EY753572

Overview
NameEY753572
Unique NameEY753572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1842 contig Csv1_Contig1842:30..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEPG (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas putida (strain GB-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.883e-26
Identity = 59/129 (45.74%), Postives = 77/129 (59.69%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAIN---RSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            +KT +EWR++L PEQ+++ R KGTE   +G+YN    DG Y+C  C   L+ + TKFDSGCGWP+FY  +  +     R       RTE+TCA C  HLGHVF       PT  R+C+NSV I   P D
Sbjct:    5 EKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCNLPLFDAQTKFDSGCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDG--PAPTGLRYCINSVCIDLRPRD 131          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_CHRSD (Peptide methionine sulfoxide reductase msrB OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=msrB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.883e-26
Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 2
Query:   29 ADSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGA-INRSPDPDG--RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            ++  QK+E EW+  L+PEQ+R+ R+KGTE   TG+Y      G Y+C  CG  L+++  KFD+GCGWP+F   L  A I    D     RR E+TC  C  HLGHVF  +G +  T  R+C+NSVS+ F PG+
Sbjct:    2 SEKVQKSEHEWQQQLTPEQYRVTREKGTERPFTGDYQVSDEQGIYHCVCCGAPLFENEHKFDAGCGWPSFDRPLADASIEEHLDTSHGMRRIEVTCRRCDSHLGHVFP-DGPQDTTGLRYCINSVSLDFHPGE 133          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEF5 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=msrB PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.460e-26
Identity = 58/127 (45.67%), Postives = 75/127 (59.06%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAIN---RSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            +KT EEWR++L PEQ+ + R KGTE   +G+YN    DG Y+C  C   L+ S  KFDSGCGWP+FYE +  +     R       RTE+ CA C  HLGHVF       PT  R+C+NSV +  +P
Sbjct:    5 EKTLEEWRSMLDPEQYNVCRLKGTERPFSGKYNGTKTDGVYHCICCNEPLFDSKAKFDSGCGWPSFYEPIADSAMVEIRDMSHGMIRTEVVCAKCDAHLGHVFPDG--PPPTGLRYCINSVCLDLVP 129          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEE4 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas entomophila (strain L48) GN=msrB PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.460e-26
Identity = 61/128 (47.66%), Postives = 75/128 (58.59%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAIN---RSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            KT EEWRA+L P Q+++ R KGTE   +G+YN    DG Y+C  C   L+ S  KFDSGCGWP+FYE +  A     R       RTE+TCA C  HLGHVF       PT  R+C+NSV +   P D
Sbjct:    6 KTLEEWRAMLDPAQYQVCRLKGTERPFSGKYNSERRDGVYHCICCDLPLFDSKAKFDSGCGWPSFYEPIEEAAMIEIRDTSHGMIRTEVTCAQCDAHLGHVFPDG--PPPTGLRYCINSVCLDLKPRD 131          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_THEEB (Peptide methionine sulfoxide reductase msrB OS=Thermosynechococcus elongatus (strain BP-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.195e-26
Identity = 61/132 (46.21%), Postives = 81/132 (61.36%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGDAPAS 430
            KT+ EW+A L+PEQ+ + R+KGTE   TG Y      G Y+C  CGT L++S TK+DSG GWP+F++ L P  I    D      RTE+ CA C  HLGHVF  E    PT  R+C+NS ++ F+P  A +S
Sbjct:    6 KTDAEWQAQLTPEQYYVTRKKGTERAFTGCYWNNKKPGLYSCVCCGTPLFRSETKYDSGTGWPSFWQPLDPNNIRMERDLSHGMVRTEVLCAVCDAHLGHVF--EDGPPPTGLRYCINSAALAFVPESAASS 135          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BRAJA (Peptide methionine sulfoxide reductase msrB OS=Bradyrhizobium japonicum GN=msrB PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.346e-26
Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 2
Query:   32 DSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYE-GLPGAINRSPDPDGR--RTEITCAACGGHLGHVF-KGEGFKTPTDERHCVNSVSIKFIP 412
            D   K+EE+WR  LSP Q+ +LR+K TE   +GEY   +  G Y CAGCG  L++S  KFDSGCGWP+F +  +   ++   D      RTE+ CA C GHLGHVF  G G   PT  R+C+NS ++K  P
Sbjct:   11 DKVIKSEEQWRRELSPIQYAVLREKATERPFSGEYEHDHRAGTYVCAGCGNVLFESDAKFDSGCGWPSFTQPAVESHVDEERDVSHGMIRTEVLCAKCSGHLGHVFPDGPG---PTGLRYCINSAALKLEP 138          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEPF (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas fluorescens (strain Pf0-1) GN=msrB PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.221e-25
Identity = 59/127 (46.46%), Postives = 74/127 (58.27%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            +KT EEWRA+L PEQF + R   TE   +G+YN    DG Y+C  C   L+ S TKFDSGCGWP+FY  +   A+    D      RTE+ CA C  HLGHVF       PT  R+C+NSV +  +P
Sbjct:    5 EKTLEEWRAMLDPEQFNVCRLSATERPFSGKYNATKTDGVYHCICCNEPLFDSKTKFDSGCGWPSFYAPIGDNAMTEIRDTSHGMIRTEVKCAKCDAHLGHVFPDG--PPPTGLRYCINSVCLDLVP 129          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_AGRT5 (Peptide methionine sulfoxide reductase msrB OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=msrB PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.594e-25
Identity = 60/126 (47.62%), Postives = 76/126 (60.32%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            K++ +WR  L+PEQ+ ILR+ GTE   TG Y      G Y CA C   L+ S TKFD+GCGWP+++E + PGA+    D      RTEI CA CGGHLGHVF       PT  R+C+N  S+ F P
Sbjct:   11 KSDADWREQLTPEQYHILREHGTERPFTGPYWNSTEKGLYRCAACDEPLFLSDTKFDAGCGWPSYFEPVKPGAVTEHRDSTHGMVRTEIRCANCGGHLGHVFPDG--PPPTGLRYCINGHSMVFEP 134          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_DECAR (Peptide methionine sulfoxide reductase msrB OS=Dechloromonas aromatica (strain RCB) GN=msrB PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.082e-25
Identity = 59/124 (47.58%), Postives = 76/124 (61.29%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFY-EGLPGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 403
            +KT+ EWRA L   ++R+ RQKGTE   TG+Y   + DG Y C  CG  L++S TKFDSGCGWP+F+       I+   D      RTE+TC  CG HLGHVF  +    PT  R+C+NS S+K
Sbjct:    5 EKTDAEWRAQLDENEYRVTRQKGTERAFTGKYWDTHDDGTYRCICCGAPLFRSETKFDSGCGWPSFHTPNDEKLIDEHVDQSFGMIRTEVTCHDCGAHLGHVF--DDGPAPTGLRYCINSASLK 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ACIBY (Peptide methionine sulfoxide reductase msrB OS=Acinetobacter baumannii (strain AYE) GN=msrB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 403
            KT+ EW+  LSPE++RI RQKGTEP  TG+Y      G Y C  CG  L+ S  K+DSGCGWP+F+  L G++   +        RTEI C  C  HLGHVF  E    PT  R+CVNS S++
Sbjct:    6 KTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKYDSGCGWPSFFRPLNGSVIDEHEDLTHGMVRTEIVCHDCEAHLGHVF--EDGPQPTGLRYCVNSASLQ 126          
The following BLAST results are available for this feature:
BLAST of EY753572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_PSEPG1.883e-2645.74Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_CHRSD1.883e-2645.11Peptide methionine sulfoxide reductase msrB OS=Chr... [more]
MSRB_PSEF52.460e-2645.67Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEE42.460e-2647.66Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_THEEB4.195e-2646.21Peptide methionine sulfoxide reductase msrB OS=The... [more]
MSRB_BRAJA9.346e-2646.56Peptide methionine sulfoxide reductase msrB OS=Bra... [more]
MSRB_PSEPF1.221e-2546.46Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_AGRT51.594e-2547.62Peptide methionine sulfoxide reductase msrB OS=Agr... [more]
MSRB_DECAR2.082e-2547.58Peptide methionine sulfoxide reductase msrB OS=Dec... [more]
MSRB_ACIBY2.719e-2547.97Peptide methionine sulfoxide reductase msrB OS=Aci... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753572 ID=EY753572; Name=EY753572; organism=Citrus sinensis; type=EST; length=614bp
ATTGAAACCTATCCCCATGACTGCAGCAGCAGATTCCCCTCAGAAAACCG
AGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCAGTTTAGGATTCTACGC
CAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGTACAACAAGTTGTATGC
GGATGGGTTTTACAACTGTGCTGGCTGTGGAACTGCGCTTTACAAGTCTG
TTACCAAATTCGATTCTGGATGTGGGTGGCCAGCTTTCTATGAAGGTCTT
CCTGGAGCCATAAATCGCTCCCCTGATCCTGATGGAAGGAGAACCGAGAT
AACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACGTCTTCAAAGGGGAGG
GATTCAAAACGCCTACAGATGAACGCCACTGTGTCAATAGTGTTTCAATT
AAGTTTATTCCAGGTGATGCTCCTGCTTCATCATGAAGAATGTAAGACTG
TCATGGGGTTGTTGAATAAGATTTGACTGTTTGTCACTTCTGCCAATTGT
TTTTGGCTTTAATGTCCTAGACATGGTGTTGTTTGTATAATTATTACGCG
GCCAATATTAGCCTATGCCATAGTATAAACCACTTTGTTTGGTTTGCAAA
AAAAAAAAAAAAAA
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