EY753554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.969e-14 Identity = 50/148 (33.78%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK-LGI-LNTPSWYTAGE-------LEYFTDTTTLFI--------VEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P +L+G PGD+G+D GL +DPE N E++H RWAMLGA G PE+L K +G+ P W+ AG L+Y + + +++ +G EG R + G G D+ YPGG +FDPL Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVG-------------EGNDL-YPGGQYFDPL 200 HSP 2 Score: 23.8682 bits (50), Expect = 3.969e-14 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 218 KNGRLAMFSMFGFFVQAIVTGKGPL 242
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.095e-14 Identity = 49/139 (35.25%), Postives = 67/139 (48.20%), Query Frame = 2 Query: 239 PNRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPS--WYTAGELEYFTDTTTLF------------IVEMIFIGWAE------GRRWADIIKPG 580 P+R ++ P S PE+L+G + GD+G+DP GLG PE E++H RWAMLGAAG IPE L K G P W+ G L +T F + E++ +G AE G + D + PG Sbjct: 65 PDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPG 203
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.159e-14 Identity = 55/172 (31.98%), Postives = 80/172 (46.51%), Query Frame = 2 Query: 194 TAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSW-------YTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667 TA T+ V D + L P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W ++ G L+Y + + + ++ I WA ++ G V +++ G +G YPGG FDPL Sbjct: 38 TAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAI-WA-----CQVVLMGAVE------GYRVAGGPLGEVVDPLYPGGS-FDPL 196 HSP 2 Score: 23.8682 bits (50), Expect = 5.159e-14 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPL 238
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.700e-14 Identity = 48/145 (33.10%), Postives = 70/145 (48.28%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVG------YPGGLWFDPL 667 P +L G PGD+G+D GL +DP T N + E++HCRW MLGA G PEL + G+ W+ AG L+Y + + + ++ I WA ++ G V +++ G +G YPGG FDPL Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAI-WA-----CQVVLMGAVE------GYRVAGGPLGEVIDPLYPGGS-FDPL 198 HSP 2 Score: 23.8682 bits (50), Expect = 6.700e-14 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPL 240
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.707e-14 Identity = 49/148 (33.11%), Postives = 70/148 (47.30%), Query Frame = 2 Query: 275 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILN--TPSWYTAGE-------LEYFTDTTTLFI--------VEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 P +L+G PGD+G+D GL +DPE N E++H RWAMLGA G PE+L K ++ P W+ AG L+Y + + +++ +G EG R + G G D+ YPGG +FDPL Sbjct: 64 PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVG-------------EGNDL-YPGGQYFDPL 197 HSP 2 Score: 23.8682 bits (50), Expect = 8.707e-14 Identity = 12/25 (48.00%), Postives = 13/25 (52.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L M + G V I G GPL Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPL 239
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.472e-13 Identity = 49/142 (34.51%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 239 PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLF--------IVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 607 PNR W + + P +L G PGD+G+D GL +DPET + + E++H RWAMLGA G PELL K G W+ AG L+Y + + + V++I +G EG R P DP++P Sbjct: 39 PNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNG--GPAGEGLDPLYP 178 HSP 2 Score: 20.4014 bits (41), Expect = 1.472e-13 Identity = 10/25 (40.00%), Postives = 12/25 (48.00%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGPL 794 KNG L + G V I G GP+ Sbjct: 203 KNGRLASFSMFGFFVQAIVTGKGPV 227
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.472e-13 Identity = 60/181 (33.15%), Postives = 86/181 (47.51%), Query Frame = 2 Query: 194 TAGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK-LGI-LNTPSWYTAGE-------LEYFTDTTTL--------FIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPQHKLTGTDVGYPGGLWFDPL 667 T R +V AA + P+R + F + PE+L G PGD+G+D GL +DP+T + E++H RWA+LGA GI PELL++ G+ P W+ AG L Y + + + V+++ +G AE R A+ G L D YPGG FDPL Sbjct: 18 TRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR-ANGGSEGF-----------LDDLDTLYPGGP-FDPL 185 HSP 2 Score: 24.2534 bits (51), Expect = 1.472e-13 Identity = 14/31 (45.16%), Postives = 16/31 (51.61%), Query Frame = 3 Query: 720 KNGXLPMLAGMGAXVXHIYPGPGP---LTSH 803 KNG L M + +G V I G GP LT H Sbjct: 203 KNGRLAMFSCLGFFVQAIVTGKGPVQNLTDH 233
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.228e-12 Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 2 Query: 191 ATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 433 A T +++ A R LWFP PP +L G GD GFDP GL +DP T +E+ HCR +ML G +PELL Sbjct: 353 ANITTNLAMFASSGAKEERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL 433 HSP 2 Score: 70.0922 bits (170), Expect = 1.812e-11 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 2 Query: 242 NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGE 481 + PLWFP + P WL+G GD GFDP GL +DP+T +E+ H R AML G +P+ L K GI WY A + Sbjct: 1 SHPLWFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK-GI-----WYEAAQ 74
BLAST of EY753554 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 2 Query: 269 TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG 478 +PP +L G PGD+G+D GL +DPET N + E++HCRWA+ G PELL + G+ W+ AG Sbjct: 63 SPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAG 133 The following BLAST results are available for this feature:
BLAST of EY753554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753554 ID=EY753554; Name=EY753554; organism=Citrus sinensis; type=EST; length=857bpback to top |