EY753574

Overview
NameEY753574
Unique NameEY753574
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6440 contig Csv1_Contig6440:1..503. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.799e-26
Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDT---KMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D    FIR+ LS +AWD +++ + AFT K+++GK ERE +WA AQRTLHGL AP+     +F++ + + EL+++               LNTLKGHVESVV+LKGLDIDTI Q+YTV
Sbjct:  835 DIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA6_ARATH (ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.200e-25
Identity = 58/114 (50.88%), Postives = 75/114 (65.79%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D +    RY LS KAW+ +IE R AFT KKD+G+ ERE +WA AQRTLHGL  P++ MF +   +TEL+++               ++TLKGHVESVV+LKGLDID + Q YTV
Sbjct:  837 DILKFITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES-MFEDTATYTELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA9_ARATH (ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 5.486e-25
Identity = 58/115 (50.43%), Postives = 75/115 (65.22%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTK-MFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D +   IRY+LS +AWD VIE + AFT KKD+GK ERE +WA AQRTLHGL    T  MF++ + + EL+++                +TLKGHVESVV+ KGLDI+ IQQ YT+
Sbjct:  840 DILKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA1_ARATH (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 1.951e-22
Identity = 56/115 (48.70%), Postives = 68/115 (59.13%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLH-APDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D +   IRY LS KAW  + + R AFT KKD+G  ERE +WA AQRTLHGL    D  +F E   + EL+++               L+TLKGHVESV +LKGLDIDT    YTV
Sbjct:  835 DILKFAIRYILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA2_ARATH (ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.652e-21
Identity = 57/115 (49.57%), Postives = 70/115 (60.87%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPD-TKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D     IRY LS KAW  + E + AFT KKD+GKEERE +WA AQRTLHGL   +   +F E   + EL+++               L+TLKGHVESVV+LKGLDI+T    YTV
Sbjct:  835 DVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVNIFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 948          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA3_ARATH (ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.826e-20
Identity = 54/115 (46.96%), Postives = 71/115 (61.74%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDT-KMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 370
            D +   IRY L+  AW  +I+ R AFT K+++G EERE +WAHAQRTLHGL   +T  +  E   + EL+++               L+TLKGHVESVV+LKGLDI+T    YTV
Sbjct:  836 DIMKFAIRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGYRELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAGH-YTV 949          
BLAST of EY753574 vs. ExPASy Swiss-Prot
Match: PMA7_ARATH (ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=AHA7 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.468e-17
Identity = 50/115 (43.48%), Postives = 63/115 (54.78%), Query Frame = 2
Query:   29 DFIMXFIRYALSAKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDI-DTIQQSYTV 370
            D I   +RYALS K+WD ++E R A T KK+FG+EER   WA  +RT HGL      ++ E N  TELN M               L TLKG VES  +LKG D+ D    +YT+
Sbjct:  848 DPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQKPVY-ERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961          
The following BLAST results are available for this feature:
BLAST of EY753574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PMA1_WHEAT3.799e-2649.57Plasma membrane ATPase OS=Triticum aestivum GN=ha1... [more]
PMA6_ARATH4.200e-2550.88ATPase 6, plasma membrane-type OS=Arabidopsis thal... [more]
PMA9_ARATH5.486e-2550.43ATPase 9, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ARATH1.951e-2248.70ATPase 1, plasma membrane-type OS=Arabidopsis thal... [more]
PMA2_ARATH1.652e-2149.57ATPase 2, plasma membrane-type OS=Arabidopsis thal... [more]
PMA3_ARATH1.826e-2046.96ATPase 3, plasma membrane-type OS=Arabidopsis thal... [more]
PMA7_ARATH2.468e-1743.48ATPase 7, plasma membrane-type OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753574 ID=EY753574; Name=EY753574; organism=Citrus sinensis; type=EST; length=518bp
GGNATTCCAAACCCGACCCACGCGTCCGGATTTTATTATGNTCTTCATCA
GATATGCTTTGAGCGCGAAGGCGTGGGATCTTGTCATTGAGCAAAGGATT
GCCTTCACAAGGAAGAAGGATTTTGGTAAAGAAGAACGTGAGCTTAAATG
GGCACATGCACAGAGAACCCTCCACGGGTTACACGCACCTGATACAAAGA
TGTTCAGTGAACACAACAAGTTCACAGAACTTAACCAGATGGCTGAAGAG
GCAAAACGAAGAGCTGAGATTGCAAGATTGAGAGAACTGAATACTCTGAA
AGGGCATGTTGAATCAGTGGTTAGGCTGAAAGGTCTGGATATCGACACGA
TTCAGCAATCTTATACCGTCTGATAGAGATCATACATGAACATGGAAACA
TATGTTGTAGTTGAGAACTGATATTAAAGCCACATAAATTATCATCCTAA
TGTATAAGCCTTTAGTCCACCTGTATTTATTATATCATCATCCTTTGCAG
TTAAAAAAAAAAAAAAAA
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