EY753554

Overview
NameEY753554
Unique NameEY753554
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.317e-15
Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 
Query:  275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667
            P +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PELL + G+      W+ AG        L+Y  + + +    ++ I WA       ++  G V        +++ G  +G      YPGG  FDPL
Sbjct:   68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVVLMGAVE------GYRVAGGPLGEVVDPLYPGGS-FDPL 199

HSP 2 Score: 23.8682 bits (50), Expect = 1.317e-15
Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  V  I  G GPL
Sbjct:  217 KNGRLAMFSMFGFFVQAIVTGKGPL 241
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.317e-15
Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 
Query:  275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667
            P +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PELL + G+      W+ AG        L+Y  + + +    ++ I WA       ++  G V        +++ G  +G      YPGG  FDPL
Sbjct:   68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVVLMGAVE------GYRVAGGPLGEVVDPLYPGGS-FDPL 199

HSP 2 Score: 23.8682 bits (50), Expect = 1.317e-15
Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  V  I  G GPL
Sbjct:  217 KNGRLAMFSMFGFFVQAIVTGKGPL 241
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.317e-15
Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 
Query:  275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667
            P +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PELL + G+      W+ AG        L+Y  + + +    ++ I WA       ++  G V        +++ G  +G      YPGG  FDPL
Sbjct:   67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVVLMGAVE------GYRVAGGPLGEVVDPLYPGGS-FDPL 198

HSP 2 Score: 23.8682 bits (50), Expect = 1.317e-15
Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  V  I  G GPL
Sbjct:  216 KNGRLAMFSMFGFFVQAIVTGKGPL 240
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.318e-15
Identity = 51/146 (34.93%), Postives = 74/146 (50.68%), Query Frame = 2 
Query:  272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667
            PP +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL++ G+      W+ AG        L+Y  + + +    ++ I WA       ++  G V        +++ G  +G      YPGG  FDPL
Sbjct:   62 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAI-WA-----CQVVLMGAVE------GYRIAGGPLGEVVDPLYPGGS-FDPL 194

HSP 2 Score: 23.8682 bits (50), Expect = 1.318e-15
Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  V  I  G GPL
Sbjct:  212 KNGRLAMFSMFGFFVQAIVTGKGPL 236
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.713e-15
Identity = 53/159 (33.33%), Postives = 78/159 (49.06%), Query Frame = 2 
Query:  239 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667
            P+R L+       PP +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL + G+      W+ AG        L+Y  + + +    ++ I WA       ++  G +        +++ G  +G      YPGG  FDPL
Sbjct:   52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAI-WA-----CQVVLMGAIE------GYRVAGGPLGEVVDPLYPGGT-FDPL 197

HSP 2 Score: 23.8682 bits (50), Expect = 1.713e-15
Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  V  I  G GPL
Sbjct:  215 KNGRLAMFSMFGFFVQAIVTGKGPL 239
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.226e-15
Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 2 
Query:  275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667
            P +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL+K G+      W+ AG        L+Y  +   +    ++ I WA       +I+   V   P+       G D  YPGG  FDPL
Sbjct:   65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAI-WATQVVLMGLIEGYRVGGGPLG-----EGLDPLYPGGA-FDPL 196

HSP 2 Score: 23.0978 bits (48), Expect = 2.226e-15
Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  V  I  G GP+
Sbjct:  214 KNGRLAMFSMFGFFVQAIVTGKGPI 238
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.246e-15
Identity = 53/148 (35.81%), Postives = 73/148 (49.32%), Query Frame = 2 
Query:  272 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667
            PP +L G  PGD+G+D  GL +DPET   N + E++H  WAMLGA G   PELL++ G+      W+ AG        L+Y  + +         ++  +++ +G  EG R A    P    TDPI            YPGG  FDPL
Sbjct:    6 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPI------------YPGGS-FDPL 138

HSP 2 Score: 23.8682 bits (50), Expect = 2.246e-15
Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  V  I  G GPL
Sbjct:  156 KNGRLAMFSMFGFFVQAIVTGKGPL 180
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.758e-15
Identity = 50/145 (34.48%), Postives = 72/145 (49.66%), Query Frame = 2 
Query:  275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667
            P +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PEL  + G+      W+ AG        L+Y  + + +    ++ I WA       ++  G V        +++ G  +G      YPGG  FDPL
Sbjct:   67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----CQVVLMGAVE------GYRVAGGPLGEVIDPLYPGGS-FDPL 198

HSP 2 Score: 23.8682 bits (50), Expect = 3.758e-15
Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  V  I  G GPL
Sbjct:  216 KNGRLAMFSMFGFFVQAIVTGKGPL 240
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.884e-15
Identity = 52/147 (35.37%), Postives = 71/147 (48.30%), Query Frame = 2 
Query:  275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667
            P +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PEL  + G+      W  AG        L+Y  + +         ++  +++ +G  EG R A    P  V  DP+            YPGG  FDPL
Sbjct:   68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAG--GPLGVVVDPL------------YPGGS-FDPL 199

HSP 2 Score: 23.483 bits (49), Expect = 4.884e-15
Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  +  I  G GPL
Sbjct:  217 KNGRLAMFSMFGFFIQAIVTGKGPL 241
[Close]
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.244e-15
Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2 
Query:  275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667
            P +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL++ G+      W+ AG        L+Y  + + +    ++ I WA       +I  G V        +++ G  +G      YPGG  FDPL
Sbjct:   70 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----TQVILMGAVE------GYRIAGGPLGEVVDPLYPGGS-FDPL 201

HSP 2 Score: 23.8682 bits (50), Expect = 8.244e-15
Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 
Query:  720 KNGXLPMLAGMGAXVXHIYPGPGPL 794
            KNG L M +  G  V  I  G GPL
Sbjct:  219 KNGRLAMFSMFGFFVQAIVTGKGPL 243
The following BLAST results are available for this feature:
BLAST of EY753554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
CB25_TOBAC1.317e-1535.17Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB24_TOBAC1.317e-1535.17Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC1.317e-1535.17Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB21_MAIZE1.318e-1534.93Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB29_MAIZE1.713e-1533.33Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB21_LEMGI2.226e-1537.41Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB22_CUCSA2.246e-1535.81Chlorophyll a-b binding protein of LHCII type 1 (F... [more]
CB24_PETSP3.758e-1534.48Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB22_PETSP4.884e-1535.37Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB22_PEA8.244e-1535.17Chlorophyll a-b binding protein AB80, chloroplasti... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-B12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753554 ID=EY753554; Name=EY753554; organism=Citrus sinensis; type=EST; length=857bp
TTACACTCACACAAACGCCAGTCATAATTTTGCTGAAAGCCTTTGCCTGG
TAGTAAAAATGGCTTCCGTTTGTGCTTCCCCTGCCGTTGCAGCCATCTCA
TCCCCCAGTTCTCAGAAGAGTAGATCAGTTGCGGGAGCAACAAAGGCTTC
TTTCCTTGGTGGGAAGAAGCTGAAATTGAGAAAAAACGGAGCAACAGCGG
GAACACGATCGGTTTCAGTGAGTGCGGCTGCAGCTGATCCTAACAGGCCT
CTCTGGTTCCCAGGCAGCACTCCTCCTGAATGGCTCGATGGTAGCCTCCC
CGGAGACTTCGGCTTCGATCCTCTTGGTCTTGGATCTGATCCTGAGACGC
TGAGATGGAACGTGCAATCAGAAATTGTGCACTGCAGATGGGCAATGTTA
GGAGCTGCAGGAATTTTCATTCCGGAATTGTTAACAAAACTTGGAATCCT
CAACACTCCATCCTGGTACACAGCTGGGGAGCTAGAGTACTTCACAGACA
CCACCACCCTGTTCATTGTTGAGATGATATTCATAGGCTGGGCAGAGGGC
AGACGGTGGGCCGACATTATAAAGCCAGGCTGTGTGAACACTGACCCGAT
CTTTCCCCAACACAAGCTCACCGGCACCGATGTTGGGTACCCAGGTGGGC
TTTGGTTTGACCCACTTGGCTGGGGATCCGGTTCGCCCGAGAGGTAAAGG
AGCTGAGGACTAAGGAGACAAGAATGGAANATTGCCTATGTTGGCTGGGA
TGGGTGCTNGGGTCCANCACATTTACCCCGGCCCCGGCCCATTGACATCT
CATTGCTCACCTGGCTGATCCTGGCATGCCACCGTTTTTGCTGCTCACCC
CCAGTGA
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