postives = 145/200 (72.50%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQP--SMNNARASTVQI-KGXPVAXKSGCC 766
            YD + K+LLIGDSGVGKSCLL+RF +D +  S+I+TIG+DFKI+TV+ +GK +KLQ+WDTAGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW   ++ +A+D    LLVGNK D+   +VV+ +  +A A E+GIPF+E+SAK+  NV + F  +A  I++++ S     + N +   + I  G   + KS CC
Sbjct:   17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISINSGSGNSSKSNCC 215          
The following BLAST results are available for this feature:
BLAST of EY753649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB8A_CHICK2.971e-5754.92Ras-related protein Rab-8A OS=Gallus gallus GN=RAB... [more]
RAB13_MESAU2.971e-5756.84Ras-related protein Rab-13 OS=Mesocricetus auratus... [more]
RAB13_RAT5.068e-5756.32Ras-related protein Rab-13 OS=Rattus norvegicus GN... [more]
RAB8B_BOVIN6.619e-5754.21Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B ... [more]
RAB8A_PONAB1.475e-5654.92Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8... [more]
RABA_DICDI2.515e-5654.23Ras-related protein RabA OS=Dictyostelium discoide... [more]
RAB13_MOUSE2.515e-5655.79Ras-related protein Rab-13 OS=Mus musculus GN=Rab1... [more]
RAB13_HUMAN3.285e-5655.79Ras-related protein Rab-13 OS=Homo sapiens GN=RAB1... [more]
RAB13_BOVIN4.291e-5655.26Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 ... [more]
SEC4_YEAST1.057e-5451.50Ras-related protein SEC4 OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-C08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753649 ID=EY753649; Name=EY753649; organism=Citrus sinensis; type=EST; length=879bp
CGTTTCAGTATTTTCTTTCTTTTTTTTCTTTTTTGTCTTGTCTTCTGTTT
TTGTTGACATTTAATTTCCCGGCGAAACTCATATCACGAGATCTCGCCGA
AGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTTTTTTCTTTTACA
CAAATCTACGACGATGAATCCTGAATATGACTATCTGTTTAAGCTTCTGC
TTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTCTTGAGATTTGCT
GATGATTCATATATTGAGAGTTACATCAGCACCATAGGAGTTGATTTTAA
AATACGCACTGTTGAGCAAGATGGGAAGACCATTAAACTTCAAATTTGGG
ATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGCAGCTACTACCGT
GGGGCACATGGTATCATAATTGTTTATGATGTGACAGACCAAGAGAGCTT
CAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTTATGCTAGTGATA
ATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTCACTGCAAATAAG
GTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGAAATTGGAATACC
TTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGAACAGGCATTCA
TGGCCATGGCTGCTTTCATCAAGGATAGAATGGCAAGTCAACCATCCATG
AACAATGCAAGGGCCTCCACTGTACAGATCAAAGGGCANCCTGTTGCACA
NAAGAGTGGCTGCTGCTCTACTAAGNATCATNGNATATATCTGNCGGGGG
TCTGCTGGACCTATGGGGTGTAATGCTTTTCATCTTTCAGTGAAAACTTG
TCATCTGGACAACTCATAAAAATGTTCTC
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