EY753608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOD_BACHD (RNA polymerase sigma factor rpoD OS=Bacillus halodurans GN=sigA PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.746e-17 Identity = 41/115 (35.65%), Postives = 73/115 (63.48%), Query Frame = 3 Query: 327 REELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIENAKYTGLS 671 + L ++ LV+ +A+ Y G G+ F DL+Q GN+G+++ E+FD+ +G+KFSTY +WIR++I++ +A AR I+IP + I+K+ + ++ L G+ P E A+ L+ Sbjct: 136 KRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDYNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPSPEEVAEEMDLT 250
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOS_COXBU (RNA polymerase sigma factor rpoS OS=Coxiella burnetii GN=rpoS PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16 Identity = 39/108 (36.11%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 327 REELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTN--SHGKYPEDI 644 R+++I++ LV+ +AR+Y G+PF DL++ GN+G+L E+FD RG++FSTY +WIR++I + + +R +++P + +E++ + K LT H PED+ Sbjct: 114 RKQMIEANLRLVVKIARHYVNRGLPFLDLIEEGNLGLLTAVEKFDPERGFRFSTYATWWIRQTIERAIMNQSRTVRLPIHVIKELNVYLRTAKKLTQEVDHEATPEDV 221
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOD_XYLFT (RNA polymerase sigma factor rpoD OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=rpoD PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16 Identity = 38/110 (34.55%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 327 REELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIENAK 656 ++E++++ LV+ +A+ Y G+ F DL+Q GN+G+++ +F+H RG+KFSTY +WIR++I++ +A AR I+IP + I+K+ + + + G+ E AK Sbjct: 380 KKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVCKFEHRRGFKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFGREATPEELAK 489
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOD_XYLFA (RNA polymerase sigma factor rpoD OS=Xylella fastidiosa GN=rpoD PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16 Identity = 38/110 (34.55%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 327 REELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIENAK 656 ++E++++ LV+ +A+ Y G+ F DL+Q GN+G+++ +F+H RG+KFSTY +WIR++I++ +A AR I+IP + I+K+ + + + G+ E AK Sbjct: 380 KKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVCKFEHRRGFKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFGREATPEELAK 489
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOD_ENTFA (RNA polymerase sigma factor rpoD OS=Enterococcus faecalis GN=rpoD PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16 Identity = 38/103 (36.89%), Postives = 69/103 (66.99%), Query Frame = 3 Query: 327 REELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYP 635 ++ L ++ LV+ +A+ Y G G+ F DL+Q GN+G+++ E+FD+ +G+KFSTY +WIR++I++ +A AR I+IP + I+K+ + ++ L G+ P Sbjct: 132 KQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREP 234
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOD_COXBU (RNA polymerase sigma factor rpoD OS=Coxiella burnetii GN=rpoD PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16 Identity = 36/100 (36.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 327 REELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHG 626 ++E+I++ LV+ +A+ Y G+ F DL+Q GN+G+++ ++F++ RGYKFSTY +WIR++I++ +A AR I+IP + I+K+ + + + G Sbjct: 459 KKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQILQETG 558
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOD_STRR6 (RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rpoD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16 Identity = 37/103 (35.92%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 327 REELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYP 635 ++ L ++ LV+ +A+ Y G G+ F DL+Q GN+G+++ ++FD+++G+KFSTY +WIR++I++ +A AR I+IP + I+K+ + ++ L G+ P Sbjct: 132 KQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDP 234
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOD_STRPN (RNA polymerase sigma factor rpoD OS=Streptococcus pneumoniae GN=rpoD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16 Identity = 37/103 (35.92%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 327 REELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYP 635 ++ L ++ LV+ +A+ Y G G+ F DL+Q GN+G+++ ++FD+++G+KFSTY +WIR++I++ +A AR I+IP + I+K+ + ++ L G+ P Sbjct: 132 KQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDP 234
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOD_STRMU (RNA polymerase sigma factor rpoD OS=Streptococcus mutans GN=rpoD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16 Identity = 37/103 (35.92%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 327 REELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYP 635 ++ L ++ LV+ +A+ Y G G+ F DL+Q GN+G+++ ++FD+++G+KFSTY +WIR++I++ +A AR I+IP + I+K+ + ++ L G+ P Sbjct: 134 KQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDP 236
BLAST of EY753608 vs. ExPASy Swiss-Prot
Match: RPOD_MYCGE (RNA polymerase sigma factor rpoD OS=Mycoplasma genitalium GN=rpoD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16 Identity = 41/115 (35.65%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 321 YCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKYPEDIENAKYTG 665 Y +L+ S LV+ +A+ + G+ F+DL+Q GN+G+L+ +F+ + G KFSTY +WI+++I++ +A AR ++IP + I+++ KA +AL G+ P D E A+ G Sbjct: 245 YAINQLVTSNLRLVVSIAKKHLERGLDFNDLIQEGNLGLLKAISKFNWSLGNKFSTYATWWIKQAITRAIADQARTVRIPVHMVETINRLAKAERALYQELGREPTDEELAEKMG 359 The following BLAST results are available for this feature:
BLAST of EY753608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753608 ID=EY753608; Name=EY753608; organism=Citrus sinensis; type=EST; length=879bpback to top |