EY753516

Overview
NameEY753516
Unique NameEY753516
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9646 contig Csv1_Contig9646:19..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL5_EIMTE (60S ribosomal protein L5 OS=Eimeria tenella GN=RPL5 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 6.765e-76
Identity = 142/246 (57.72%), Postives = 181/246 (73.58%), Query Frame = 2
Query:   80 KAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEP-TENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLD----AEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAIRADP 802
            KAYFKR+QVKY+RRREGKTDY AR RLI QDKNKYN PKYRFVVR TN  +  Q++ A++ GD ++ SA + EL RYG++VGLTNY+AAY TGLLLARR+LK   +  E++G  + +GE+Y +E  +E RRPF+ +LDVG+V TT GNRVFGA+KG+ DGGL IPH  KRF GF+K     D     EVHR  IYG HVA YMRTL E++PE+YQ+ F  YI+   + D +E++Y +    IRA+P
Sbjct:   10 KAYFKRFQVKYRRRREGKTDYAARRRLILQDKNKYNAPKYRFVVRVTNSRVLCQVMYATLQGDRLVCSADSQELTRYGIKVGLTNYSAAYATGLLLARRLLKQKGLADEFKGLEKPSGEEYHIEEVSEERRPFKCVLDVGIVATTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGADDSYNPEVHRARIYGLHVAEYMRTLKEEDPERYQAQFSAYIRNKIDPDSIEKMYEEAFQKIRANP 255          
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL5_YEAST (60S ribosomal protein L5 OS=Saccharomyces cerevisiae GN=RPL5 PE=1 SV=3)

HSP 1 Score: 276.559 bits (706), Expect = 1.411e-73
Identity = 136/241 (56.43%), Postives = 174/241 (72.20%), Query Frame = 2
Query:   83 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAIRADP 802
            AY  R+Q  ++RRREGKTDY  R RL+ Q K KYNTPKYR VVRFTNKDI  QIIS++I GD+VLA+AY+HELPRYG+  GLTN+AAAY TGLL+ARR L+ L +D  Y+G  E  GE    E  E+  RPF+  LD+GL +TTTG RVFGALKG+ DGGL +PH E RF G+  +++++D E+ R YI+GGHV+ YM  L +D+ E++   F  Y+    +AD LE++Y   H AIRADP
Sbjct:   11 AYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADP 251          
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL5_DICDI (60S ribosomal protein L5 OS=Dictyostelium discoideum GN=rpl5 PE=1 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.406e-73
Identity = 131/242 (54.13%), Postives = 180/242 (74.38%), Query Frame = 2
Query:   80 KAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAIRADP 802
            KAY+ RYQV+++RRREGKTDY+ R RLI QDKNKYN+PKYR V R TN D+ AQ++ + I GD VL +AYAHELPR+G++VGLTNYA+ Y TGLLLARR+L  L++   Y+G  +  G+ + V+P +++ RPF+A LDVGL +T+TG +VF  LKG++DGG+ +PH E RFAG++ +SK+L+AE  R YI+G HVA+YM  L  ++ + Y+  F +YIK G     +E +Y   H AIRA+P
Sbjct:   10 KAYYSRYQVQFRRRREGKTDYQQRHRLITQDKNKYNSPKYRLVARITNTDVIAQVVYSKIVGDFVLCAAYAHELPRFGVKVGLTNYASCYATGLLLARRLLAKLKLADLYKGAEKVDGKVFLVKPVDDKPRPFKANLDVGLARTSTGAKVFAVLKGAVDGGIYVPHGETRFAGYNAESKKLNAETLRGYIFGKHVASYMTLLQTEDEDAYKKIFSQYIKNGVAPKDIETIYANAHKAIRANP 251          
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL5B_SCHPO (60S ribosomal protein L5-B OS=Schizosaccharomyces pombe GN=rpl5b PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 2.037e-72
Identity = 138/248 (55.65%), Postives = 177/248 (71.37%), Query Frame = 2
Query:   86 YFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAIRADPYRXNFEKN 826
            YF RYQ KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ +T QI+S+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L  + +  +YEG  E  GE    E  E+  RPF+  LDVGL +T+TG+RVFGA+KG+ DGGL IPH   RF GF  ++++LD E  RKYIYGGHVA YM  L++D+ E+YQ  F   I  G E+D LE++Y + +A IR DP   +F+K+
Sbjct:   12 YFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDP---SFQKS 256          
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL5A_SCHPO (60S ribosomal protein L5-A OS=Schizosaccharomyces pombe GN=rpl5a PE=1 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 2.037e-72
Identity = 138/248 (55.65%), Postives = 177/248 (71.37%), Query Frame = 2
Query:   86 YFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAIRADPYRXNFEKN 826
            YF RYQ KY+RRREGKTDY AR RLI Q KNKYN PKYR VVRF+N+ +T QI+S+ + GD VLA A++ ELPRYG++ GL N+ AAY TGLL+ARR L  + +  +YEG  E  GE    E  E+  RPF+  LDVGL +T+TG+RVFGA+KG+ DGGL IPH   RF GF  ++++LD E  RKYIYGGHVA YM  L++D+ E+YQ  F   I  G E+D LE++Y + +A IR DP   +F+K+
Sbjct:   12 YFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDP---SFQKS 256          
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL5_PIG (60S ribosomal protein L5 (Fragment) OS=Sus scrofa GN=RPL5 PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 3.172e-41
Identity = 81/115 (70.43%), Postives = 94/115 (81.74%), Query Frame = 2
Query:   80 KAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVE 424
            KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI  QI  A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    M   Y G VE
Sbjct:   10 KAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYGGQVE 124          
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_HYPBU (50S ribosomal protein L18P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.528e-27
Identity = 93/248 (37.50%), Postives = 124/248 (50.00%), Query Frame = 2
Query:   83 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAIRADPYRXNFEK 823
            A+  RY+V  +RRREGKT+Y  R  ++   K        RFVVR TN+ I  Q+I A   GD+ +A+A++ EL  +YG   G  N  AAY TGLL A R LK               G  Y+V            LD+GL + T G RVF ALKG+LD GL+IPH           S+++  E +R  I G H+A Y   L E  PE Y+  F  Y+ RG   + L + + +V   I  + YR   EK
Sbjct:    2 AHGPRYKVPRRRRREGKTNYYKRYVMVLSGKP-------RFVVRRTNQYIWVQVIIAKPQGDVTVAAAHSRELVKKYGWLGGTKNTPAAYLTGLLAALRALK--------------AGITYAV------------LDIGLHRPTRGARVFAALKGALDAGLEIPH-----------SEEVLPEEYR--IRGEHIAKYAAMLKEQNPELYEKRFSLYLARGLNPEDLPQHFEEVKNKI-LEEYREVLEK 202          
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_METS3 (50S ribosomal protein L18P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.207e-26
Identity = 81/216 (37.50%), Postives = 111/216 (51.39%), Query Frame = 2
Query:   98 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFE 745
            Y+V ++RRREGKTDY AR++L++ DK+       R VVR +N   T Q+I  +  GDI LASA + +L  YG   G +N +A Y TG L A+R L              A G D             A+LD+GL     G++VF ALKG++D GLDIP+ E      S+             I G HVA Y  +L +DE  K    F +Y++RG +
Sbjct:    7 YKVPFRRRREGKTDYAARMKLVDYDKS-------RLVVRLSNAHATVQVIDYAPEGDITLASAVSKQLANYGYLGGASNTSAVYLTGYLCAKRAL--------------AKGVD------------SAILDIGLKSAIKGSKVFAALKGAVDAGLDIPYGEAVLPDESR-------------INGEHVANYAESLDDDEIAKL---FSKYLERGLQ 173          
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_PYRAE (50S ribosomal protein L18P OS=Pyrobaculum aerophilum GN=rpl18p PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.385e-26
Identity = 80/232 (34.48%), Postives = 108/232 (46.55%), Query Frame = 2
Query:   95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAI 790
            RY+V ++RRREG T+YR R +L+   K        R VVR TNK I AQI+ A   GD+ +  A    L ++G      N AAAY  GL++  +                             RR   A+LD+GL +   G RVF  LKG+LD GL IPH E+      +             I G HVA Y   L E+ PE Y++ F  Y++RG E + L E + +V   I
Sbjct:    6 RYKVPFRRRREGLTNYRKRRKLLLSKKP-------RLVVRKTNKHIIAQIVVAKPQGDVTIVGADTRILAKFGWRGDENNVAAAYLLGLVVGYKA--------------------------RARRVEEAILDIGLHRPAPGARVFAVLKGALDAGLKIPHGEEVLPDEDR-------------IKGKHVAEYAEKLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191          
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_METTH (50S ribosomal protein L18P OS=Methanobacterium thermoautotrophicum GN=rpl18p PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.430e-25
Identity = 82/236 (34.75%), Postives = 117/236 (49.58%), Query Frame = 2
Query:   83 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAI 790
            A+  RY++ ++RRREGKTDYRAR +++        T K R VVR T   + AQII+  + GD  L SA++ +L + G   G +N AAAY TG L  +R LK        EG  E                  A+LD+GL     G++VF ALKG++D GL++PH E      S+             I G H+  Y  +L E+E  K    F +Y++RG     L E + ++   I
Sbjct:    2 AHGPRYKLAFRRRREGKTDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALK--------EGIEE------------------AVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGESVLPDESR-------------IRGEHIMEYAESLDEEELRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188          
The following BLAST results are available for this feature:
BLAST of EY753516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
RL5_EIMTE6.765e-7657.7260S ribosomal protein L5 OS=Eimeria tenella GN=RPL... [more]
RL5_YEAST1.411e-7356.4360S ribosomal protein L5 OS=Saccharomyces cerevisi... [more]
RL5_DICDI2.406e-7354.1360S ribosomal protein L5 OS=Dictyostelium discoide... [more]
RL5B_SCHPO2.037e-7255.6560S ribosomal protein L5-B OS=Schizosaccharomyces ... [more]
RL5A_SCHPO2.037e-7255.6560S ribosomal protein L5-A OS=Schizosaccharomyces ... [more]
RL5_PIG3.172e-4170.4360S ribosomal protein L5 (Fragment) OS=Sus scrofa ... [more]
RL18_HYPBU1.528e-2737.5050S ribosomal protein L18P OS=Hyperthermus butylic... [more]
RL18_METS32.207e-2637.5050S ribosomal protein L18P OS=Methanobrevibacter s... [more]
RL18_PYRAE8.385e-2634.4850S ribosomal protein L18P OS=Pyrobaculum aerophil... [more]
RL18_METTH1.430e-2534.7550S ribosomal protein L18P OS=Methanobacterium the... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-G04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753516 ID=EY753516; Name=EY753516; organism=Citrus sinensis; type=EST; length=911bp
GGCCGGNAATAAAGCCTCGACCCACGCGTCCGCTACACTTTGAGCTTCAG
CAATGGCCTTTGCCAACGCTCAAAAGTCAAAAGCTTACTTTAAGCGATAT
CAAGTTAAGTACAAGAGAAGGCGAGAGGGAAAGACTGACTATCGGGCTAG
GATTCGCCTGATCAACCAAGATAAAAACAAGTACAACACGCCAAAGTATC
GGTTTGTTGTGCGATTCACCAACAAAGACATCACTGCACAAATTATATCT
GCCAGCATAGCCGGGGATATAGTCCTTGCATCTGCTTATGCCCATGAGCT
TCCCCGTTATGGTCTTGAGGTGGGCCTCACTAATTATGCAGCAGCTTATT
GCACTGGACTCCTCTTGGCCCGCCGAGTCCTGAAAATGCTTGAGATGGAT
GCTGAGTATGAGGGGAACGTTGAGGCAACAGGAGAGGACTATTCAGTTGA
GCCAACTGAGAACAGGAGGCCTTTCCGTGCCCTGCTCGATGTTGGTCTTG
TGAAAACAACTACTGGTAACCGTGTCTTTGGCGCTCTTAAGGGTTCATTG
GATGGTGGACTTGATATCCCTCACAGNGAGAAGAGATTTGCTGGATTCAG
TAAGGATAGTAAGCAACTTGATGCTGAAGTTCACCGTAAATACATCTATG
GTGGTCATGTTGCTGCCTACATGAGGACTTTGATGGAAGATGAGCCAGAG
AAGTACCAGTCTCACTTTTGTGAATACATCAAGAGAGGTTTTGAGGCTGA
TTACCTTGAAGAGTTGTACAGGAAAGTACATGCTGCCATCCGGGCAGACC
CTTACCGAAANAATTTTGAAAAAAACCTCCACCCGAGCACAAGAGGTCCA
CCCTGAAAAACTTACCTTGAGGAAAGAAAGCCAGGTATTTGAAAGTTGAA
ACACTCATGCC
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