EY753572

Overview
NameEY753572
Unique NameEY753572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1842 contig Csv1_Contig1842:30..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEP1 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=msrB PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.905e-27
Identity = 60/129 (46.51%), Postives = 79/129 (61.24%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAIN---RSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            +KT +EWR++L PEQ+++ R KGTE   +G+YN    DG Y+C  CG AL+ + TKFD+GCGWP+FY  +  +     R       RTE+TCA C  HLGHVF       PT  R+C+NSV I   P D
Sbjct:    5 EKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLALFDAQTKFDAGCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDG--PPPTGLRYCINSVCIDLRPRD 131          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ACIAD (Peptide methionine sulfoxide reductase msrB OS=Acinetobacter sp. (strain ADP1) GN=msrB PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.795e-27
Identity = 61/123 (49.59%), Postives = 75/123 (60.98%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDGR---RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 403
            KTE EW+  LSPE++RI RQKGTEP  TG+Y      G Y C  CGT L+ S++K+DSGCGWP+FY+ +        D       RTEI C  C  HLGHVF  E    PT  R+CVNS S++
Sbjct:    6 KTEREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQSGTYVCRCCGTELFSSISKYDSGCGWPSFYKPINTTAIEEHDDFSHGMVRTEIVCHHCDAHLGHVF--EDGPQPTGLRYCVNSASLQ 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_SYNR3 (Peptide methionine sulfoxide reductase msrB OS=Synechococcus sp. (strain RCC307) GN=msrB PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.473e-27
Identity = 64/128 (50.00%), Postives = 78/128 (60.94%), Query Frame = 2
Query:   32 DSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            D  + +E +WR+ L+PEQFRI R+ GTE   TG Y     DG Y C  CG  L++S  KFDSG GWP+F+EG+ P AI    D      RTEI CA C  HLGHVF+     TPT  R+CVNS S+ F
Sbjct:    7 DPVEASENDWRSKLTPEQFRITREGGTERAFTGAYWNHKGDGMYRCICCGAELFRSDRKFDSGTGWPSFWEGVNPEAIRTIQDVSHGMVRTEIRCAKCDSHLGHVFQDS--PTPTGLRYCVNSASLDF 132          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEPW (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas putida (strain W619) GN=msrB PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.473e-27
Identity = 62/128 (48.44%), Postives = 76/128 (59.38%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            KT EEWRA+L PEQ+++ R KGTE   TG+YN     G Y+C  C   L+ S TKFDSGCGWP+FY  +  +     R       RTE+TCA C  HLGHVF       PT  R+C+NSV + F P D
Sbjct:    6 KTLEEWRAMLDPEQYQVCRLKGTERPFTGKYNSEKRAGTYHCICCDLPLFDSNTKFDSGCGWPSFYAPIEDSAMIETRDTSHGMIRTEVTCAQCDAHLGHVFPDG--PPPTGLRYCINSVCLDFKPRD 131          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSE14 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=msrB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.453e-27
Identity = 59/130 (45.38%), Postives = 77/130 (59.23%), Query Frame = 2
Query:   32 DSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            D  QKT EEW+ +L P Q+++ R KGTE   +G+YN+   +G Y+C  C   L+ S TKFDSGCGWP+FY  L G+     R       RTE+ CA C  HLGHVF       PT  R+C+NSV +  +P
Sbjct:    2 DKLQKTLEEWKEMLDPAQYQVCRLKGTERPFSGKYNETKTEGVYHCICCNEPLFDSTTKFDSGCGWPSFYAPLEGSAVVEVRDVSHGMIRTEVVCAKCDAHLGHVFPDG--PPPTGLRYCINSVCLDLVP 129          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_METMA (Peptide methionine sulfoxide reductase msrB OS=Methanosarcina mazei GN=msrB PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.453e-27
Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = 2
Query:   26 AADSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGE--YNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            A +  +K+EE+W+++L+PEQ+ +LRQKGTE   +G   YNK    G Y CA CG  L+ S TKF+SG GWP+FY+ +     R  + +    +R E+ C+ CG HLGHVF  E    PT +R+C+NSVS+ F
Sbjct:    2 AQNKIEKSEEDWKSVLTPEQYHVLRQKGTERPFSGNLYYNK--EKGIYTCAACGQELFSSDTKFESGTGWPSFYDVISSDRVRLHEDNSYFMKRIEVVCSRCGSHLGHVF--EDGPEPTGQRYCINSVSLGF 129          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSESM (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas syringae pv. tomato GN=msrB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.104e-26
Identity = 60/130 (46.15%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   32 DSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            D  QKT EEW+ +L P Q+ + R KGTE   +G+YN     G Y+C  C  AL+ S TKFDSGCGWP+FY  L G+     R       RTE+ CA C  HLGHVF       PT  R+C+NSV ++ +P
Sbjct:    2 DKLQKTLEEWKEMLDPAQYSVCRLKGTERPFSGKYNDTKTAGVYHCICCNEALFDSTTKFDSGCGWPSFYAPLEGSAVVEVRDVSHGMIRTEVVCARCDAHLGHVFPDG--PPPTGLRYCINSVCLELVP 129          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEPK (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas putida (strain KT2440) GN=msrB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.104e-26
Identity = 59/129 (45.74%), Postives = 78/129 (60.47%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAIN---RSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            +KT +EWR++L PEQ+++ R KGTE   +G+YN    DG Y+C  CG  L+ + TKFD+GCGWP+FY  +  +     R       RTE+TCA C  HLGHVF       PT  R+C+NSV I   P D
Sbjct:    5 EKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLPLFDAQTKFDAGCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDG--PPPTGLRYCINSVCIDLRPRD 131          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_METPP (Peptide methionine sulfoxide reductase msrB OS=Methylibium petroleiphilum (strain PM1) GN=msrB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.104e-26
Identity = 63/138 (45.65%), Postives = 81/138 (58.70%), Query Frame = 2
Query:   17 MTAAADSP---QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            M++  D P   QKTE EWRA L P QF + R   TE   TG+Y   + +G Y+C GC   L+ S TKFD+GCGWP++++ L G  I+R  D      R E+ C  CG HLGHVF       PT ER+C+NS S+ F P
Sbjct:    1 MSSTDDKPRKVQKTEAEWRAQLDPMQFEVTRHGATERAFTGKYADHWQEGVYHCVGCNAPLFDSGTKFDAGCGWPSYFQPLRGEIIDRVVDRSHGMVRVEVRCQDCGAHLGHVFPDG--PEPTGERYCINSASLGFEP 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_METBF (Peptide methionine sulfoxide reductase msrB OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=msrB PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.104e-26
Identity = 61/132 (46.21%), Postives = 82/132 (62.12%), Query Frame = 2
Query:   26 AADSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGE--YNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            A  + +K+EEEW+ +L+PEQ+ +LRQKGTE   +G   YNK    G Y CA CG  L+ S TKF+SG GWP+FY+ +     R  +       R E+ C+ CG HLGHVF  E    PT +R+C+NSVS+ F
Sbjct:    2 AQKAVEKSEEEWKKVLTPEQYHVLRQKGTERPFSGNLYYNK--EKGVYTCAACGQELFSSDTKFESGTGWPSFYDVISSDRVRLKEDTSYFMNRIEVVCSRCGSHLGHVF--EDGPAPTGKRYCINSVSLNF 129          
The following BLAST results are available for this feature:
BLAST of EY753572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_PSEP12.905e-2746.51Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_ACIAD3.795e-2749.59Peptide methionine sulfoxide reductase msrB OS=Aci... [more]
MSRB_SYNR36.473e-2750.00Peptide methionine sulfoxide reductase msrB OS=Syn... [more]
MSRB_PSEPW6.473e-2748.44Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSE148.453e-2745.38Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_METMA8.453e-2745.45Peptide methionine sulfoxide reductase msrB OS=Met... [more]
MSRB_PSESM1.104e-2646.15Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEPK1.104e-2645.74Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_METPP1.104e-2645.65Peptide methionine sulfoxide reductase msrB OS=Met... [more]
MSRB_METBF1.104e-2646.21Peptide methionine sulfoxide reductase msrB OS=Met... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753572 ID=EY753572; Name=EY753572; organism=Citrus sinensis; type=EST; length=614bp
ATTGAAACCTATCCCCATGACTGCAGCAGCAGATTCCCCTCAGAAAACCG
AGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCAGTTTAGGATTCTACGC
CAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGTACAACAAGTTGTATGC
GGATGGGTTTTACAACTGTGCTGGCTGTGGAACTGCGCTTTACAAGTCTG
TTACCAAATTCGATTCTGGATGTGGGTGGCCAGCTTTCTATGAAGGTCTT
CCTGGAGCCATAAATCGCTCCCCTGATCCTGATGGAAGGAGAACCGAGAT
AACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACGTCTTCAAAGGGGAGG
GATTCAAAACGCCTACAGATGAACGCCACTGTGTCAATAGTGTTTCAATT
AAGTTTATTCCAGGTGATGCTCCTGCTTCATCATGAAGAATGTAAGACTG
TCATGGGGTTGTTGAATAAGATTTGACTGTTTGTCACTTCTGCCAATTGT
TTTTGGCTTTAATGTCCTAGACATGGTGTTGTTTGTATAATTATTACGCG
GCCAATATTAGCCTATGCCATAGTATAAACCACTTTGTTTGGTTTGCAAA
AAAAAAAAAAAAAA
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