EY753598

Overview
NameEY753598
Unique NameEY753598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_CHRVO (Glycine dehydrogenase [decarboxylating] OS=Chromobacterium violaceum GN=gcvP PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.484e-40
Identity = 90/188 (47.87%), Postives = 118/188 (62.77%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA R+H LA  FA  +K+ G   V    FFDTV+V    A AI +AA     NLR V    +  +F E  T  D+ KL  +F G    P   A+L      AIP+ L RES  LTHPVFN +H+EHE+LRY+  L++++L++ HSMI LG CTMK+N T+EM+P+TWP FAN+HPFAP +Q  GY E+
Sbjct:  356 IAARIHRLAAIFAHAVKEAGGKLVFDR-FFDTVQVDAPKADAIYAAALAAGYNLRRVGKTVLGVAFHEAATESDLAKLIELFTGK---PADIAALDAAALDAIPAALKRESAILTHPVFNTHHSEHEMLRYMKKLENRDLAMNHSMISLGSCTMKLNATSEMIPITWPEFANMHPFAPREQTVGYLEL 539          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_BURTA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gcvP PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.484e-40
Identity = 95/198 (47.98%), Postives = 122/198 (61.62%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV----KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA---GGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMFN 573
            TIA RV+ +A   A G+K+LG   V    FFDT+ +    + A  HA+A+A     +NLR V    V  S DETTT  D+ +L  VFA   GG +    A         A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLG CTMK+N T+EM+PVTWP F  IHPFAPA+Q  GY EM +
Sbjct:  372 TIALRVNRIAALVAAGVKQLGFATVNDT-FFDTLTIDTGARTAQIHALANAK---RINLRRVSDTRVGISVDETTTRGDLAELLGVFAQAAGGTAPDVDALDAGLADTAALPAGLQRTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMID 565          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_XANCP (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris GN=gcvP PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.856e-40
Identity = 87/188 (46.28%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA+R H LA   A  L+  G     G  FFDT+ VK  DA AI + A+   +NLR +DS  V  S DET+T  DV  L  +F     +    A+ A+    A+P G+ R S +L HPVFN +H+EHELLRY+  L  K+L++  +MIPLG CTMK+N T EM+PVTWP F  IHP AP +Q+ GY ++
Sbjct:  361 IARRTHRLAAILAAALRSAGVTV--GEHFFDTLHVKAIDADAIHAKAHAAGINLRAIDSEAVGISLDETSTRADVVALAQLFGAQADIDALDAATAD----ALPQGMRRTSAFLQHPVFNTHHSEHELLRYMRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFGAIHPLAPPEQSAGYAQL 542          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_XANC8 (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gcvP PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.856e-40
Identity = 87/188 (46.28%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA+R H LA   A  L+  G     G  FFDT+ VK  DA AI + A+   +NLR +DS  V  S DET+T  DV  L  +F     +    A+ A+    A+P G+ R S +L HPVFN +H+EHELLRY+  L  K+L++  +MIPLG CTMK+N T EM+PVTWP F  IHP AP +Q+ GY ++
Sbjct:  361 IARRTHRLAAILAAALRSAGVTV--GEHFFDTLHVKAIDADAIHAKAHAAGINLRAIDSEAVGISLDETSTRADVVALAQLFGAQADIDALDAATAD----ALPQGMRRTSAFLQHPVFNTHHSEHELLRYMRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFGAIHPLAPPEQSAGYAQL 542          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_VIBPA (Glycine dehydrogenase [decarboxylating] OS=Vibrio parahaemolyticus GN=gcvP PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.856e-40
Identity = 85/187 (45.45%), Postives = 116/187 (62.03%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGY 558
            TIA+R H +    A GL K G  E+    FFDT+ +   +    + + A   ++NLRV+    +  S DETTT+ DV+ LF +F   + V   +  +A     AIP  L R S YLTHPVFN YH+E +++RY+  L++K+ SL H MIPLG CTMK+N   EM+P+TWP F +IHPFAPA+QA GY
Sbjct:  357 TIARRTHHMTAILAAGLTK-GGFELAHNSFFDTITINTGEKTQDLYTKALAADINLRVLPGK-LGISLDETTTVADVEALFAIFGVKEDVTALSTEVAGNEFAAIPEALRRTSEYLTHPVFNTYHSETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGSIHPFAPAEQAAGY 541          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_BURS3 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia sp. (strain 383) GN=gcvP PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.856e-40
Identity = 94/198 (47.47%), Postives = 119/198 (60.10%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV----KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA---GGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMFN 573
            TIA RV+ +A   A G+K+LG   V    FFDT+ +    + A  H  A A     +NLR V    V  S DETTT +D+  L  VFA   GG +    A         A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLG CTMK+N T+EM+PVTWP F  IHPFAPA+Q  GY EM +
Sbjct:  372 TIALRVNRIAALLAAGVKQLGFATVNDT-FFDTLTIDTGARTAQVHEFAKAK---RINLRRVSDTQVGVSVDETTTRDDLADLLAVFAQAAGGTAPAVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGGIHPFAPAEQTVGYREMID 565          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_VIBVY (Glycine dehydrogenase [decarboxylating] OS=Vibrio vulnificus (strain YJ016) GN=gcvP PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.648e-40
Identity = 84/187 (44.92%), Postives = 117/187 (62.57%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGY 558
            TIA+R H +    A GL K G  E+    FFDT+ +   D   A+ + A   ++NLR++D   +  SFDETTT+ D+D LF +F   +SV   +  +A     AIP    R S +L+HPVFN +H+E +++RY+  L++K+ SL H MIPLG CTMK+N   EM+PVTWP F  +HPFAP +QA GY
Sbjct:  357 TIARRTHHMTAILAAGLTKSG-YELAHNAFFDTITINTGDKTQALYAKAQAADINLRLLDGQ-IGISFDETTTVADIDALFAIFDVKESVNALSTDIAGNEFAAIPEACRRTSRFLSHPVFNTHHSETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGALHPFAPIEQAAGY 541          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB9 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS195) GN=gcvP PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.648e-40
Identity = 86/192 (44.79%), Postives = 118/192 (61.46%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            TIA R++  A   A GL+  G V +    +FDT+ +K  D  A+ + A   EMNLR     TV  S DETT   D+D LF V  G   G  V    A +  +   +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LG CTMK+N   EM+PV+WP FAN+HPF+P DQA+GY ++
Sbjct:  359 TIASRINRFADILAAGLQAKG-VSLVNSTWFDTISIKGLDVAAVNARALAAEMNLRFDTDGTVGISLDETTLRTDIDALFDVILGAGHGLDVAALDAQIVSQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFSPLDQAKGYTQL 549          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_HUMAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Homo sapiens GN=GLDC PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 7.648e-40
Identity = 83/190 (43.68%), Postives = 118/190 (62.11%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMF 570
            IA+RVH      + GLK+ G  ++Q   FFDT+K++C      +   A + ++N R+ +  T+  S DET   +D+D L  +F    S    A S+ EE      S   R SP+LTH VFN YH+E  ++RY+  L++K++SL HSMIPLG CTMK+N ++E+ P+TW  FANIHPF P DQAQGY ++F
Sbjct:  407 IARRVHNATLILSEGLKRAGH-QLQHDLFFDTLKIQCGCSVKEVLGRAAQRQINFRLFEDGTLGISLDETVNEKDLDDLLWIFGCESSAELVAESMGEECRGIPGSVFKRTSPFLTHQVFNSYHSETNIVRYMKKLENKDISLVHSMIPLGSCTMKLNSSSELAPITWKEFANIHPFVPLDQAQGYQQLF 595          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_DECAR (Glycine dehydrogenase [decarboxylating] OS=Dechloromonas aromatica (strain RCB) GN=gcvP PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.648e-40
Identity = 91/190 (47.89%), Postives = 116/190 (61.05%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            TIA R+H L    A GLK+  +V +    F+DTV     A A ++ + A     NLR V +  +  SFDETTT +DV  LF + A       T  +     ++A+P  L R    L HPVFN +HTEHE+LRY+  LQ+K+L+L HSMI LG CTMK+N T+EM+PVTWP F  IHPFAP DQA GY EM
Sbjct:  359 TIAGRIHRLTAILAEGLKR-ASVNLLTKQFYDTVHFDLGARAESVYNDALAAGYNLRRVSAGVLGISFDETTTRDDVATLFKLIAQTTLDVATIDAQVAAADSALPDSLIRSDAVLQHPVFNTHHTEHEMLRYLKSLQNKDLALDHSMISLGSCTMKLNATSEMIPVTWPEFGGIHPFAPRDQAVGYLEM 547          
The following BLAST results are available for this feature:
BLAST of EY753598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_CHRVO4.484e-4047.87Glycine dehydrogenase [decarboxylating] OS=Chromob... [more]
GCSP_BURTA4.484e-4047.98Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_XANCP5.856e-4046.28Glycine dehydrogenase [decarboxylating] OS=Xanthom... [more]
GCSP_XANC85.856e-4046.28Glycine dehydrogenase [decarboxylating] OS=Xanthom... [more]
GCSP_VIBPA5.856e-4045.45Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_BURS35.856e-4047.47Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_VIBVY7.648e-4044.92Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_SHEB97.648e-4044.79Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_HUMAN7.648e-4043.68Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_DECAR7.648e-4047.89Glycine dehydrogenase [decarboxylating] OS=Dechlor... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-F12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753598 ID=EY753598; Name=EY753598; organism=Citrus sinensis; type=EST; length=761bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGGATCTGTACAATGAAAATGAATGNCACAACTGAAATGATGCCAGTGAC
ATGGCCTANCTTTGCTAACATACACCCTTTTGCCCCTGCTGACCAGGCTC
AGGGTTATCANGAAATGTTTAACATCTGGGTGAGTGGCTGTGAACCATAC
TGGCTTTGACTCTTCTCTTTGCACAAATGCNTGTGCANCTGGTGATATGC
CTGGCTCATGGTATCCGCGCTTATATAGGGCAAGAGAGACATCACCGAAT
GTGGCATTTACCCGGGTCACCCATGGAAAAATCTGCACTGCTGCCTGTGG
GAAAGAAAAAT
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