EY753598

Overview
NameEY753598
Unique NameEY753598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SHEFN (Glycine dehydrogenase [decarboxylating] OS=Shewanella frigidimarina (strain NCIMB 400) GN=gcvP PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.225e-39
Identity = 87/194 (44.85%), Postives = 115/194 (59.28%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMFN 573
            TIA R++ LA   A GL   G + +    +FDT+ VK AD  AI + A   ++NLR+        S DETT   D+  LF V  G   G  V    A +      +IP  L R+   LTHP FN+Y +E E++RYI  L++K+L+L HSMI LG CTMK+N   EM+PV+WP FAN+HPF P DQAQGY ++ N
Sbjct:  359 TIASRINRLADILAAGLTAKG-LTLANTTWFDTISVKGADVAAINARAIAAQVNLRIDADGVFGISLDETTIRTDIADLFDVILGAGHGLDVATFDADIVANGSQSIPDALVRQDAVLTHPTFNRYQSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFCPLDQAQGYTQLIN 551          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB8 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS185) GN=gcvP PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.225e-39
Identity = 85/192 (44.27%), Postives = 118/192 (61.46%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            TIA R++  A   A GL+  G V +    +FDT+ +K  D  A+ + A   EMNLR     TV  S DETT   D++ LF V  G   G  V    A +  +   +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LG CTMK+N   EM+PV+WP FAN+HPF+P DQA+GY ++
Sbjct:  359 TIASRINRFADILAAGLQAKG-VSLVNSTWFDTISIKGLDVAAVNARALAAEMNLRFDADGTVGVSLDETTLRTDIEALFDVILGADHGLDVAALDAQIVSQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFSPLDQAKGYTQL 549          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB5 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gcvP PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.225e-39
Identity = 85/192 (44.27%), Postives = 118/192 (61.46%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            TIA R++  A   A GL+  G V +    +FDT+ +K  D  A+ + A   EMNLR     TV  S DETT   D++ LF V  G   G  V    A +  +   +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LG CTMK+N   EM+PV+WP FAN+HPF+P DQA+GY ++
Sbjct:  359 TIASRINRFADILAAGLQAKG-VSLVNSTWFDTISIKGLDVAAVNARALAAEMNLRFDADGTVGVSLDETTLRTDIEALFDVILGAGHGLDVAALDAQIVSQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFANMHPFSPLDQAKGYTQL 549          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SALHS (Glycine dehydrogenase [decarboxylating] OS=Salmonella heidelberg (strain SL476) GN=gcvP PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.796e-39
Identity = 85/193 (44.04%), Postives = 124/193 (64.25%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMFN 573
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  GG S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M +
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGG-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMIS 550          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SALG2 (Glycine dehydrogenase [decarboxylating] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=gcvP PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.796e-39
Identity = 85/193 (44.04%), Postives = 124/193 (64.25%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMFN 573
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  GG S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M +
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGG-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMIS 550          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SALEP (Glycine dehydrogenase [decarboxylating] OS=Salmonella enteritidis PT4 (strain P125109) GN=gcvP PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.796e-39
Identity = 85/193 (44.04%), Postives = 124/193 (64.25%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMFN 573
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  GG S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M +
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGG-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMIS 550          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SALDC (Glycine dehydrogenase [decarboxylating] OS=Salmonella dublin (strain CT_02021853) GN=gcvP PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.796e-39
Identity = 85/193 (44.04%), Postives = 124/193 (64.25%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMFN 573
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  GG S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M +
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGG-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMIS 550          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SHEPA (Glycine dehydrogenase [decarboxylating] OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.958e-39
Identity = 84/191 (43.98%), Postives = 115/191 (60.21%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA+R+H L    A  L   G VE+    +FDT+ +K  D  A+ + A    +NLR+     +  S  ETTT  DV +LF V  G   G+      A++     ++IPS L R+   LTHP FN+Y +E E++RYI  L++K+L+L HSMI LG CTMK+N  TEM P+TWP F N+HPF P DQAQGY ++
Sbjct:  360 IAERIHRLTDIVAAALTAKG-VELVNNTWFDTLSIKGLDVTAVQARALATGLNLRIDSDGVIGVSLSETTTRSDVAELFDVLLGEGHGQDAAALDAAIIANGSSSIPSELVRKDAILTHPTFNRYQSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMAPITWPEFGNMHPFCPQDQAQGYAQL 549          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SHEON (Glycine dehydrogenase [decarboxylating] OS=Shewanella oneidensis GN=gcvP PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.958e-39
Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            TIA R++  A   A GL+  G V +    +FDT+ +K  D  A+ + A   EMNLR      V  S DETT   D+D LF V  G   G  V    A +  +   +IP+ L RE   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LG CTMK+N   EM+PV+WP FAN+HPF P DQA+GY ++
Sbjct:  359 TIASRINRFADILAAGLQAKG-VSLVNNTWFDTISIKGLDVAAVNARALAAEMNLRFDADGIVGVSLDETTIRTDIDALFEVILGAGHGLDVAALDAQIVAQGSQSIPASLVREDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPLDQAKGYTQL 549          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SALTI (Glycine dehydrogenase [decarboxylating] OS=Salmonella typhi GN=gcvP PE=3 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 4.958e-39
Identity = 85/193 (44.04%), Postives = 124/193 (64.25%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMFN 573
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  G  S      +L ++V     +I  G+ R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M +
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGD-SHGLNIETLDKDVALDSRSIQQGMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYHQMIS 550          
The following BLAST results are available for this feature:
BLAST of EY753598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_SHEFN2.225e-3944.85Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHEB82.225e-3944.27Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHEB52.225e-3944.27Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SALHS3.796e-3944.04Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALG23.796e-3944.04Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALEP3.796e-3944.04Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALDC3.796e-3944.04Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SHEPA4.958e-3943.98Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHEON4.958e-3944.79Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SALTI4.958e-3944.04Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-F12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753598 ID=EY753598; Name=EY753598; organism=Citrus sinensis; type=EST; length=761bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGGATCTGTACAATGAAAATGAATGNCACAACTGAAATGATGCCAGTGAC
ATGGCCTANCTTTGCTAACATACACCCTTTTGCCCCTGCTGACCAGGCTC
AGGGTTATCANGAAATGTTTAACATCTGGGTGAGTGGCTGTGAACCATAC
TGGCTTTGACTCTTCTCTTTGCACAAATGCNTGTGCANCTGGTGATATGC
CTGGCTCATGGTATCCGCGCTTATATAGGGCAAGAGAGACATCACCGAAT
GTGGCATTTACCCGGGTCACCCATGGAAAAATCTGCACTGCTGCCTGTGG
GAAAGAAAAAT
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