EY753572

Overview
NameEY753572
Unique NameEY753572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1842 contig Csv1_Contig1842:30..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEA7 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa (strain PA7) GN=msrB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.814e-22
Identity = 53/126 (42.06%), Postives = 70/126 (55.56%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 412
            K  + WR  L+ EQF I R  GTE   +GEY+     G Y+C  CGTAL+ S  K+DSG GWP++++ + G   R  D       R E+ C  C  HLGHVF       PT  R+C+NS S+K +P
Sbjct:    6 KPLDSWREELTEEQFHICRLGGTERAFSGEYHATKTPGVYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDGEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDG--PRPTGLRYCINSASLKLVP 129          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_AZOVD (Peptide methionine sulfoxide reductase msrB OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=msrB PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.675e-22
Identity = 53/132 (40.15%), Postives = 74/132 (56.06%), Query Frame = 2
Query:   32 DSPQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            D  +K+ + WR +LS E+FRI R  GTE   +GEY      G Y+CA C   L+ S  K+D+GCGWP++++ +  +   S D       R E+ CA C  HLGHVF       PT  R+C+NS S++  P D
Sbjct:    2 DKLEKSLDVWRELLSDERFRICRLGGTERAFSGEYYATSVPGVYHCACCDAPLFDSDAKYDAGCGWPSYFQPVAASALTSRDDYSHGMHRIEVLCARCDAHLGHVFPDG--PPPTGLRYCINSASLRLKPRD 131          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEAE (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa GN=msrB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.188e-22
Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGDA 421
            K  + WR  L+ EQF I R  GTE   +GEY+     G Y+C  CGTAL+ S  K+DSG GWP++++ +     R  D       R E+ C  C  HLGHVF       PT  R+C+NS S+K +P ++
Sbjct:    6 KPLDSWREELTEEQFHICRLGGTERAFSGEYHATKTPGIYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDG--PRPTGLRYCINSASLKLVPRES 132          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEAB (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=msrB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.188e-22
Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGDA 421
            K  + WR  L+ EQF I R  GTE   +GEY+     G Y+C  CGTAL+ S  K+DSG GWP++++ +     R  D       R E+ C  C  HLGHVF       PT  R+C+NS S+K +P ++
Sbjct:    6 KPLDSWREELTEEQFHICRLGGTERAFSGEYHATKTPGIYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDG--PRPTGLRYCINSASLKLVPRES 132          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_PSEA8 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa (strain LESB58) GN=msrB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.188e-22
Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGDA 421
            K  + WR  L+ EQF I R  GTE   +GEY+     G Y+C  CGTAL+ S  K+DSG GWP++++ +     R  D       R E+ C  C  HLGHVF       PT  R+C+NS S+K +P ++
Sbjct:    6 KPLDSWREELTEEQFHICRLGGTERAFSGEYHATKTPGIYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDG--PRPTGLRYCINSASLKLVPRES 132          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: YL56_CAEEL (Uncharacterized protein F44E2.6 OS=Caenorhabditis elegans GN=F44E2.6 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 54/123 (43.90%), Postives = 71/123 (57.72%), Query Frame = 2
Query:   50 EEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYE--GLPGAINRSPDPDG--RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            + EW+++L  E +R+ R+ GTE   TG +N  +  G Y C  CG+ L+ S  KF +GCGWPAF E  G    I R  D      RTE+ C  C  HLGHVF  +G K  T ER+C+NSV + F
Sbjct:   27 QTEWKSVLPNEVYRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPAFSESVGQDANIVRIVDRSHGMHRTEVRCKTCDAHLGHVF-NDGPKETTGERYCINSVCMAF 148          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURPS (Peptide methionine sulfoxide reductase msrB OS=Burkholderia pseudomallei GN=msrB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 2
Query:   17 MTAAADSPQ----KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            M+   D P+    K + E R  L+P Q+ + +   TEP  TGEY      G Y+C  CGTAL++S  KF SGCGWP++++ + G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:    1 MSGDRDDPRYPYPKDDAELRRRLTPMQYEVTQHAATEPPFTGEYTDTEDAGIYHCVVCGTALFESGAKFHSGCGWPSYFKPIDGEVIDEKMDYTHGMTRVEVRCNQCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURMS (Peptide methionine sulfoxide reductase msrB OS=Burkholderia mallei (strain SAVP1) GN=msrB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 2
Query:   17 MTAAADSPQ----KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            M+   D P+    K + E R  L+P Q+ + +   TEP  TGEY      G Y+C  CGTAL++S  KF SGCGWP++++ + G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:    1 MSGDRDDPRYPYPKDDAELRRRLTPMQYEVTQHAATEPPFTGEYTDTEDAGIYHCVVCGTALFESGAKFHSGCGWPSYFKPIDGEVIDEKMDYTHGMTRVEVRCNQCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURMA (Peptide methionine sulfoxide reductase msrB OS=Burkholderia mallei GN=msrB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 2
Query:   17 MTAAADSPQ----KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            M+   D P+    K + E R  L+P Q+ + +   TEP  TGEY      G Y+C  CGTAL++S  KF SGCGWP++++ + G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:    1 MSGDRDDPRYPYPKDDAELRRRLTPMQYEVTQHAATEPPFTGEYTDTEDAGIYHCVVCGTALFESGAKFHSGCGWPSYFKPIDGEVIDEKMDYTHGMTRVEVRCNQCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURM9 (Peptide methionine sulfoxide reductase msrB OS=Burkholderia mallei (strain NCTC 10229) GN=msrB PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.397e-21
Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 2
Query:   17 MTAAADSPQ----KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            M+   D P+    K + E R  L+P Q+ + +   TEP  TGEY      G Y+C  CGTAL++S  KF SGCGWP++++ + G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:    1 MSGDRDDPRYPYPKDDAELRRRLTPMQYEVTQHAATEPPFTGEYTDTEDAGIYHCVVCGTALFESGAKFHSGCGWPSYFKPIDGEVIDEKMDYTHGMTRVEVRCNQCGAHLGHVFE-DGPRDKTGLRYCINSAALNF 136          
The following BLAST results are available for this feature:
BLAST of EY753572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_PSEA72.814e-2242.06Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_AZOVD3.675e-2240.15Peptide methionine sulfoxide reductase msrB OS=Azo... [more]
MSRB_PSEAE8.188e-2240.31Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEAB8.188e-2240.31Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEA88.188e-2240.31Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
YL56_CAEEL1.397e-2143.90Uncharacterized protein F44E2.6 OS=Caenorhabditis ... [more]
MSRB_BURPS1.397e-2139.42Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_BURMS1.397e-2139.42Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_BURMA1.397e-2139.42Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_BURM91.397e-2139.42Peptide methionine sulfoxide reductase msrB OS=Bur... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753572 ID=EY753572; Name=EY753572; organism=Citrus sinensis; type=EST; length=614bp
ATTGAAACCTATCCCCATGACTGCAGCAGCAGATTCCCCTCAGAAAACCG
AGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCAGTTTAGGATTCTACGC
CAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGTACAACAAGTTGTATGC
GGATGGGTTTTACAACTGTGCTGGCTGTGGAACTGCGCTTTACAAGTCTG
TTACCAAATTCGATTCTGGATGTGGGTGGCCAGCTTTCTATGAAGGTCTT
CCTGGAGCCATAAATCGCTCCCCTGATCCTGATGGAAGGAGAACCGAGAT
AACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACGTCTTCAAAGGGGAGG
GATTCAAAACGCCTACAGATGAACGCCACTGTGTCAATAGTGTTTCAATT
AAGTTTATTCCAGGTGATGCTCCTGCTTCATCATGAAGAATGTAAGACTG
TCATGGGGTTGTTGAATAAGATTTGACTGTTTGTCACTTCTGCCAATTGT
TTTTGGCTTTAATGTCCTAGACATGGTGTTGTTTGTATAATTATTACGCG
GCCAATATTAGCCTATGCCATAGTATAAACCACTTTGTTTGGTTTGCAAA
AAAAAAAAAAAAAA
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