EY753528

Overview
NameEY753528
Unique NameEY753528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753528_ssr373 microsatellite EY753528_ssr373:373..392. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.438e-24
Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 1
Query:  415 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            Q LP VD+FV TAD + EPP + ++T+LS++A +YP  K++ Y+SDD  S L FY+L EAS FAK W+PFCK+YN++ R+P  YF
Sbjct:  100 QNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKKWLPFCKRYNIEPRSPAAYF 184          

HSP 2 Score: 30.4166 bits (67), Expect = 2.438e-24
Identity = 12/39 (30.77%), Postives = 18/39 (46.15%), Query Frame = 2
Query:  182 AWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 298
            AW      E  F   W++  + +W P   +T+  RL ER
Sbjct:   59 AWLGMAAAELWFAVYWVIAQSVRWRPFRRRTFRDRLAER 97          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.333e-24
Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = 1
Query:  418 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            +LP +D+FV+TAD E EPP++T NT+LS+LAVDYPV KLACY+SDD  + L F +L + + FA  WVPFC+K+N++ R P  YF
Sbjct:  398 DLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYF 481          

HSP 2 Score: 21.1718 bits (43), Expect = 5.333e-24
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 2
Query:  185 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 298
            W ++  CE  F   W+L    K  P+   T    L+ER
Sbjct:  347 WGMSTTCELWFALSWLLDQLPKLCPVNRLTDLGVLKER 384          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.335e-24
Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 1
Query:  418 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            +LP +D+FV+TAD E EP + T  T+LS+LAVDYPV KLACYVSDD  + L F ++ EA+ FA +WVPFCKK++++ R P  YF
Sbjct:  377 DLPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYF 460          

HSP 2 Score: 26.1794 bits (56), Expect = 5.335e-24
Identity = 12/38 (31.58%), Postives = 20/38 (52.63%), Query Frame = 2
Query:  185 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 298
            W ++ +CE  F F W+L +  K  P+   T    L+E+
Sbjct:  326 WGMSIVCELWFAFSWLLDMLPKVNPVNRSTDLAVLKEK 363          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.720e-24
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 1
Query:  421 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L + ++FA+ WVPFCKK+N++ RAP  YF
Sbjct:  353 LAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKKFNIEPRAPEWYF 435          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.471e-24
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 1
Query:  421 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            L PVD+FV+T D   EPP++T NTVLS+LA+DYPV K++CYVSDD  S L F SL E ++FA+ WVPFCKK++++ RAP  YF
Sbjct:  314 LAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYF 396          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.757e-24
Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = 1
Query:  418 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            +LP +D+FVT+AD E EPP++T NT+LS+LA DYPV KLACY+SDD  + L+F +L E + FA+ WVPFC+K+ V+ R P  YF
Sbjct:  407 DLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYF 490          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.757e-24
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 1
Query:  421 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L E ++FA+ WVPFCKKY ++ RAP  YF
Sbjct:  352 LSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYCIEPRAPEWYF 434          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.175e-23
Identity = 46/84 (54.76%), Postives = 64/84 (76.19%), Query Frame = 1
Query:  418 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            +LP  D+FV+TAD E EPP++T NT+LS+LA +YPV KL+CYVSDD  + L F ++ EA+ FA +WVPFC+K+ ++ R P  YF
Sbjct:  377 DLPGFDVFVSTADPEKEPPLVTANTILSILAAEYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYF 460          

HSP 2 Score: 24.6386 bits (52), Expect = 1.175e-23
Identity = 12/38 (31.58%), Postives = 19/38 (50.00%), Query Frame = 2
Query:  185 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 298
            W ++ +CE  F   W+L    K  P+   T  Q L+E+
Sbjct:  326 WGMSVVCELWFALSWLLDQLPKLCPINRATDLQVLKEK 363          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 47/84 (55.95%), Postives = 67/84 (79.76%), Query Frame = 1
Query:  418 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            +LP +D+FV+TADAE EPP++T NT+LS+L+VDYPV KL+ Y+SDD  S + F ++ EA+ FAK+WVPFC+K+ ++ R P  YF
Sbjct:  202 DLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYF 285          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 1
Query:  406 NRIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            N   +LP +D+FV+TAD E EPP++T NT+LS+LA DYPV KL+CYVSDD  + L F ++ EA+ FA +WVPFC+K++++ R P  YF
Sbjct:  392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYF 479          
The following BLAST results are available for this feature:
BLAST of EY753528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLE1_ORYSJ2.438e-2454.12Cellulose synthase-like protein E1 OS=Oryza sativa... [more]
CSLD5_ARATH5.333e-2457.14Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLD3_ORYSJ5.335e-2457.14Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CESA2_ARATH5.720e-2461.45Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA7_ARATH7.471e-2460.24Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CSLD4_ORYSJ9.757e-2457.14Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CESA6_ARATH9.757e-2462.65Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CSLD2_ARATH1.175e-2354.76Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD6_ARATH1.274e-2355.95Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD2_ORYSJ1.274e-2354.55Cellulose synthase-like protein D2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-H07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753528 ID=EY753528; Name=EY753528; organism=Citrus sinensis; type=EST; length=883bp
AAAAAAAAATAACGAGTACTTGTTTTTCAAGCTCATGGCCAATACAAAGT
CGTCATGTCTCCCTCTATACGAAAAAGTTTTTCATAAAAACACATATCAT
AGGGCTTTAGATGTTATCATCTTGTTCCTTCTTCTATGTCTGCTCTTCTA
TCGGCTCTCAACGTTGAAGAATCATGGATTTGCTTGGTTTCTTGCTTTTC
TATGTGAGTCTTGTTTTACTTTCATCTGGATTCTCATCGTCAACTGCAAG
TGGACTCCTTTGACCTACAAAACATATCCCCAACGTCTCCAAGAAAGGTA
ACAAATCAAATAACGTTAGCATTAATAATTTCCGCATCATTTGCAATTGT
CTTTGTCATTTTGCAAGTTACTACACACACACACACACACACATGTGTAC
GACTCAACAGGATACAGGAGCTGCCCCCAGTGGACATGTTTGTGACAACT
GCTGATGCTGAACTCGAGCCGCCAATCATCACTGTAAACACAGTGCTGTC
TTTGTTGGCAGTTGATTATCCAGTTCACAAGCTCGCTTGCTATGTTTCTG
ATGATGCCTGCTCACCTCTCAATTTCTACTCTCTTGTTGAAGCTTCTAAA
TTCGCTAAGCTTTGGGTTCCATTCTGTAAAAAGTATAATGTTCAAATTAG
AGCTCCCTTTAGATACTTCCCAGATAGTGAGCCGTCCGATTCCAGTTCAG
GGGAACTCCTGCAAGACTGGAAAAACATGAGGGAGAATGACTGTTTTCTC
CATACAGAACGCTGAATATCCAACATAGTGAAGGTATATNCGAGACAAAG
AGGTCTCTCAGAGAGATCCCATTTAGTTACTATCAGAGAGAAAAGGCCAA
GCTCCCATACTACAACAGGGCCCTGATGATTGC
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