EY753615

Overview
NameEY753615
Unique NameEY753615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP6 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG PE=3 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.985e-41
Identity = 88/175 (50.29%), Postives = 121/175 (69.14%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKF 731
            L+ +R+RI SV+NT+KITEAM+LVAAAKVRRAQE V++ RPF++ L +VL  + ++LQ E++D+PL+             +GDRGLCGG+N+N+I++AE R  EL   GLDY  + VG+K   YF RR   P++    G   +PTA+EA  IAD  +SLF S   D+VEL+YTKF
Sbjct:    4 LKAIRDRIKSVRNTRKITEAMRLVAAAKVRRAQEQVLSTRPFADRLAQVLAGLQQRLQFENVDLPLLQRREVKTVALLVVSGDRGLCGGYNSNVIRRAEQRARELSAQGLDYKFVIVGRKAGQYFQRREQ-PIEATYSGLEQIPTAQEANDIADQLLSLFLSGTVDRVELVYTKF 177          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_SYNY3 (ATP synthase gamma chain OS=Synechocystis sp. (strain PCC 6803) GN=atpG PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.935e-40
Identity = 88/179 (49.16%), Postives = 115/179 (64.25%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWLS 746
            L+ +R+RI SVKNT+KITEAM+LVAAAKVRRAQE V++ RPF++ L +VLYN+  +L   + ++PL              TGDRGLCGG+N N IK+AE R  ELK  G+   ++ VG K   YF RR Y     +     +P A EA  IAD  V+LF SE  D+VEL+YT+F S +S
Sbjct:    4 LKAIRDRIQSVKNTKKITEAMRLVAAAKVRRAQEQVLSTRPFADALAQVLYNLQNRLSFAETELPLFEQREPKAVALLVVTGDRGLCGGYNVNAIKRAEQRAKELKNQGIAVKLVLVGSKAKQYFGRRDYDVAASYANLEQIPNASEAAQIADSLVALFVSETVDRVELIYTRFVSLIS 182          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_PHATR (ATP synthase gamma chain, chloroplastic OS=Phaeodactylum tricornutum GN=ATPC PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.527e-40
Identity = 96/177 (54.24%), Postives = 121/177 (68.36%), Query Frame = 3
Query:  219 LRERIDSVKNTQKITEAMKLVAAA-KVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWLS 746
            +R+RI SVKNT+KIT AMKLV AA KVRRAQ+AV+  RPFSETL  V   + ++L  E +D+PL+             TGDRGLCGG+N+ +IKKAEAR  ELK  G++  +I VGKKG AYF RR + P+ +  E G  PTAK+A  IA++  S F S ESD VELLYTKF S ++
Sbjct:   61 IRDRITSVKNTRKITMAMKLVRAAPKVRRAQDAVLATRPFSETLQSVFGGLIQRLGGESVDLPLLTEREVKKVTLLVITGDRGLCGGYNSFMIKKAEARFNELKKNGVEADLILVGKKGIAYFERRGF-PIRKKYETGQNPTAKQALAIAEEVSSTFLSGESDAVELLYTKFVSLIA 236          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_SYNSC (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9605) GN=atpG PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.254e-39
Identity = 87/175 (49.71%), Postives = 115/175 (65.71%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKF 731
            L+E+R+RI SVKNT+KITEAM+LVAAAKVRRAQE V+  RPF++ L  +L N+  ++  ED   PL+             TGDRGLCGG+N NIIK+ E R AELK  G D  ++ +G K   YF RR Y P+     G   +PTA EA TI+ D ++ F +E +D+VEL++TKF
Sbjct:    4 LKEIRDRIKSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARILENLQSRMGFEDAASPLMQQRNVETITLVAVTGDRGLCGGYNANIIKRTEQRFAELKGKGFDVKLLLIGTKAIGYFTRRDY-PIQATFSGLEQVPTADEANTISTDLLAEFLAESTDRVELIFTKF 177          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_ODOSI (ATP synthase gamma chain, chloroplastic OS=Odontella sinensis GN=ATPC PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.139e-39
Identity = 99/207 (47.83%), Postives = 129/207 (62.32%), Query Frame = 3
Query:  156 ATPNNPSRSSSVTPIHCGLRE----------LRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKFGSWLS 746
            AT N  S SSS  P H   R           +R+RI SVKNT+KIT AMKLVAAAKVRRAQ+AV+  RPFSETL  V   +  ++  E +D+PL+             TGDRGLCGG+N+ +IKKAEAR  ELK  G+   ++ +GKKG  YF RR Y P+ +  E G  P +K+A  I+++ ++ + S ESD VELLYTKF S ++
Sbjct:   33 ATSNVFSESSS--PAHRNRRATIVMDGKANAIRDRITSVKNTKKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIARMGGEALDLPLLTQREVSKVTLVVITGDRGLCGGYNSFMIKKAEARFNELKDQGVACDMVLIGKKGITYFQRRGY-PIRKTFETGQNPDSKQALAISEELLNTYLSGESDAVELLYTKFISLIA 236          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS3 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9311) GN=atpG PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.794e-39
Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKF 731
            L+E+R+RI SVKNT+KITEAM+LVAAAKVRRAQE V+  RPF++ L  +L N+  +++ ED D PL+             TGDRGLCGG+N+NIIK+ E R AEL+  G    ++ +G+K  +YF  R Y     F     +PTA EA +IA +  + F SE SD+VE+++TKF
Sbjct:    4 LKEIRDRIKSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARLLENLQARMRFEDADAPLLEQRAVQTITLMAVTGDRGLCGGYNSNIIKRTEKRFAELQRQGYKVALVLIGRKAISYFTNRNYPIQATFTGLEQVPTADEAGSIASEIFAEFLSETSDRVEIIFTKF 177          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_PROMP (ATP synthase gamma chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=atpG PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.129e-39
Identity = 88/176 (50.00%), Postives = 115/176 (65.34%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRP--YIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKF 731
            L+E+R+RI SVKNT+KITEAM+LVAAAKVRRAQ+ V+  RPF++ L  VL NI  ++Q E +D PL+             T DRGLCGG+N NIIKK E R AEL   G +  +I VGKK   YF  R   Y+    F E   +PTA +++ I +D ++ F SE SD+VE++YTKF
Sbjct:    4 LKEIRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLKSRPFADKLARVLENIQSRVQFEAVDSPLLSKRNVKKISLVCITADRGLCGGYNTNIIKKVEIRYAELIKQGYEPNLILVGKKAIGYFQNRKDRYVIKSTFKELEQVPTAIDSEGITNDVLAEFLSENSDRVEIIYTKF 179          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_PROM9 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9312) GN=atpG PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.129e-39
Identity = 88/176 (50.00%), Postives = 115/176 (65.34%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRP--YIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKF 731
            L+E+R+RI SVKNT+KITEAM+LVAAAKVRRAQ+ V+  RPF++ L  VL NI  ++Q E +D PL+             T DRGLCGG+N NIIKK E R AEL   G +  +I VGKK   YF  R   YI    F E   +PTAK+++ I  + ++ F SE +D+VE++YTKF
Sbjct:    4 LKEIRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLKSRPFADKLARVLENIQSRVQFEAVDSPLLSKRDVKTISLVCITADRGLCGGYNTNIIKKVEIRYAELIKQGYEPNLILVGKKAIGYFQNRKDRYIIKTTFKELEQVPTAKDSEGITSEVLAEFLSENADRVEIIYTKF 179          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_PROM0 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9301) GN=atpG PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.387e-38
Identity = 86/176 (48.86%), Postives = 114/176 (64.77%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRP--YIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKF 731
            L+E+R+RI SVKNT+KITEAM+LVAAAKVRRAQ+ V+  RPF++ L  VL NI  ++Q E +D PL+             T DRGLCGG+N NIIKK E R AEL   G    +I VGKK   YF  R   Y+    F E   +PT K+++ + ++ ++ F SE SD+VE++YTKF
Sbjct:    4 LKEIRDRIVSVKNTRKITEAMRLVAAAKVRRAQDQVLKSRPFADKLARVLENIQSRVQFEAVDSPLLSKREVKSISLVCITADRGLCGGYNTNIIKKVEIRYAELVKQGYQPNLILVGKKAIGYFQNRKDRYVIKSTFKELEQVPTVKDSEGVTNEILAEFLSENSDRVEIIYTKF 179          
BLAST of EY753615 vs. ExPASy Swiss-Prot
Match: ATPG_SYNPW (ATP synthase gamma chain OS=Synechococcus sp. (strain WH7803) GN=atpG PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.365e-38
Identity = 81/174 (46.55%), Postives = 115/174 (66.09%), Query Frame = 3
Query:  210 LRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQNEDIDVPLIXXXXXXXXXXXXXTGDRGLCGGFNNNIIKKAEARIAELKTLGLDYTIISVGKKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDXVSLFCSEESDKVELLYTKF 731
            L+E+R+RI SVKNT+KITEAM+LVAAAKVRRAQE V+  RPF++ L  +L N+  +++ ED D PL+             TGDRGLCGG+N NIIK+ E R  EL++ G    ++ +G+K  +YF  R Y     F     +PTA EA ++A++  + F SE +D+VE+++TKF
Sbjct:    4 LKEIRDRIKSVKNTRKITEAMRLVAAAKVRRAQEQVLRSRPFADRLARLLENLQARMRFEDADAPLLEDRPLETVTLMAVTGDRGLCGGYNANIIKRTEQRFEELQSKGYKVNLVLIGRKAISYFTNRSYPIQATFTGLEQVPTADEAGSVANEVFAEFLSETTDRVEIIFTKF 177          
The following BLAST results are available for this feature:
BLAST of EY753615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_SYNP62.985e-4150.29ATP synthase gamma chain OS=Synechococcus sp. (str... [more]
ATPG_SYNY31.935e-4049.16ATP synthase gamma chain OS=Synechocystis sp. (str... [more]
ATPG_PHATR2.527e-4054.24ATP synthase gamma chain, chloroplastic OS=Phaeoda... [more]
ATPG_SYNSC1.254e-3949.71ATP synthase gamma chain OS=Synechococcus sp. (str... [more]
ATPG_ODOSI2.139e-3947.83ATP synthase gamma chain, chloroplastic OS=Odontel... [more]
ATPG_SYNS32.794e-3948.28ATP synthase gamma chain OS=Synechococcus sp. (str... [more]
ATPG_PROMP8.129e-3950.00ATP synthase gamma chain OS=Prochlorococcus marinu... [more]
ATPG_PROM98.129e-3950.00ATP synthase gamma chain OS=Prochlorococcus marinu... [more]
ATPG_PROM01.387e-3848.86ATP synthase gamma chain OS=Prochlorococcus marinu... [more]
ATPG_SYNPW2.365e-3846.55ATP synthase gamma chain OS=Synechococcus sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-H05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753615 ID=EY753615; Name=EY753615; organism=Citrus sinensis; type=EST; length=878bp
TCTTTCCCTTCTCTTTGAGTGCTTAGACTCTCACCTTGAGCTCCAACAAT
CCGTTATCAGTTATCACCATGTCTTGCTCAAACCTACCTGTGTGTCGTGA
CACTTCTTCGCTCTCTTTTGGCTCATTTCTCAACCCATTTAGGCCTCCTC
ACAATGCAACCCCCAACAACCCTTCTAGATCTTCATCAGTTACTCCAATT
CATTGTGGTCTCCGCGAGCTCAGAGAACGTATTGATTCTGTAAAGAACAC
ACAGAAGATCACCGAGGCCATGAAGCTTGTGGCCGCTGCTAAAGTCAGAA
GAGCTCAGGAAGCTGTTGTCAATGGCAGGCCTTTCTCTGAAACTCTTGTT
GAGGTTCTTTACAACATCAATGAGCAGCTTCAAAATGAAGACATAGATGT
TCCTTTGATCAAAGTTAGACCTGTCAAGAAAGTTGCTTTGGTTGTTGTCA
CTGGTGATCGTGGTCTTTGTGGTGGTTTCAACAACAATATTATTAAGAAA
GCTGAAGCGAGAATTGCAGAATTGAAGACTCTTGGACTTGATTACACTAT
TATTAGTGTTGGTAAGAAGGGTAATGCATATTTCCTTCGTAGGCCTTATA
TTCCTGTTGATAGATTTCTTGAGGGAGGTTCATTACCTACTGCTAAAGAA
GCTCAGACTATAGCAGATGATGNTGTTTCACTCTTTTGTAGTGAAGAAAG
TGACAAGGTGGAGCTTTTATACACAAAGTTTGGGTCTTGGTTAAGTCTGA
TCCTGTGNATCACACTTTGCTNCACTATCACCGAGGGGAGAGATTGTGAT
GGGAATGGGGTTNNGCGTGATGCTGCTGAGGATGAATTCTTTGATTGACA
CTAAGGAGGAAATTTACTGTTGAAAAAA
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