EY753580

Overview
NameEY753580
Unique NameEY753580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2850 contig Csv1_Contig2850:47..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_NICPL (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia GN=EIF-5A1 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 5.120e-78
Identity = 140/159 (88.05%), Postives = 147/159 (92.45%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIGPK 544
            MSDEEHHFESKADAGASKT+PQQAGTIRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+NLL+ IKDGF  GKDLV+S   AMGEEQI  +KD+GPK
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 1.141e-77
Identity = 140/160 (87.50%), Postives = 151/160 (94.38%), Query Frame = 2
Query:   68 MSD-EEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIGPK 544
            MSD EEHHFESKADAGASKT+PQQAGT+RKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD+PHV RT+YQLIDISEDGFVSLLT +GNTKDDLRLPTDE L++QIK+GFESGKDLVV+ Q AMGEEQI ALKD+GPK
Sbjct:    1 MSDSEEHHFESKADAGASKTYPQQAGTVRKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFESGKDLVVTVQSAMGEEQICALKDVGPK 160          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.490e-77
Identity = 139/159 (87.42%), Postives = 147/159 (92.45%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIGPK 544
            MSDEEHHFESKADAGASKT+PQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+ LL+Q+KDGF  GKDLV+S   AMGEEQI  +KDIGPK
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.946e-77
Identity = 139/159 (87.42%), Postives = 146/159 (91.82%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIGPK 544
            MSDEEHHFESKADAGASKT+PQQAGTIRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+ LL+Q+KDGF  GKDLV+S   AMGEEQI  +KDIGPK
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.655e-77
Identity = 141/159 (88.68%), Postives = 146/159 (91.82%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIGPK 544
            MSDEEH FESKADAGASKT+PQQAGTIRK G+IVIK R CKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD+ LL+QIKDGF  GKDLVVS   AMGEEQI ALKDIGPK
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.106e-75
Identity = 137/159 (86.16%), Postives = 145/159 (91.19%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIGPK 544
            MSDEEHHFES +DAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCDVPHV RTDYQLIDISEDG+VSLLT+NG+TKDDL+LP D+ LL QIK GF+ GKDLVVS   AMGEEQINALKDIGPK
Sbjct:    1 MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.298e-75
Identity = 139/160 (86.88%), Postives = 146/160 (91.25%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDI-VPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIGPK 544
            MSDEEH FESKADAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLE++ VPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD++LL+QIKDGF  GKDLVVS   AMGEEQI ALKDIG K
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEEVYVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGK 160          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A_DIACA (Eukaryotic translation initiation factor 5A OS=Dianthus caryophyllus PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.461e-72
Identity = 126/156 (80.77%), Postives = 145/156 (92.95%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDI 535
            MSD++HHFES ADAGASKT+PQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV R DYQL+DI+EDGFVSLLT++G+TKDDL+LP DE L+ Q+K+GFE+GKDL++S  CAMGEEQI A+KD+
Sbjct:    1 MSDDDHHFESSADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRVDYQLLDITEDGFVSLLTDSGDTKDDLKLPADEALVKQMKEGFEAGKDLILSVMCAMGEEQICAVKDV 156          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A3_ARATH (Eukaryotic translation initiation factor 5A-3 OS=Arabidopsis thaliana GN=At1g69410 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.461e-72
Identity = 131/159 (82.39%), Postives = 145/159 (91.19%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIGPK 544
            MSD+EHHFES +DAGASKT+PQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCDVPHV R DYQLIDISEDGFVSLLT+NG+TKDDL+LPTDE LL+Q+K+GFE GKD+VVS   AMGEEQ+ ALK++GPK
Sbjct:    1 MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A2_ARATH (Eukaryotic translation initiation factor 5A-2 OS=Arabidopsis thaliana GN=At1g26630 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.970e-65
Identity = 117/157 (74.52%), Postives = 138/157 (87.90%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIG 538
            MSD+EHHFE+ +++GASKT+PQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCDVPHV R DYQLIDI+EDGFVSLLT++G TKDDL+LPTD+ L +Q++ GF+ GKD+VVS   +MGEEQI A+K++G
Sbjct:    1 MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156          
The following BLAST results are available for this feature:
BLAST of EY753580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
IF5A1_NICPL5.120e-7888.05Eukaryotic translation initiation factor 5A-1 OS=N... [more]
IF5A_MAIZE1.141e-7787.50Eukaryotic translation initiation factor 5A OS=Zea... [more]
IF5A5_SOLTU1.490e-7787.42Eukaryotic translation initiation factor 5A-5 OS=S... [more]
IF5A1_SOLLC1.946e-7787.42Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A_SENVE9.655e-7788.68Eukaryotic translation initiation factor 5A OS=Sen... [more]
IF5A1_ARATH3.106e-7586.16Eukaryotic translation initiation factor 5A-1 OS=A... [more]
IF5A1_MEDSA5.298e-7586.88Eukaryotic translation initiation factor 5A-1 OS=M... [more]
IF5A_DIACA2.461e-7280.77Eukaryotic translation initiation factor 5A OS=Dia... [more]
IF5A3_ARATH2.461e-7282.39Eukaryotic translation initiation factor 5A-3 OS=A... [more]
IF5A2_ARATH4.970e-6574.52Eukaryotic translation initiation factor 5A-2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-E06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753580 ID=EY753580; Name=EY753580; organism=Citrus sinensis; type=EST; length=868bp
GTATAGTTTGATTCTACCAAAATTTGGTTGTCGAAGCTCTAATTGTGAAT
CGCAGGAACCAGACGATATGTCGGACGAAGAGCACCACTTTGAGTCGAAG
GCCGACGCCGGCGCCTCCAAGACATTTCCTCAGCAGGCCGGAACCATCCG
CAAAAACGGTTATATCGTCATCAAAGGTCGTCCTTGCAAGGTTGTTGAGG
TTTCAACTTCCAAGACTGGAAAGCACGGTCATGCTAAGTGTCACTTTGTA
GGAATTGACATCTTCAATGGCAAGAAGCTTGAGGATATTGTTCCCTCTTC
CCACAACTGTGATGTTCCTCATGTCACTCGCACTGACTACCAGCTGATTG
ATATCTCTGAGGATGGATTTGTTAGCCTGCTGACTGAGAATGGCAATACC
AAGGATGACCTGAGACTTCCAACTGATGAAAATCTGCTTTCACAGATCAA
GGATGGATTTGAGAGTGGGAAAGATCTGGTTGTCTCANTTCAGTGTGCTA
TGGGAGAGGAGCAGATCAATGCCCTGAAGGACATTGGCCCCAAGTAAAAG
ACTTTTGCTTGATCGAGAATGCANATTGCTGAAAGCTGTGGGAAGGTGGA
TAGTANTGTANCTTTACTGGTGTCCGGTTTCAAGATGAATGCCATCATTT
CATATAAAATGACTCTTACCATATAATTAATGGTTTTCTATCGACAGTAT
TTTTATTCTGTTTGATTGCTNGAAAAGTGAACAATGGTTTGTCTCGGTGT
GCAAAAGNTGTATCCCCCCACGTGACTGTATTACACTTGAACCCTCTTTG
GGTTGGTTCAACCATGCAATTACAGCTTCGTGGTAAAAAAAAAAAAAAAA
AAAAAAAAAGGGCGGGCG
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