EY753572

Overview
NameEY753572
Unique NameEY753572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1842 contig Csv1_Contig1842:30..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ACIBT (Peptide methionine sulfoxide reductase msrB OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=msrB PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 403
            KT+ EW+  LSPE++RI RQKGTEP  TG+Y      G Y C  CG  L+ S  K+DSGCGWP+F+  L G++   +        RTEI C  C  HLGHVF  E    PT  R+CVNS S++
Sbjct:    6 KTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKYDSGCGWPSFFRPLNGSVIDEHEDLTHGMVRTEIVCHDCEAHLGHVF--EDGPQPTGLRYCVNSASLQ 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ACIBS (Peptide methionine sulfoxide reductase msrB OS=Acinetobacter baumannii (strain SDF) GN=msrB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 403
            KT+ EW+  LSPE++RI RQKGTEP  TG+Y      G Y C  CG  L+ S  K+DSGCGWP+F+  L G++   +        RTEI C  C  HLGHVF  E    PT  R+CVNS S++
Sbjct:    6 KTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKYDSGCGWPSFFRPLNGSVIDEHEDLTHGMVRTEIVCHDCEAHLGHVF--EDGPQPTGLRYCVNSASLQ 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ACIBC (Peptide methionine sulfoxide reductase msrB OS=Acinetobacter baumannii (strain ACICU) GN=msrB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 403
            KT+ EW+  LSPE++RI RQKGTEP  TG+Y      G Y C  CG  L+ S  K+DSGCGWP+F+  L G++   +        RTEI C  C  HLGHVF  E    PT  R+CVNS S++
Sbjct:    6 KTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKYDSGCGWPSFFRPLNGSVIDEHEDLTHGMVRTEIVCHDCEAHLGHVF--EDGPQPTGLRYCVNSASLQ 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ACIB5 (Peptide methionine sulfoxide reductase msrB OS=Acinetobacter baumannii (strain AB0057) GN=msrB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 403
            KT+ EW+  LSPE++RI RQKGTEP  TG+Y      G Y C  CG  L+ S  K+DSGCGWP+F+  L G++   +        RTEI C  C  HLGHVF  E    PT  R+CVNS S++
Sbjct:    6 KTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKYDSGCGWPSFFRPLNGSVIDEHEDLTHGMVRTEIVCHDCEAHLGHVF--EDGPQPTGLRYCVNSASLQ 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ACIB3 (Peptide methionine sulfoxide reductase msrB OS=Acinetobacter baumannii (strain AB307-0294) GN=msrB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 403
            KT+ EW+  LSPE++RI RQKGTEP  TG+Y      G Y C  CG  L+ S  K+DSGCGWP+F+  L G++   +        RTEI C  C  HLGHVF  E    PT  R+CVNS S++
Sbjct:    6 KTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKYDSGCGWPSFFRPLNGSVIDEHEDLTHGMVRTEIVCHDCEAHLGHVF--EDGPQPTGLRYCVNSASLQ 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_TERTT (Peptide methionine sulfoxide reductase msrB OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=msrB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.912e-25
Identity = 62/129 (48.06%), Postives = 78/129 (60.47%), Query Frame = 2
Query:   29 ADSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPD--GRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            +D   K ++ WR+ L+ E+FRI R+KGTE   +G+Y      G Y C  C T L+KS+ KFD+GCGWP+F+E L  G I    D      RTEI C ACG HLGHVF       PT  R+CVNS SI+F
Sbjct:    2 SDHNLKDDDYWRSKLTDEEFRICREKGTEMPFSGKYVDTTEAGTYLCRCCNTPLFKSLAKFDAGCGWPSFFEPLEKGVITEEMDTSLGMVRTEIMCEACGCHLGHVFTDG--PQPTGLRYCVNSASIQF 128          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB1_RHIME (Peptide methionine sulfoxide reductase msrB 1 OS=Rhizobium meliloti GN=msrB1 PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.007e-24
Identity = 59/124 (47.58%), Postives = 74/124 (59.68%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            KT EEWRA L+PEQ+R+ R+ GTE   TG +      G Y C  CG AL++S TKFDSGCGWP+++  + P AI    D      RTEI CA C  HLGHVF       PT  R+C+N  ++ F
Sbjct:   11 KTNEEWRAALTPEQYRVTREHGTERPFTGPFLDNKRHGTYKCVCCGRALFRSDTKFDSGCGWPSYFAPVDPDAIAEYVDRSHLMVRTEIRCADCDAHLGHVFPDG--PPPTGLRYCLNGTAMTF 132          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_RALSO (Peptide methionine sulfoxide reductase msrB OS=Ralstonia solanacearum GN=msrB PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.927e-24
Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI--NRSPDPDGR-RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            +KT+ EWR  LS  ++R+ R+  TE   TG Y   +A G Y+C  CGT L++S TKFD+GCGWP+++  + G +   ++    G  R E+ C  CG HLGHVF  E    PT  R+C+NS ++KF
Sbjct:    4 EKTDAEWRDQLSDIEYRVTREAATERPFTGRYWDHWARGIYHCVCCGTPLFESSTKFDAGCGWPSYFAPINGEVIAEKTDHSHGMVRIEVQCKQCGAHLGHVF--EDGPAPTGLRYCINSAALKF 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_HAHCH (Peptide methionine sulfoxide reductase msrB OS=Hahella chejuensis (strain KCTC 2396) GN=msrB PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.927e-24
Identity = 59/135 (43.70%), Postives = 77/135 (57.04%), Query Frame = 2
Query:   32 DSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGDAPA 427
            D  +K+++EWR  L+ EQ+R+ R KGTE   TGEY      G Y C  CG  L+ S  K+DSGCGWP+F+  +    I    D      RTEI C+ C  HLGHVF  +    PT +R+CVNS S++F   D  A
Sbjct:    2 DKVKKSDQEWRQQLTDEQYRVTRGKGTERPFTGEYYDTKEAGVYVCVCCGEPLFTSENKYDSGCGWPSFWAPMDKEKITEEIDMSHMMVRTEILCSKCDAHLGHVF--DDGPQPTGQRYCVNSASLRFHSADGDA 134          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_VARPS (Peptide methionine sulfoxide reductase msrB OS=Variovorax paradoxus (strain S110) GN=msrB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.143e-23
Identity = 59/130 (45.38%), Postives = 76/130 (58.46%), Query Frame = 2
Query:   41 QKTEEEWRAILS-----PEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAF-YEGLPGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            +KT+ EW+A+L+     P  F + R   TE   TG+Y   + DG Y+C  CG  L++S TKFD+GCGWP+F  E +PGAI    D      RTE  CA CG HLGHVF      T T  R+C+NS S+ F
Sbjct:    6 EKTDAEWKALLAEKGAEPAAFEVTRHAATERPFTGKYEAHWDDGTYHCICCGAKLFESSTKFDAGCGWPSFSQEAVPGAIRNIVDRSHGMVRTENVCANCGAHLGHVFPDG--PTETGLRYCMNSASLDF 133          
The following BLAST results are available for this feature:
BLAST of EY753572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_ACIBT2.719e-2547.97Peptide methionine sulfoxide reductase msrB OS=Aci... [more]
MSRB_ACIBS2.719e-2547.97Peptide methionine sulfoxide reductase msrB OS=Aci... [more]
MSRB_ACIBC2.719e-2547.97Peptide methionine sulfoxide reductase msrB OS=Aci... [more]
MSRB_ACIB52.719e-2547.97Peptide methionine sulfoxide reductase msrB OS=Aci... [more]
MSRB_ACIB32.719e-2547.97Peptide methionine sulfoxide reductase msrB OS=Aci... [more]
MSRB_TERTT7.912e-2548.06Peptide methionine sulfoxide reductase msrB OS=Ter... [more]
MSRB1_RHIME3.007e-2447.58Peptide methionine sulfoxide reductase msrB 1 OS=R... [more]
MSRB_RALSO3.927e-2443.20Peptide methionine sulfoxide reductase msrB OS=Ral... [more]
MSRB_HAHCH3.927e-2443.70Peptide methionine sulfoxide reductase msrB OS=Hah... [more]
MSRB_VARPS1.143e-2345.38Peptide methionine sulfoxide reductase msrB OS=Var... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753572 ID=EY753572; Name=EY753572; organism=Citrus sinensis; type=EST; length=614bp
ATTGAAACCTATCCCCATGACTGCAGCAGCAGATTCCCCTCAGAAAACCG
AGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCAGTTTAGGATTCTACGC
CAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGTACAACAAGTTGTATGC
GGATGGGTTTTACAACTGTGCTGGCTGTGGAACTGCGCTTTACAAGTCTG
TTACCAAATTCGATTCTGGATGTGGGTGGCCAGCTTTCTATGAAGGTCTT
CCTGGAGCCATAAATCGCTCCCCTGATCCTGATGGAAGGAGAACCGAGAT
AACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACGTCTTCAAAGGGGAGG
GATTCAAAACGCCTACAGATGAACGCCACTGTGTCAATAGTGTTTCAATT
AAGTTTATTCCAGGTGATGCTCCTGCTTCATCATGAAGAATGTAAGACTG
TCATGGGGTTGTTGAATAAGATTTGACTGTTTGTCACTTCTGCCAATTGT
TTTTGGCTTTAATGTCCTAGACATGGTGTTGTTTGTATAATTATTACGCG
GCCAATATTAGCCTATGCCATAGTATAAACCACTTTGTTTGGTTTGCAAA
AAAAAAAAAAAAAA
back to top