EY753578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: RH53_ORYSJ (DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0143700 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12 Identity = 44/115 (38.26%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 424 VSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGG 768 V+R IS + E+L ++GI LFPIQ D + G D+ GRARTG GKTL F +PI++ + + ++K G GR P ++L PTR L + + L S C++GG Sbjct: 86 VARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRI----LRHNEKNGSGRNPLAIILAPTRELARQ----VEKEFKESAPLDSLCVYGG 192
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: RH3_ARATH (DEAD-box ATP-dependent RNA helicase 3 OS=Arabidopsis thaliana GN=RH3 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12 Identity = 46/130 (35.38%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 421 AVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 A+S+ + L E L+ +GI LFPIQ L G D+ RA+TG GKTL F +PI++ LT + GR P LVL PTR L + + L++ C++GG SY + L +G+ Sbjct: 103 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKE---IKESAPYLSTVCVYGGVSYTIQQSALTRGV 229
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: RH3_ORYSJ (DEAD-box ATP-dependent RNA helicase 3 OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12 Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 421 AVSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGGPSYYGSEFKLKKGL 810 A++R + L L+ +GI LFPIQ LDG DL RA+TG GKTL F +P+++ L S + GR P VLVL PTR L + + L++ C++GG SY + L +G+ Sbjct: 105 AIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRR--GRIPRVLVLAPTRELAKQVEKE---IKESAPKLSTVCVYGGVSYNVQQNALSRGV 229
BLAST of EY753578 vs. ExPASy Swiss-Prot
Match: RH9_ORYSJ (DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp. japonica GN=Os12g0611200 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11 Identity = 39/115 (33.91%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 424 VSRFKISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLXGRARTGQGKTLXFVLPILESLTNGPTKASKKTGYGRAPGVLVLLPTRGLGQTGS*GLWCLMAGQGDLTSCCLFGG 768 V++ IS + +L S+GI LFPIQ + + G D+ GRA+TG GKTL F +PIL+++ + ++K G+ P +VL PTR L + + + ++ + C++GG Sbjct: 100 VAKLGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAI----IRHNEKNSPGKFPLAIVLAPTRELAKQ----VEREFSDSSNVETICVYGG 206 The following BLAST results are available for this feature:
BLAST of EY753578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753578 ID=EY753578; Name=EY753578; organism=Citrus sinensis; type=EST; length=895bpback to top |