EY753598

Overview
NameEY753598
Unique NameEY753598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_PHOPR (Glycine dehydrogenase [decarboxylating] OS=Photobacterium profundum GN=gcvP PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.481e-38
Identity = 89/194 (45.88%), Postives = 121/194 (62.37%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV----KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGK--SVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            I +RVH L    A GL+  G +E+    FFDT+ +    K  D +  A AA    +NLR  D   +  S DETT + DV++L  +F G K  +  FTA   A+E   AIP    R S YLTHPVFN++H+E +++RY+  L++K+ SL H MIPLG CTMK+N   EM+P+TWP F ++HPFAPADQ +GY E+
Sbjct:  360 IGRRVHHLTAILAAGLRNSG-IELASDTFFDTITLNTGKKTDDFYKKALAA---GINLRKFDVQ-LGISLDETTKVSDVEELLAIFTGNKLKASMFTADIAADEF-AAIPESCRRTSKYLTHPVFNEHHSETQMMRYMKKLENKDYSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGSLHPFAPADQTKGYQEL 547          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_ECOSM (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=gcvP PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.481e-38
Identity = 83/191 (43.46%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKEGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQM 548          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEF5 (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP2 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.481e-38
Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAH-AIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGY 558
            IAQRVH L    A+GL++ G   V    FFDT+ ++   +  AI  +A   ++NLR++    +  S DET     V +LF VF G       +   AE +E+ IP  L R + YLTHPVF+ +H+E E+LRY+  L++K+L+L  SMIPLG CTMK+N ++EM+P+TWP FAN+HPFAP +QA GY
Sbjct:  357 IAQRVHRLTCILAVGLERHGIARVNR-HFFDTLTLEVGGSQTAIIESARAQQINLRILGRGRLGLSLDETCDESTVTRLFDVFLGADHGLDVSNLDAEALESGIPDPLLRRTRYLTHPVFSAHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNASSEMIPITWPEFANLHPFAPREQAAGY 541          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_ECOL6 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O6 GN=gcvP PE=3 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 7.159e-38
Identity = 82/191 (42.93%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +   +I + + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHD-SRSIQAAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQM 548          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_ECO81 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O81 (strain ED1a) GN=gcvP PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.159e-38
Identity = 82/191 (42.93%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +   +I + + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHD-SRSIQAAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQM 548          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_ECO27 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=gcvP PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.159e-38
Identity = 82/191 (42.93%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +   +I + + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHD-SRSIQAAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQM 548          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_BURPP (Glycine dehydrogenase [decarboxylating] OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gcvP PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.159e-38
Identity = 92/198 (46.46%), Postives = 116/198 (58.59%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGK------SVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMFN 573
            TIA RV+ +A   A G K+LG   +    FFDT+     A   A+  AA    +NLR V +  V  S DETTT  D+  L  VFA          V    A LA     ++P+ L R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLG CTMK+N T+EM+PVTWP F  IHPFAPA+Q  GY EM +
Sbjct:  372 TIALRVNRIAALLAEGAKQLGYT-LANETFFDTLTFDTGARTQALLDAATAKRINLRRVSATQVGLSIDETTTRHDLADLLAVFAQAAFTNDVPQVDALDAKLAASNTASVPAALERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGQIHPFAPAEQTVGYREMID 568          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.350e-38
Identity = 85/191 (44.50%), Postives = 112/191 (58.64%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEMF 570
            IA+R+H      A GL+  G  ++    FFDT+++   +     +   A    +NLR  D  +   S DETTT +DV  L  +F         A     E    +P+ L R+SPYL HPVF  YH+EH LLRYIH LQ+K+LSL  SMIPLG CTMK+N T EM+P++WP F  +HPFAP +QAQGY  +F
Sbjct:  366 IAERIHQRTVRLAAGLEAAG-YQLYYSEFFDTLRIGLGNLPVPVLKERAAAARINLRYFDDGSAGISLDETTTEKDVADLLALFG--------ARPAEVEGGDRLPAALKRQSPYLQHPVFQDYHSEHALLRYIHRLQAKDLSLTTSMIPLGSCTMKLNATAEMLPISWPEFNQLHPFAPQEQAQGYQALF 547          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SHISS (Glycine dehydrogenase [decarboxylating] OS=Shigella sonnei (strain Ss046) GN=gcvP PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.350e-38
Identity = 83/191 (43.46%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQM 548          
BLAST of EY753598 vs. ExPASy Swiss-Prot
Match: GCSP_SHIDS (Glycine dehydrogenase [decarboxylating] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gcvP PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.350e-38
Identity = 83/191 (43.46%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGICTMKMNXTTEMMPVTWPXFANIHPFAPADQAQGYXEM 567
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLG CTMK+N   EM+P+TWP FA +HPF P +QA+GY +M
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQM 548          
The following BLAST results are available for this feature:
BLAST of EY753598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_PHOPR5.481e-3845.88Glycine dehydrogenase [decarboxylating] OS=Photoba... [more]
GCSP_ECOSM5.481e-3843.46Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP2_PSEF55.481e-3845.70Glycine dehydrogenase [decarboxylating] 2 OS=Pseud... [more]
GCSP_ECOL67.159e-3842.93Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECO817.159e-3842.93Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECO277.159e-3842.93Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_BURPP7.159e-3846.46Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_THEEB9.350e-3844.50Glycine dehydrogenase [decarboxylating] OS=Thermos... [more]
GCSP_SHISS9.350e-3843.46Glycine dehydrogenase [decarboxylating] OS=Shigell... [more]
GCSP_SHIDS9.350e-3843.46Glycine dehydrogenase [decarboxylating] OS=Shigell... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-F12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753598 ID=EY753598; Name=EY753598; organism=Citrus sinensis; type=EST; length=761bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGGATCTGTACAATGAAAATGAATGNCACAACTGAAATGATGCCAGTGAC
ATGGCCTANCTTTGCTAACATACACCCTTTTGCCCCTGCTGACCAGGCTC
AGGGTTATCANGAAATGTTTAACATCTGGGTGAGTGGCTGTGAACCATAC
TGGCTTTGACTCTTCTCTTTGCACAAATGCNTGTGCANCTGGTGATATGC
CTGGCTCATGGTATCCGCGCTTATATAGGGCAAGAGAGACATCACCGAAT
GTGGCATTTACCCGGGTCACCCATGGAAAAATCTGCACTGCTGCCTGTGG
GAAAGAAAAAT
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