EY753554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.802e-16 Identity = 53/148 (35.81%), Postives = 73/148 (49.32%), Query Frame = 2 Query: 272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L+Y + + ++ V+++ +G EG R A P DP+ YPGG FDPL Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG--GPLGEVVDPL------------YPGGA-FDPL 197 HSP 2 Score: 23.8682 bits (50), Expect = 7.802e-16 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPL 239
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.285e-16 Identity = 55/159 (34.59%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667 P+R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + + ++ I WA ++ G V +++ G +G YPGG FDPL Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAI-WA-----CQVVLMGAVE------GYRIAGGPLGEVVDPLYPGGS-FDPL 197
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 9.285e-16 Identity = 57/161 (35.40%), Postives = 80/161 (49.69%), Query Frame = 2 Query: 239 PNRPLWF-PGSTP-PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P+RP + P S P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + ++ +++ +G+ EG R V P+ G D YPGG FDPL Sbjct: 52 PDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------VGGGPLG-----EGLDPIYPGGA-FDPL 197
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.013e-15 Identity = 57/153 (37.25%), Postives = 75/153 (49.02%), Query Frame = 2 Query: 257 FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 F G TP +L+G GD+G+D GL SDPET N + E++H RWAMLGA G PELL K G+ W+ AG L+Y + + ++ +++ +G EG R A P TDPI YPGG FDPL Sbjct: 64 FSGETP-SYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVTDPI------------YPGGS-FDPL 200 HSP 2 Score: 23.8682 bits (50), Expect = 1.013e-15 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 218 KNGRLAMFSMFGFFVQAIVTGKGPL 242
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.014e-15 Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + + ++ I WA ++ G V + + D YPGG FDPL Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVVLMGAVEGYRVAGEPLGEVVDPLYPGGS-FDPL 198 HSP 2 Score: 23.0978 bits (48), Expect = 1.014e-15 Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V + G GPL Sbjct: 216 KNGRLAMFSMFGFFVQALVTGKGPL 240
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-15 Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + + ++ I WA ++ G V +++ G +G YPGG FDPL Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVVLMGAVE------GYRIAGGPLGEVVDPLYPGGS-FDPL 199 HSP 2 Score: 23.8682 bits (50), Expect = 1.014e-15 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPL 241
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-15 Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + + ++ I WA ++ G V +++ G +G YPGG FDPL Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVVLMGAVE------GYRIAGGPLGEVVDPLYPGGS-FDPL 197 HSP 2 Score: 23.8682 bits (50), Expect = 1.014e-15 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPL 239
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-15 Identity = 52/145 (35.86%), Postives = 73/145 (50.34%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + + ++ I WA +I G V +++ G +G YPGG FDPL Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVILMGAVE------GYRVAGGPLGEVVDPLYPGGS-FDPL 197 HSP 2 Score: 23.8682 bits (50), Expect = 1.014e-15 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPL 239
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.014e-15 Identity = 53/148 (35.81%), Postives = 73/148 (49.32%), Query Frame = 2 Query: 272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L+Y + + ++ V+++ +G EG R A P DP+ YPGG FDPL Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG--GPLGEVVDPL------------YPGGS-FDPL 193 HSP 2 Score: 23.8682 bits (50), Expect = 1.014e-15 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 211 KNGRLAMFSMFGFFVQAIVTGKGPL 235
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.213e-15 Identity = 43/109 (39.45%), Postives = 55/109 (50.46%), Query Frame = 2 Query: 254 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSW--YTAGELEYFTDTT------TLFIVEMIFIGWAEGRR 556 W PG P +LDGS PGDFGFD LGLG P L +SE++HCRWAML GI +PE L + W G+ Y T+ +E + I + E +R Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR 157 The following BLAST results are available for this feature:
BLAST of EY753554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753554 ID=EY753554; Name=EY753554; organism=Citrus sinensis; type=EST; length=857bpback to top |