EY753602

Overview
NameEY753602
Unique NameEY753602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC3_HUMAN (Ras-related C3 botulinum toxin substrate 3 OS=Homo sapiens GN=RAC3 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.910e-53
Identity = 102/158 (64.56%), Postives = 119/158 (75.32%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VDG  VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSL+S AS+ENV  KW PE+RH+ P  PI+LVGTKLDLRDDK     +      PIT  QG      IGS  Y+ CS+ T
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC2_HUMAN (Ras-related C3 botulinum toxin substrate 2 OS=Homo sapiens GN=RAC2 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.910e-53
Identity = 109/184 (59.24%), Postives = 129/184 (70.11%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGL--QPSKQKKR 762
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VD   VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSL+S ASYENV  KW PE+RH+ P  PIILVGTKLDLRDDK     +      PIT  QG    + I S  Y+ CS+ T       F    +  L  QP++Q+KR
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCPQPTRQQKR 187          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC2_MOUSE (Ras-related C3 botulinum toxin substrate 2 OS=Mus musculus GN=Rac2 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.800e-53
Identity = 109/184 (59.24%), Postives = 129/184 (70.11%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGL--QPSKQKKR 762
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VD   VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSL+S ASYENV  KW PE+RH+ P  PIILVGTKLDLRDDK     +      PIT  QG    + I S  Y+ CS+ T       F    +  L  QP++Q+KR
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKDIDSVKYLECSALTQRGLKTVFDEAIRAVLCPQPTRQQKR 187          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC2_BOVIN (Ras-related C3 botulinum toxin substrate 2 OS=Bos taurus GN=RAC2 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.963e-53
Identity = 102/158 (64.56%), Postives = 118/158 (74.68%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VD   VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSL+S ASYENV  KW PE+RH+ P  PIILVGTKLDLRDDK     +      PIT  QG    + I S  Y+ CS+ T
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC2_DROME (Ras-related protein Rac2 OS=Drosophila melanogaster GN=Rac2 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.482e-53
Identity = 100/158 (63.29%), Postives = 120/158 (75.95%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VD   +NLGLWDTAGQEDY+RLRPLSY   DVF++ FSL++ AS+ENV  KW PE+RH+ P VPIILVGTKLDLRDDKQ    +      PIT  QG    + I +  Y+ CS+ T
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLDLRDDKQTIEKLKDKKLTPITYPQGLAMAKEIAAVKYLECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC1_DROME (Ras-related protein Rac1 OS=Drosophila melanogaster GN=Rac1 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.463e-52
Identity = 99/158 (62.66%), Postives = 119/158 (75.32%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VD   +NLGLWDTAGQEDY+RLRPLSY   DVF++ FSL++ AS+ENV  KW PE+RH+ P  PIILVGTKLDLRDDK     +      PIT  QG    + IG+  Y+ CS+ T
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKKLAPITYPQGLAMAKEIGAVKYLECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC2_CAVPO (Ras-related C3 botulinum toxin substrate 2 OS=Cavia porcellus GN=RAC2 PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.222e-51
Identity = 99/158 (62.66%), Postives = 118/158 (74.68%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VD   VNLGLWDTAGQEDY+RLRPLSY   DVF++ FSL+S ASYENV   W P++RH+ P  PIIL+GTKLDLRDDK+    +      PIT  QG    + I S  Y+ CS+ T
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVHANWYPKVRHHCPSTPIILLGTKLDLRDDKETIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC1A_DICDI (Rho-related protein rac1A OS=Dictyostelium discoideum GN=rac1A PE=1 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 2.723e-51
Identity = 103/185 (55.68%), Postives = 130/185 (70.27%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK--QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRERS 771
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VDG  +NLGLWDTAGQEDY+RLRPLSY   DVF++ FS+IS +S+ENV  KW PE+ H+AP VPIILVGTKLD+R+DK  Q  +      PI+  QG    + I +  Y+ CS+ T       F    +  + P   KK++ S
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSFENVNGKWHPEICHHAPNVPIILVGTKLDMREDKETQDRLKEKKLYPISYEQGLAKMKEINAVKYLECSALTQKGLKTVFDEAIRAVINPPLSKKKKSS 188          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC1B_DICDI (Rho-related protein rac1B OS=Dictyostelium discoideum GN=rac1B PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.645e-51
Identity = 101/185 (54.59%), Postives = 131/185 (70.81%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK--QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRERS 771
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VDG  +NLGLWDTAGQEDY+RLRPLSY   DVF++ FS++S AS+ENV  KW PE+ H+AP VPIILVGTKLD+R+D+  Q  +      P++  QG    + I +  Y+ CS+ T       F    +  + P+ +KK + S
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIVSPASFENVNGKWHPEICHHAPNVPIILVGTKLDMREDRDTQDRLKEKKLYPVSYEQGLSKMKEINAVKYLECSALTQKGLKTVFDEAIRSVINPTLKKKPKSS 188          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC1C_DICDI (Rho-related protein rac1C OS=Dictyostelium discoideum GN=rac1C PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 7.924e-51
Identity = 101/185 (54.59%), Postives = 131/185 (70.81%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK--QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRERS 771
            IKCV VGDGAVGKTC+LISYT+N FP +Y+PTVFDN+SANV+VDG  +NLGLWDTAGQEDY+RLRPLSY   DVF++ FS+IS +SYENV+ KW PE+ H+AP VPIILVGTK+D+R+DK  Q  +      P++  QG    + I +  Y+ CS+ T       F    +  + P  +K + +S
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIISPSSYENVSGKWGPEVFHHAPNVPIILVGTKMDMREDKETQDRLKEKKLYPVSYEQGLLKMKEINAFKYLECSALTQKGLKTVFDEAIRSVINPPVKKSKSKS 188          
The following BLAST results are available for this feature:
BLAST of EY753602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAC3_HUMAN2.910e-5364.56Ras-related C3 botulinum toxin substrate 3 OS=Homo... [more]
RAC2_HUMAN2.910e-5359.24Ras-related C3 botulinum toxin substrate 2 OS=Homo... [more]
RAC2_MOUSE3.800e-5359.24Ras-related C3 botulinum toxin substrate 2 OS=Mus ... [more]
RAC2_BOVIN4.963e-5364.56Ras-related C3 botulinum toxin substrate 2 OS=Bos ... [more]
RAC2_DROME6.482e-5363.29Ras-related protein Rac2 OS=Drosophila melanogaste... [more]
RAC1_DROME2.463e-5262.66Ras-related protein Rac1 OS=Drosophila melanogaste... [more]
RAC2_CAVPO1.222e-5162.66Ras-related C3 botulinum toxin substrate 2 OS=Cavi... [more]
RAC1A_DICDI2.723e-5155.68Rho-related protein rac1A OS=Dictyostelium discoid... [more]
RAC1B_DICDI4.645e-5154.59Rho-related protein rac1B OS=Dictyostelium discoid... [more]
RAC1C_DICDI7.924e-5154.59Rho-related protein rac1C OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-G04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753602 ID=EY753602; Name=EY753602; organism=Citrus sinensis; type=EST; length=795bp
CTGTCTCTTTGCAGATTAGGGTTTAATTACCTTCGCTACCTTAATTCAAG
ACTTCTTTTCACTCAATTCCTAAGCTCCCGTTGACGAACTGAGTTGTTCT
CTTTTGGTCTTCGAAATGAGTGAAGTCTGAGGCAAGAAGTGTACGTAAAG
AACCTGAGCAGTCTTCCAAGGGCATTGTCGGAATAAACTAAAAAAGAGAA
TAGAGATCTGGTGGCGCAAATGAGCGCGTCGAGGTTCATAAAGTGCGTCA
CTGTCGGTGACGGCGCCGTCGGAAAAACTTGCATGCTTATTTCTTACACC
AGCAACACTTTCCCAACGGACTATGTGCCAACTGTCTTTGACAATTTCAG
TGCGAATGTGGTTGTTGATGGGAGTACGGTCAACTTAGGGTTATGGGACA
CTGCTGGTCAGGAGGATTACAATAGATTGAGACCGTTAAGTTATAGAGGA
GCTGATGTGTTTATTCTTGCATTCTCACTGATTAGCAAGGCCAGCTATGA
AAATGTCGCCAAGAAGTGGATTCCAGAACTGAGGCACTATGCGCCCGGTG
TTCCAATAATTCTTGTTGGGACTAAGCTAGATCTTCGGGATGATAAGCAG
TTCTTTATTGATCATNCAGGTGCAGTACCAATTACTACAGCTCAGGGAGA
GGAACCTGAGGAACTGATTGGATCTCCTGCGTACATCGGATGTAGTTCAA
AGACCAACAGTTTTTGATGCTGCTTTAAAGGGGGGCTTCAGCCTTCAAAG
CAAAAGAAAAGAGAAAGAAGTCCCTAGGGCTTGCTCCTACTGTGA
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