EY753572

Overview
NameEY753572
Unique NameEY753572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ECO81 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O81 (strain ED1a) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.868e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PHPTGERYCVNSASLRFTDGE 130          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_VIBVU (Peptide methionine sulfoxide reductase msrB OS=Vibrio vulnificus GN=msrB PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.001e-19
Identity = 54/128 (42.19%), Postives = 73/128 (57.03%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSP-------DPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            K++++WR  LS +++ + R++GTEP  +G+       G Y C  C   L+ SV K+DSGCGWP+F       IN +            +R EI CA C  HLGHVF  +G KT T ER CVNSVS+ F
Sbjct:   26 KSDQQWREQLSEQEYHVCREQGTEPPFSGKLLHNKDSGEYACTCCHAPLFSSVNKYDSGCGWPSF----DAPINETAVLYLDDFSHGMKRVEIRCARCDSHLGHVFP-DGPKT-TGERFCVNSVSLIF 147          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_KLEP7 (Peptide methionine sulfoxide reductase msrB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.001e-19
Identity = 53/123 (43.09%), Postives = 66/123 (53.66%), Query Frame = 2
Query:   47 TEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            T EE +  LS  QF + +  GTEP  TG       +G Y+C  C   L+ S TK+DSGCGWP+FYE +     R    +    +R EI C  C  HLGHVF       PT ER+CVNS S+ F
Sbjct:    6 TPEELKNGLSEMQFYVTQHHGTEPPFTGRLLHNKKNGVYHCLVCDAPLFNSQTKYDSGCGWPSFYEPVSAEAIRYLTDNSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLSF 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_VIBVY (Peptide methionine sulfoxide reductase msrB OS=Vibrio vulnificus (strain YJ016) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 54/128 (42.19%), Postives = 73/128 (57.03%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSP-------DPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            K++++WR  LS +++ + R++GTEP  +G+       G Y C  C   L+ SV K+DSGCGWP+F       IN +            +R EI CA C  HLGHVF  +G KT T ER CVNSVS+ F
Sbjct:   26 KSDQQWREQLSEQEYHVCREQGTEPPFSGKLLHNKDSGEYACTCCYAPLFSSVNKYDSGCGWPSF----DAPINETAVLYLDDFSHGMKRVEIRCARCDSHLGHVFP-DGPKT-TGERFCVNSVSLIF 147          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURVG (Peptide methionine sulfoxide reductase msrB OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            QK + E R  L+P Q+ + +   TE   TGEY      G Y C  C T L++S  KF SGCGWP++++ L G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   13 QKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKIDRSHGMVRVEVRCNHCGAHLGHVFE-DGPRDQTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURM1 (Peptide methionine sulfoxide reductase msrB OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            +K + E R  L+P Q+ + +   TE   TGEY     DG Y C  C T L++S  KF SGCGWP++++ L G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   13 RKDDAELRRRLTPLQYEVTQHAATERAFTGEYTDKEDDGIYKCVVCDTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKIDYSHGMVRVEVRCNHCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURCM (Peptide methionine sulfoxide reductase msrB OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI--NRSPDPDGR-RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            QK + E R  L+P Q+ + +   TE   TGEY      G Y C  C T L++S  KF SGCGWP++++ L G +   +     G  R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   13 QKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKIDRTHGMVRVEVRCNHCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURCH (Peptide methionine sulfoxide reductase msrB OS=Burkholderia cenocepacia (strain HI2424) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            QK + E R  L+P Q+ + +   TE   TGEY      G Y C  C T L++S  KF SGCGWP++++ L G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   13 QKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKVDYSHGMVRVEVRCNNCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURCC (Peptide methionine sulfoxide reductase msrB OS=Burkholderia cenocepacia (strain MC0-3) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            QK + E R  L+P Q+ + +   TE   TGEY      G Y C  C T L++S  KF SGCGWP++++ L G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   13 QKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKVDYSHGMVRVEVRCNHCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURCA (Peptide methionine sulfoxide reductase msrB OS=Burkholderia cenocepacia (strain AU 1054) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            QK + E R  L+P Q+ + +   TE   TGEY      G Y C  C T L++S  KF SGCGWP++++ L G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   13 QKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKVDYSHGMVRVEVRCNNCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
The following BLAST results are available for this feature:
BLAST of EY753572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_ECO815.868e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_VIBVU1.001e-1942.19Peptide methionine sulfoxide reductase msrB OS=Vib... [more]
MSRB_KLEP71.001e-1943.09Peptide methionine sulfoxide reductase msrB OS=Kle... [more]
MSRB_VIBVY1.307e-1942.19Peptide methionine sulfoxide reductase msrB OS=Vib... [more]
MSRB_BURVG1.307e-1940.00Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_BURM11.307e-1940.00Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_BURCM1.307e-1939.20Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_BURCH1.307e-1940.00Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_BURCC1.307e-1940.00Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_BURCA1.307e-1940.00Peptide methionine sulfoxide reductase msrB OS=Bur... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753572 ID=EY753572; Name=EY753572; organism=Citrus sinensis; type=EST; length=614bp
ATTGAAACCTATCCCCATGACTGCAGCAGCAGATTCCCCTCAGAAAACCG
AGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCAGTTTAGGATTCTACGC
CAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGTACAACAAGTTGTATGC
GGATGGGTTTTACAACTGTGCTGGCTGTGGAACTGCGCTTTACAAGTCTG
TTACCAAATTCGATTCTGGATGTGGGTGGCCAGCTTTCTATGAAGGTCTT
CCTGGAGCCATAAATCGCTCCCCTGATCCTGATGGAAGGAGAACCGAGAT
AACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACGTCTTCAAAGGGGAGG
GATTCAAAACGCCTACAGATGAACGCCACTGTGTCAATAGTGTTTCAATT
AAGTTTATTCCAGGTGATGCTCCTGCTTCATCATGAAGAATGTAAGACTG
TCATGGGGTTGTTGAATAAGATTTGACTGTTTGTCACTTCTGCCAATTGT
TTTTGGCTTTAATGTCCTAGACATGGTGTTGTTTGTATAATTATTACGCG
GCCAATATTAGCCTATGCCATAGTATAAACCACTTTGTTTGGTTTGCAAA
AAAAAAAAAAAAAA
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