EY753572

Overview
NameEY753572
Unique NameEY753572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1842 contig Csv1_Contig1842:30..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_VIBCM (Peptide methionine sulfoxide reductase msrB OS=Vibrio cholerae serotype O1 (strain M66-2) GN=msrB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.544e-20
Identity = 57/124 (45.97%), Postives = 73/124 (58.87%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDGR---RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            K +E WR  L+ E F + RQ+GTE   +G+       G Y+C  C +AL+ S  K+DSGCGWP+F   +   + R  D       RTEI CAAC  HLGHVF+ +G KT T  R CVNSVS+ F
Sbjct:   23 KPDEYWREHLTEEAFYVCRQQGTEAPYSGKLLHNKDTGLYHCTCCQSALFSSENKYDSGCGWPSFDAPINEQVIRFLDDFSHGMVRTEIRCAACDSHLGHVFE-DGPKT-TGLRFCVNSVSLIF 144          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_VIBCH (Peptide methionine sulfoxide reductase msrB OS=Vibrio cholerae GN=msrB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.544e-20
Identity = 57/124 (45.97%), Postives = 73/124 (58.87%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDGR---RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            K +E WR  L+ E F + RQ+GTE   +G+       G Y+C  C +AL+ S  K+DSGCGWP+F   +   + R  D       RTEI CAAC  HLGHVF+ +G KT T  R CVNSVS+ F
Sbjct:   23 KPDEYWREHLTEEAFYVCRQQGTEAPYSGKLLHNKDTGLYHCTCCQSALFSSENKYDSGCGWPSFDAPINEQVIRFLDDFSHGMVRTEIRCAACDSHLGHVFE-DGPKT-TGLRFCVNSVSLIF 144          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_VIBC3 (Peptide methionine sulfoxide reductase msrB OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=msrB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.544e-20
Identity = 57/124 (45.97%), Postives = 73/124 (58.87%), Query Frame = 2
Query:   44 KTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDGR---RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            K +E WR  L+ E F + RQ+GTE   +G+       G Y+C  C +AL+ S  K+DSGCGWP+F   +   + R  D       RTEI CAAC  HLGHVF+ +G KT T  R CVNSVS+ F
Sbjct:   23 KPDEYWREHLTEEAFYVCRQQGTEAPYSGKLLHNKDTGLYHCTCCQSALFSSENKYDSGCGWPSFDAPINEQVIRFLDDFSHGMVRTEIRCAACDSHLGHVFE-DGPKT-TGLRFCVNSVSLIF 144          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ECO45 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.017e-20
Identity = 55/125 (44.00%), Postives = 67/125 (53.60%), Query Frame = 2
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE L     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPLSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_SALA4 (Peptide methionine sulfoxide reductase msrB OS=Salmonella agona (strain SL483) GN=msrB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.634e-20
Identity = 54/125 (43.20%), Postives = 68/125 (54.40%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            Q + EE +  LS  QF + + +GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FY+ +     R  D      +R EI C  C  HLGHVF       PT ER+CVNS S+ F
Sbjct:    4 QPSAEELKKKLSEMQFYVTQDRGTEPPFTGRLLHNKRDGVYHCLVCDMPLFHSHTKYDSGCGWPSFYQPVSEEAIRYIDDFSHGMQRVEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLAF 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_BURS3 (Peptide methionine sulfoxide reductase msrB OS=Burkholderia sp. (strain 383) GN=msrB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.634e-20
Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            +K + E R  L+P Q+ + +   TE   TGEY     DG Y C  C T L++S +KF SGCGWP++++ L G  I+   D      R E+ C  CG HLGHVF+ +G +  T  R+C+NS ++ F
Sbjct:   13 EKDDAELRRRLTPMQYEVTQHAATERAFTGEYTDTEDDGIYKCVVCSTPLFESGSKFHSGCGWPSYFKPLNGEVIDEKVDYSHGMVRVEVRCNHCGAHLGHVFE-DGPRDQTGLRYCINSAALNF 136          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_SALAR (Peptide methionine sulfoxide reductase msrB OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=msrB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.440e-20
Identity = 54/125 (43.20%), Postives = 68/125 (54.40%), Query Frame = 2
Query:   41 QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            Q + EE +  LS  QF + + +GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FY+ +     R  D      +R EI C  C  HLGHVF       PT ER+CVNS S+ F
Sbjct:    4 QLSAEELKKKLSEMQFYVTQNRGTEPPFTGRLLHNKRDGVYHCLVCEAPLFHSHTKYDSGCGWPSFYQPVSKEAIRYIDDFSHGMQRVEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLAF 126          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_THISH (Peptide methionine sulfoxide reductase msrB OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 53/134 (39.55%), Postives = 74/134 (55.22%), Query Frame = 2
Query:   17 MTAAADSP-QKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG---AINRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 406
            M+   D P Q T+E  R  LSPE + + R+ GTEP  +G Y   +  G Y+C  C   L+ S  KFDSG GWP++++ + G   ++ R       R E+ CA C  HLGHVF       PT  R+C+NS+S+ F
Sbjct:    1 MSNNQDRPGQITDESLRERLSPEAYAVTRRAGTEPPFSGRYYDHHETGIYHCICCDAPLFSSEHKFDSGSGWPSYWQPVSGDALSVVRDTSHGMIREEVRCARCDAHLGHVFPDG--PPPTGLRYCINSLSLDF 132          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_SHISS (Peptide methionine sulfoxide reductase msrB OS=Shigella sonnei (strain Ss046) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130          
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_SHIFL (Peptide methionine sulfoxide reductase msrB OS=Shigella flexneri GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130          
The following BLAST results are available for this feature:
BLAST of EY753572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_VIBCM1.544e-2045.97Peptide methionine sulfoxide reductase msrB OS=Vib... [more]
MSRB_VIBCH1.544e-2045.97Peptide methionine sulfoxide reductase msrB OS=Vib... [more]
MSRB_VIBC31.544e-2045.97Peptide methionine sulfoxide reductase msrB OS=Vib... [more]
MSRB_ECO452.017e-2044.00Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_SALA42.634e-2043.20Peptide methionine sulfoxide reductase msrB OS=Sal... [more]
MSRB_BURS32.634e-2040.00Peptide methionine sulfoxide reductase msrB OS=Bur... [more]
MSRB_SALAR3.440e-2043.20Peptide methionine sulfoxide reductase msrB OS=Sal... [more]
MSRB_THISH4.493e-2039.55Peptide methionine sulfoxide reductase msrB OS=Thi... [more]
MSRB_SHISS4.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Shi... [more]
MSRB_SHIFL4.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Shi... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753572 ID=EY753572; Name=EY753572; organism=Citrus sinensis; type=EST; length=614bp
ATTGAAACCTATCCCCATGACTGCAGCAGCAGATTCCCCTCAGAAAACCG
AGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCAGTTTAGGATTCTACGC
CAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGTACAACAAGTTGTATGC
GGATGGGTTTTACAACTGTGCTGGCTGTGGAACTGCGCTTTACAAGTCTG
TTACCAAATTCGATTCTGGATGTGGGTGGCCAGCTTTCTATGAAGGTCTT
CCTGGAGCCATAAATCGCTCCCCTGATCCTGATGGAAGGAGAACCGAGAT
AACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACGTCTTCAAAGGGGAGG
GATTCAAAACGCCTACAGATGAACGCCACTGTGTCAATAGTGTTTCAATT
AAGTTTATTCCAGGTGATGCTCCTGCTTCATCATGAAGAATGTAAGACTG
TCATGGGGTTGTTGAATAAGATTTGACTGTTTGTCACTTCTGCCAATTGT
TTTTGGCTTTAATGTCCTAGACATGGTGTTGTTTGTATAATTATTACGCG
GCCAATATTAGCCTATGCCATAGTATAAACCACTTTGTTTGGTTTGCAAA
AAAAAAAAAAAAAA
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