EY753572

Overview
NameEY753572
Unique NameEY753572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURA4 (Peptide methionine sulfoxide reductase msrB OS=Burkholderia ambifaria (strain MC40-6) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI--NRSPDPDGR-RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            QK + E R  L+P Q+ + +   TE   TGEY      G Y C  C T L++S  KF SGCGWP++++ L G +   +     G  R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   13 QKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKIDHMHGMVRVEVRCNHCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB2_HUMAN (Methionine-R-sulfoxide reductase B2, mitochondrial OS=Homo sapiens GN=MSRB2 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 56/132 (42.42%), Postives = 73/132 (55.30%), Query Frame = 2
Query:   50 EEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYE--GLPGA------INRSPDPD--GRRTEITCAACGGHLGHVF-KGEGFKTPTDERHCVNSVSIKFIP 412
            + EW+  L+PEQF + R+KGTEP  +G Y      G Y+C  C + L+ S  K+ SG GWP+F E  G  G+      I R  D      RTE+ C  C  HLGHVF  G G   P  +R C+NSV++KF P
Sbjct:   51 KSEWQKKLTPEQFYVTREKGTEPPFSGIYLNNKEAGMYHCVCCDSPLFSSEKKYCSGTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEVVCKQCEAHLGHVFPDGPG---PNGQRFCINSVALKFKP 179          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURCJ (Peptide methionine sulfoxide reductase msrB OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=msrB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.707e-19
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            QK + E R  L+P Q+ + +   TE   TGEY      G Y C  C T L++S  KF SGCGWP++++ L G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   13 QKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDAGIYKCVVCSTPLFESGAKFHSGCGWPSYFKPLNGEVIDEKIDYSHGMVRVEVRCNHCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURTA (Peptide methionine sulfoxide reductase msrB OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=msrB PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.912e-19
Identity = 48/124 (38.71%), Postives = 71/124 (57.26%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            K + E R  L+P Q+ + +   TE   TGEY      G Y+C  CGTAL++S  K+ SGCGWP++++ +    I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   14 KDDAELRRRLTPMQYEVTQHAATERPFTGEYTDTEDAGIYHCVVCGTALFESGAKYHSGCGWPSYFKPIDAEVIDEKMDYTHGMTRVEVRCNQCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ESCF3 (Peptide methionine sulfoxide reductase msrB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=msrB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.488e-19
Identity = 52/115 (45.22%), Postives = 63/115 (54.78%), Query Frame = 2
Query:   71 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDG--RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            LS  QF + ++ GTEP  TG       DG Y C  C T L+ S +K+DSGCGWP+FYE +   +I    D      R EI C  C  HLGHVF       PT ER+CVNS S+ F
Sbjct:   14 LSEMQFYVTQKHGTEPPYTGRLLHNKRDGVYRCLVCDTPLFNSQSKYDSGCGWPSFYEPVNENSIRYLTDLSHGMERIEIRCGHCDAHLGHVFPDG--PQPTGERYCVNSASLSF 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB2_MOUSE (Methionine-R-sulfoxide reductase B2, mitochondrial OS=Mus musculus GN=Msrb2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.473e-19
Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 2
Query:   47 TEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL---------PGAINRSPDPDG-RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            +E +W+  L+PEQF + R+KGTE   +G Y      G Y+C  C + L+ S  K+ SG GWP+F E            G + R     G  R E+ C  C  HLGHVF  +G K PT +R C+NSV++KF P
Sbjct:   43 SEADWQKKLTPEQFYVTREKGTEAPFSGMYLNNKETGMYHCVCCDSPLFSSEKKYCSGTGWPSFSEAYGSKGSDESHTGILRRLDTSLGCPRMEVVCKQCEAHLGHVFP-DGPK-PTGQRFCINSVALKFKP 172          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_KLEP3 (Peptide methionine sulfoxide reductase msrB OS=Klebsiella pneumoniae (strain 342) GN=msrB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.107e-18
Identity = 50/115 (43.48%), Postives = 62/115 (53.91%), Query Frame = 2
Query:   71 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            LS  QF + +  GTEP  TG       +G Y+C  C   L+ S TK+DSGCGWP+FYE +     R    +    +R EI C  C  HLGHVF       PT ER+CVNS S+ F
Sbjct:   14 LSEMQFYVTQHHGTEPPFTGRLLHNKKNGVYHCLVCDAPLFNSQTKYDSGCGWPSFYEPVSDEAIRYLTDNSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLSF 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB2_DANRE (Methionine-R-sulfoxide reductase B2, mitochondrial OS=Danio rerio GN=msrb2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.888e-18
Identity = 51/129 (39.53%), Postives = 68/129 (52.71%), Query Frame = 2
Query:   56 EWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEG--------LPGAINRSPDPD--GRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            +W+  LSPEQ+ + R+KGTE   +G Y      G Y+C  C + L+ S  K+D+G GWP+F E             I R PD       TE+ C  C  HLGHVF  E    PT +R C+NSV++ F P
Sbjct:   51 DWQRKLSPEQYVVTREKGTEVPFSGIYLNHNEVGMYHCVCCDSPLFSSEAKYDAGAGWPSFCEAHGTWEKDESHANIVRRPDNSLGSTGTEVICKHCDAHLGHVF--EDGPDPTGQRFCINSVALNFKP 177          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB2_RAT (Methionine-R-sulfoxide reductase B2, mitochondrial OS=Rattus norvegicus GN=Msrb2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.465e-18
Identity = 51/132 (38.64%), Postives = 70/132 (53.03%), Query Frame = 2
Query:   47 TEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFY---------EGLPGAINRSPDPDG-RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            ++ +W+  L+PEQF + R+KGTE   +G Y K    G Y+C  C + L+ S  K+ SG GWP+F          E   G + R     G  R E+ C  C  HLGHVF       PT +R C+NSV++KF P
Sbjct:   42 SKADWQKKLTPEQFYVTREKGTEAPFSGMYLKNKETGMYHCVCCDSPLFSSEKKYCSGTGWPSFSEAHGTKGSDESHTGILRRLDTSLGCPRMEVVCKQCEAHLGHVFPDG--PDPTGQRFCINSVALKFKP 171          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ALHEH (Peptide methionine sulfoxide reductase msrB OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.173e-18
Identity = 48/123 (39.02%), Postives = 66/123 (53.66%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDGR---RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSI 400
            +K++ EWRA L+ EQ+ + RQ GTE   +G Y      G Y+C  C   L+ S  K+DSG GWP+F+  +     R  +       R E+ CA C  HLGHVF       PT  R+C+NSV +
Sbjct:    5 EKSDAEWRAQLTDEQYAVCRQGGTEQPFSGAYYHCKEPGTYHCVCCDAPLFSSRAKYDSGSGWPSFWAPISDDHLRILEDRSLGMVREEVRCARCDAHLGHVFPDG--PMPTGLRYCINSVCL 125          
The following BLAST results are available for this feature:
BLAST of EY753572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_BURA41.307e-1939.20Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB2_HUMAN1.307e-1942.42Methionine-R-sulfoxide reductase B2, mitochondrial... [more]
MSRB_BURCJ1.707e-1940.00Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_BURTA2.912e-1938.71Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_ESCF36.488e-1945.22Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB2_MOUSE8.473e-1940.15Methionine-R-sulfoxide reductase B2, mitochondrial... [more]
MSRB_KLEP31.107e-1843.48Peptide methionine sulfoxide reductase msrB OS=Kle... [more]
MSRB2_DANRE1.888e-1839.53Methionine-R-sulfoxide reductase B2, mitochondrial... [more]
MSRB2_RAT2.465e-1838.64Methionine-R-sulfoxide reductase B2, mitochondrial... [more]
MSRB_ALHEH7.173e-1839.02Peptide methionine sulfoxide reductase msrB OS=Alk... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753572 ID=EY753572; Name=EY753572; organism=Citrus sinensis; type=EST; length=614bp
ATTGAAACCTATCCCCATGACTGCAGCAGCAGATTCCCCTCAGAAAACCG
AGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCAGTTTAGGATTCTACGC
CAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGTACAACAAGTTGTATGC
GGATGGGTTTTACAACTGTGCTGGCTGTGGAACTGCGCTTTACAAGTCTG
TTACCAAATTCGATTCTGGATGTGGGTGGCCAGCTTTCTATGAAGGTCTT
CCTGGAGCCATAAATCGCTCCCCTGATCCTGATGGAAGGAGAACCGAGAT
AACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACGTCTTCAAAGGGGAGG
GATTCAAAACGCCTACAGATGAACGCCACTGTGTCAATAGTGTTTCAATT
AAGTTTATTCCAGGTGATGCTCCTGCTTCATCATGAAGAATGTAAGACTG
TCATGGGGTTGTTGAATAAGATTTGACTGTTTGTCACTTCTGCCAATTGT
TTTTGGCTTTAATGTCCTAGACATGGTGTTGTTTGTATAATTATTACGCG
GCCAATATTAGCCTATGCCATAGTATAAACCACTTTGTTTGGTTTGCAAA
AAAAAAAAAAAAAA
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