EY753554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.733e-16 Identity = 52/147 (35.37%), Postives = 73/147 (49.66%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + ++ +++ +G+ EG R V P+ G D YPGG FDPL Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYR---------VGGGPLG-----EGLDKIYPGGA-FDPL 197 HSP 2 Score: 23.0978 bits (48), Expect = 2.733e-16 Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GP+ Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPI 239
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.743e-16 Identity = 51/139 (36.69%), Postives = 71/139 (51.08%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + + ++ I WA + ++ G V + G D YPGG FDPL Sbjct: 38 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WA-----SQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA-FDPL 169 HSP 2 Score: 23.0978 bits (48), Expect = 2.743e-16 Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GP+ Sbjct: 187 KNGRLAMFSMFGFFVQAIVTGKGPI 211
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.191e-16 Identity = 55/146 (37.67%), Postives = 69/146 (47.26%), Query Frame = 2 Query: 254 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA--GELEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 WFPG P LDGS PGDFGFDPLGL + PE +SEI HCRWAML G+ +PE L + W G+ Y + + T+ +E + I +AE +R + DP YPGG FDPL Sbjct: 48 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR--------TMEKDP---------EKKKYPGGA-FDPL 175
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.610e-16 Identity = 63/177 (35.59%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 200 GTRSVSVSAAAA--DPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 G +SV+ S + P+R L+ F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG +L + ++ ++I +G EG R A P TDPI YPGG FDPL Sbjct: 50 GKKSVAASIDSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG--GPLGEVTDPI------------YPGGN-FDPL 210 HSP 2 Score: 23.0978 bits (48), Expect = 4.610e-16 Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GP+ Sbjct: 228 KNGRLAMFSMFGFFVQAIVTGKGPI 252
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.616e-16 Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 2 Query: 194 TAGT-RSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667 TAG ++V S+ P+R + F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + + ++ I WA +I G V +++ G +G YPGG FDPL Sbjct: 38 TAGKPKTVQSSSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVILMGAVE------GYRIAGGPLGEVVDPLYPGGS-FDPL 199 HSP 2 Score: 23.8682 bits (50), Expect = 4.616e-16 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPL 241
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.618e-16 Identity = 54/161 (33.54%), Postives = 76/161 (47.20%), Query Frame = 2 Query: 239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P+RP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+ W+ AG L + ++ V+++ +G+ EG R V P+ G D YPGG FDPL Sbjct: 50 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR---------VGGGPLG-----EGLDKVYPGGA-FDPL 195 HSP 2 Score: 23.0978 bits (48), Expect = 4.618e-16 Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GP+ Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPI 237
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.618e-16 Identity = 54/161 (33.54%), Postives = 76/161 (47.20%), Query Frame = 2 Query: 239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P+RP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+ W+ AG L + ++ V+++ +G+ EG R V P+ G D YPGG FDPL Sbjct: 50 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR---------VGGGPLG-----EGLDKVYPGGA-FDPL 195 HSP 2 Score: 23.0978 bits (48), Expect = 4.618e-16 Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GP+ Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPI 237
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 5.444e-16 Identity = 55/153 (35.95%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P+RP + P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL K G+ W+ AG L+Y + + ++ I WA ++ G V + G D YPGG FDPL Sbjct: 51 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAI-WA-----CQVVLMGAVEGYRVGGGPLGEGLDQLYPGGA-FDPL 196
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.000e-16 Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + + ++ I WA ++ G + + TD YPGG FDPL Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVVLMGAIEGYRVAGGPLGEVTDPLYPGGS-FDPL 199 HSP 2 Score: 23.8682 bits (50), Expect = 6.000e-16 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPL 241
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.788e-16 Identity = 62/177 (35.03%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 200 GTRSVSVSAAAA--DPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 G +SV+ S + P+R ++ F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG +L + ++ ++I +G EG R A P TDPI YPGG FDPL Sbjct: 50 GRKSVAASIDSPWYGPDRVMYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG--GPLGEVTDPI------------YPGGN-FDPL 210 HSP 2 Score: 23.0978 bits (48), Expect = 7.788e-16 Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GP+ Sbjct: 228 KNGRLAMFSMFGFFVQAIVTGKGPI 252 The following BLAST results are available for this feature:
BLAST of EY753554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753554 ID=EY753554; Name=EY753554; organism=Citrus sinensis; type=EST; length=857bpback to top |