EY753572

Overview
NameEY753572
Unique NameEY753572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1842 contig Csv1_Contig1842:30..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_SHIF8 (Peptide methionine sulfoxide reductase msrB OS=Shigella flexneri serotype 5b (strain 8401) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_SHIDS (Peptide methionine sulfoxide reductase msrB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSDMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGVQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_SHIBS (Peptide methionine sulfoxide reductase msrB OS=Shigella boydii serotype 4 (strain Sb227) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ECOSM (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ECOSE (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain SE11) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLU (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLI (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain K12) GN=msrB PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLC (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ECOL6 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O6 GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753572 vs. ExPASy Swiss-Prot
Match: MSRB_ECOL5 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 2 
Query:   53 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 418
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
The following BLAST results are available for this feature:
BLAST of EY753572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_SHIF84.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Shi... [more]
MSRB_SHIDS4.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Shi... [more]
MSRB_SHIBS4.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Shi... [more]
MSRB_ECOSM4.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOSE4.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLU4.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLI4.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLC4.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOL64.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOL54.493e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753572 ID=EY753572; Name=EY753572; organism=Citrus sinensis; type=EST; length=614bp
ATTGAAACCTATCCCCATGACTGCAGCAGCAGATTCCCCTCAGAAAACCG
AGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCAGTTTAGGATTCTACGC
CAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGTACAACAAGTTGTATGC
GGATGGGTTTTACAACTGTGCTGGCTGTGGAACTGCGCTTTACAAGTCTG
TTACCAAATTCGATTCTGGATGTGGGTGGCCAGCTTTCTATGAAGGTCTT
CCTGGAGCCATAAATCGCTCCCCTGATCCTGATGGAAGGAGAACCGAGAT
AACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACGTCTTCAAAGGGGAGG
GATTCAAAACGCCTACAGATGAACGCCACTGTGTCAATAGTGTTTCAATT
AAGTTTATTCCAGGTGATGCTCCTGCTTCATCATGAAGAATGTAAGACTG
TCATGGGGTTGTTGAATAAGATTTGACTGTTTGTCACTTCTGCCAATTGT
TTTTGGCTTTAATGTCCTAGACATGGTGTTGTTTGTATAATTATTACGCG
GCCAATATTAGCCTATGCCATAGTATAAACCACTTTGTTTGGTTTGCAAA
AAAAAAAAAAAAAA
back to top