EY753595
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.835e-75 Identity = 122/130 (93.85%), Postives = 127/130 (97.69%), Query Frame = 3 Query: 216 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRNAGGPLGEMTDPLY 605 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR AGGPLGE+TDP+Y Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIY 130 HSP 2 Score: 41.9726 bits (97), Expect = 1.835e-75 Identity = 26/63 (41.27%), Postives = 31/63 (49.21%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKNWKXGYVLHVWVLSSGHWHRQGNRKKTGRTLG*PWKNNAGAHPPN 819 GLADDPEAFAELKVKE+KN + +G + L P NNA A+ N Sbjct: 139 GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 201
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.403e-69 Identity = 112/147 (76.19%), Postives = 123/147 (83.67%), Query Frame = 3 Query: 168 SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRNAGGPLGEMTDPLY 605 S+G WYGPDR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAGAQIFSEGGLDYLG+P+LIHAQ+I+A A QVVLMG +EGYR GGP GE DPLY Sbjct: 34 SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLY 180 HSP 2 Score: 38.5058 bits (88), Expect = 2.403e-69 Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKN 687 GLADDP+ FAELKVKEIKN Sbjct: 189 GLADDPDTFAELKVKEIKN 207 HSP 3 Score: 35.4242 bits (80), Expect = 2.403e-69 Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 728 QAIGTGKGTVKKLAEHLADPG 790 QAI TGKG ++ LA+HLADPG Sbjct: 221 QAIVTGKGPIQNLADHLADPG 241
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.172e-68 Identity = 114/158 (72.15%), Postives = 131/158 (82.91%), Query Frame = 3 Query: 144 RKTGSKSV---SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRNAGGPLGEMTDPLY 605 +KT +K+ SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A QV+LMG +EGYR GGP GE DPLY Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLY 177 HSP 2 Score: 38.5058 bits (88), Expect = 1.172e-68 Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKN 687 GLADDP+ FAELKVKEIKN Sbjct: 186 GLADDPDTFAELKVKEIKN 204 HSP 3 Score: 29.261 bits (64), Expect = 1.172e-68 Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2 Query: 728 QAIGTGKGTVKKLAEHLADP 787 QAI TGKG V+ L +HLA+P Sbjct: 218 QAIVTGKGPVQNLDDHLANP 237
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 9.759e-68 Identity = 126/176 (71.59%), Postives = 136/176 (77.27%), Query Frame = 3 Query: 78 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRNAGGPLGEMTDPLY 605 + K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIW +V+LMGAVEGYR A GPLGE+TDPLY Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTC--DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLY 193 HSP 2 Score: 35.8094 bits (81), Expect = 9.759e-68 Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKN 687 GLA+D EAFAELKVKE+KN Sbjct: 201 GLAEDTEAFAELKVKELKN 219
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 9.970e-64 Identity = 117/189 (61.90%), Postives = 139/189 (73.54%), Query Frame = 3 Query: 42 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR-NAGGPLGEMTD 596 MA++ MA +S + V K L+ G S + + ++ G+ WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+R N +GE D Sbjct: 1 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGND 189 HSP 2 Score: 36.965 bits (84), Expect = 9.970e-64 Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKN 687 GLADDP FAELKVKEIKN Sbjct: 201 GLADDPVTFAELKVKEIKN 219 HSP 3 Score: 27.7202 bits (60), Expect = 9.970e-64 Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 728 QAIGTGKGTVKKLAEHLADP 787 QAI TGKG ++ L +HL DP Sbjct: 233 QAIVTGKGPLENLFDHLDDP 252
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.691e-63 Identity = 113/186 (60.75%), Postives = 137/186 (73.66%), Query Frame = 3 Query: 45 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRNAGGP-LGEMTD 596 +++T+ ++ F+G+ N P + ++ G ++ S WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAG+QIFS+GGLDYLGNP+L+HAQSILA+ QVVLMG VEG+R G P +GE D Sbjct: 9 SSTTVVKATPFLGQTKNANPLRDVVAMGS--------ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND 186 HSP 2 Score: 37.3502 bits (85), Expect = 1.691e-63 Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKN 687 GLADDP FAELKVKEIKN Sbjct: 198 GLADDPTTFAELKVKEIKN 216 HSP 3 Score: 26.1794 bits (56), Expect = 1.691e-63 Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 728 QAIGTGKGTVKKLAEHLADP 787 QAI TGKG ++ L +HL +P Sbjct: 230 QAIVTGKGPLENLLDHLDNP 249
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 3.819e-59 Identity = 98/140 (70.00%), Postives = 115/140 (82.14%), Query Frame = 3 Query: 183 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRNAGGPLGEMTD 596 +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YLGN SLIHAQSI+A A QVVLMG E YR GG G + D Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDD 172 HSP 2 Score: 38.5058 bits (88), Expect = 3.819e-59 Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKN 687 GLADDP+ FAELKVKEIKN Sbjct: 186 GLADDPDTFAELKVKEIKN 204 HSP 3 Score: 31.9574 bits (71), Expect = 3.819e-59 Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 2 Query: 728 QAIGTGKGTVKKLAEHLADP 787 QAI TGKG V+ L +HLADP Sbjct: 218 QAIVTGKGPVQNLTDHLADP 237
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.037e-55 Identity = 101/155 (65.16%), Postives = 115/155 (74.19%), Query Frame = 3 Query: 147 KTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRNAGGPLGEMTDPLY 605 K SKS SS + +YGPD + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA +G+KFG+A +WFKAGA IF +GGL+YLGNPSLIHAQ+I+A A QVVLMG VEGYR GGP GE DPLY Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLY 198 HSP 2 Score: 38.5058 bits (88), Expect = 1.037e-55 Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKN 687 GLADDP+ FAELKVKEIKN Sbjct: 207 GLADDPDTFAELKVKEIKN 225 HSP 3 Score: 30.0314 bits (66), Expect = 1.037e-55 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 728 QAIGTGKGTVKKLAEHLADPGK 793 QAI TGKG ++ L +HLA+P + Sbjct: 239 QAIVTGKGPIENLTDHLANPAE 260
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.754e-40 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 3 Query: 384 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRNAGGPLGEMTDPLY 605 ELL +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR GGPLGE DPLY Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLY 74 HSP 2 Score: 37.7354 bits (86), Expect = 4.754e-40 Identity = 18/19 (94.74%), Postives = 18/19 (94.74%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKN 687 GLADDPEA AELKVKEIKN Sbjct: 83 GLADDPEAKAELKVKEIKN 101 HSP 3 Score: 30.8018 bits (68), Expect = 4.754e-40 Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2 Query: 728 QAIGTGKGTVKKLAEHLADP 787 QAI TGKG ++ L +HLADP Sbjct: 115 QAIVTGKGPIENLYDHLADP 134
BLAST of EY753595 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.287e-27 Identity = 69/148 (46.62%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 156 SKSVSSGSP----WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRNAGG 575 SK+VS S WYGPDR +L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I +LA+ A +VVL+G E YR G Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLGGAEYYRITNG 193 HSP 2 Score: 32.3426 bits (72), Expect = 2.287e-27 Identity = 20/56 (35.71%), Postives = 27/56 (48.21%), Query Frame = 1 Query: 631 GLADDPEAFAELKVKEIKNWKXGYVLHVWVLSSGHWHRQGNRKKTGRTLG*PWKNN 798 GLA DPE A LKVKEIKN + + + +G + + L P+ NN Sbjct: 210 GLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265 The following BLAST results are available for this feature:
BLAST of EY753595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753595 ID=EY753595; Name=EY753595; organism=Citrus sinensis; type=EST; length=821bpback to top |