EY753580

Overview
NameEY753580
Unique NameEY753580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2850 contig Csv1_Contig2850:47..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A2_CHICK (Eukaryotic translation initiation factor 5A-2 OS=Gallus gallus GN=EIF5A2 PE=1 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 1.191e-42
Identity = 84/142 (59.15%), Postives = 110/142 (77.46%), Query Frame = 2
Query:  104 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALK 529
            DAGAS T+P Q   +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIFNGKK EDI PS+HN DVP++ R DYQLI I +DG++SLLTE+G  ++DL+LP + +L  +I+  F + +D+ +S   AM EE   A+K
Sbjct:   11 DAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPNIKRNDYQLIGI-QDGYLSLLTESGEVREDLKLP-EGDLGKEIEGKFNANEDVQISVISAMNEECAVAIK 150          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A_DROME (Eukaryotic translation initiation factor 5A OS=Drosophila melanogaster GN=eIF-5A PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.654e-42
Identity = 84/154 (54.55%), Postives = 117/154 (75.97%), Query Frame = 2
Query:   68 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALK 529
            M++ +  FE+  D+GAS T+P Q   +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIF+ KK EDI PS+HN DVP+V R D QLI IS+D F++L+TE+G+ ++DL++P  E L  Q++  F+SGKDL+ +   A GEE + A+K
Sbjct:    1 MAELDDQFET-TDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGE-LGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_RABIT (Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus GN=EIF5A PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 7.722e-42
Identity = 81/142 (57.04%), Postives = 111/142 (78.17%), Query Frame = 2
Query:  104 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALK 529
            DAGAS TFP Q   +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G  ++DLRLP + +L  +I+  ++SG++++++   AM EE   A+K
Sbjct:   11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDSGEEILITVLSAMTEEAAVAIK 150          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_RAT (Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus GN=Eif5a PE=1 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 2.934e-41
Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = 2
Query:  104 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALK 529
            DAGAS TFP Q   +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G  ++DLRLP + +L  +I+  ++ G++++++   AM EE   A+K
Sbjct:   11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_MOUSE (Eukaryotic translation initiation factor 5A-1 OS=Mus musculus GN=Eif5a PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.934e-41
Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = 2
Query:  104 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALK 529
            DAGAS TFP Q   +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G  ++DLRLP + +L  +I+  ++ G++++++   AM EE   A+K
Sbjct:   11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_HUMAN (Eukaryotic translation initiation factor 5A-1 OS=Homo sapiens GN=EIF5A PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.934e-41
Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = 2
Query:  104 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALK 529
            DAGAS TFP Q   +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G  ++DLRLP + +L  +I+  ++ G++++++   AM EE   A+K
Sbjct:   11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_BOVIN (Eukaryotic translation initiation factor 5A-1 OS=Bos taurus GN=EIF5A PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 2.934e-41
Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = 2
Query:  104 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALK 529
            DAGAS TFP Q   +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G  ++DLRLP + +L  +I+  ++ G++++++   AM EE   A+K
Sbjct:   11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A_NEUCR (Eukaryotic translation initiation factor 5A OS=Neurospora crassa GN=tif-51 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.902e-40
Identity = 87/160 (54.37%), Postives = 108/160 (67.50%), Query Frame = 2
Query:   65 DMSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALKDIGPK 544
            D +  EH F+S  DAGAS T+P Q   +RK G++VIK RPCK+V++STSKTGKHGHAK H V IDIF GKKLED+ PS+HN DVP+V RTDYQ   I ED F+ L+  NG  K D+++P  E L  +I+   E GKD  V  Q AMGEE    +K+   K
Sbjct:    6 DDAQHEHTFDS-VDAGASATYPMQCSALRKGGHVVIKNRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLCPSTHNMDVPNVKRTDYQFSYIDED-FLVLIDSNGEEKRDVKMPEGE-LAKRIEKLEEEGKDFFVGVQTAMGEEAAIDVKEASNK 162          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5AL_HUMAN (Eukaryotic translation initiation factor 5A-1-like OS=Homo sapiens GN=EIF5AL1 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.103e-39
Identity = 78/142 (54.93%), Postives = 107/142 (75.35%), Query Frame = 2
Query:  104 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSXQCAMGEEQINALK 529
            DAGAS TFP Q   +RKNG++V+KG PCK+VE+S SKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DG++SLL ++G   +DLRLP + +L  +I+  ++ G++++++   AM EE   A+K
Sbjct:   11 DAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVPEDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150          
BLAST of EY753580 vs. ExPASy Swiss-Prot
Match: IF5A1_CHICK (Eukaryotic translation initiation factor 5A-1 OS=Gallus gallus GN=EIF5A1 PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 3.587e-39
Identity = 76/126 (60.32%), Postives = 100/126 (79.37%), Query Frame = 2
Query:  104 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLV 481
            DAGAS TFP Q   +RKNG++V+KGRPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN DVP++ R D+QLI I +DGF+SLL ++G  ++DLRLP  E L  +I+  ++ G++++
Sbjct:   11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRCDFQLIGI-QDGFLSLLQDSGEVREDLRLPEGE-LGREIEQKYDCGEEII 134          
The following BLAST results are available for this feature:
BLAST of EY753580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
IF5A2_CHICK1.191e-4259.15Eukaryotic translation initiation factor 5A-2 OS=G... [more]
IF5A_DROME2.654e-4254.55Eukaryotic translation initiation factor 5A OS=Dro... [more]
IF5A1_RABIT7.722e-4257.04Eukaryotic translation initiation factor 5A-1 OS=O... [more]
IF5A1_RAT2.934e-4156.34Eukaryotic translation initiation factor 5A-1 OS=R... [more]
IF5A1_MOUSE2.934e-4156.34Eukaryotic translation initiation factor 5A-1 OS=M... [more]
IF5A1_HUMAN2.934e-4156.34Eukaryotic translation initiation factor 5A-1 OS=H... [more]
IF5A1_BOVIN2.934e-4156.34Eukaryotic translation initiation factor 5A-1 OS=B... [more]
IF5A_NEUCR1.902e-4054.38Eukaryotic translation initiation factor 5A OS=Neu... [more]
IF5AL_HUMAN2.103e-3954.93Eukaryotic translation initiation factor 5A-1-like... [more]
IF5A1_CHICK3.587e-3960.32Eukaryotic translation initiation factor 5A-1 OS=G... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-E06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753580 ID=EY753580; Name=EY753580; organism=Citrus sinensis; type=EST; length=868bp
GTATAGTTTGATTCTACCAAAATTTGGTTGTCGAAGCTCTAATTGTGAAT
CGCAGGAACCAGACGATATGTCGGACGAAGAGCACCACTTTGAGTCGAAG
GCCGACGCCGGCGCCTCCAAGACATTTCCTCAGCAGGCCGGAACCATCCG
CAAAAACGGTTATATCGTCATCAAAGGTCGTCCTTGCAAGGTTGTTGAGG
TTTCAACTTCCAAGACTGGAAAGCACGGTCATGCTAAGTGTCACTTTGTA
GGAATTGACATCTTCAATGGCAAGAAGCTTGAGGATATTGTTCCCTCTTC
CCACAACTGTGATGTTCCTCATGTCACTCGCACTGACTACCAGCTGATTG
ATATCTCTGAGGATGGATTTGTTAGCCTGCTGACTGAGAATGGCAATACC
AAGGATGACCTGAGACTTCCAACTGATGAAAATCTGCTTTCACAGATCAA
GGATGGATTTGAGAGTGGGAAAGATCTGGTTGTCTCANTTCAGTGTGCTA
TGGGAGAGGAGCAGATCAATGCCCTGAAGGACATTGGCCCCAAGTAAAAG
ACTTTTGCTTGATCGAGAATGCANATTGCTGAAAGCTGTGGGAAGGTGGA
TAGTANTGTANCTTTACTGGTGTCCGGTTTCAAGATGAATGCCATCATTT
CATATAAAATGACTCTTACCATATAATTAATGGTTTTCTATCGACAGTAT
TTTTATTCTGTTTGATTGCTNGAAAAGTGAACAATGGTTTGTCTCGGTGT
GCAAAAGNTGTATCCCCCCACGTGACTGTATTACACTTGAACCCTCTTTG
GGTTGGTTCAACCATGCAATTACAGCTTCGTGGTAAAAAAAAAAAAAAAA
AAAAAAAAAGGGCGGGCG
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