EY753516
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_METM5 (50S ribosomal protein L18P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl18p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.284e-23 Identity = 76/223 (34.08%), Postives = 113/223 (50.67%), Query Frame = 2 Query: 95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEE 763 +++V ++RRREGKTD+R R+ L+ K R V R + ++TAQ++S GD+VL SA+ EL + G + N AAY TGLLL ++ +K EG E A+LD GL + T G +F LKG+LD G+DIPH + ++ AE R + G HV Y +L ED + Y+ F +Y+++G + L E Sbjct: 6 KFRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNVTAQLMSYDEKGDVVLVSAHTKELVKMGYKGHCGNLPAAYLTGLLLGKKAVK--------EGAEE------------------AILDKGLHRATKGAAIFAVLKGALDAGMDIPHGD-----------EIIAEEER--LNGTHVKNYAESLKED-ADAYKKQFSKYLEKGLNPEDLPE 181
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_METM7 (50S ribosomal protein L18P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl18p PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.895e-23 Identity = 76/232 (32.76%), Postives = 119/232 (51.29%), Query Frame = 2 Query: 95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFE----ADYLEELYRKV 778 +++V ++RRREGKTD+R R+ L+ K R V R + ++ AQ+++ GD+VL SA++ EL + G + N AAY TGLLL ++ +K EG E A+LD GL + T G +F LKG+LD G+DIPH ++ A D ++L+ G HV Y +L ED + Y+ F +Y+++G +++EEL K+ Sbjct: 6 KFRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNVIAQLMAYDEKGDVVLVSAHSRELVKMGYKGHCGNLPAAYLTGLLLGKKAVK--------EGAEE------------------AILDKGLHRATKGAAIFAVLKGALDAGMDIPHGDEIIA----DEERLN---------GTHVKNYAESLKED-ADAYKKQFSKYLEKGLNPEDLPEHVEELKEKI 190
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_METM6 (50S ribosomal protein L18P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl18p PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.895e-23 Identity = 76/232 (32.76%), Postives = 119/232 (51.29%), Query Frame = 2 Query: 95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFE----ADYLEELYRKV 778 +++V ++RRREGKTD+R R+ L+ K R V R + ++ AQ+++ GD+VL SA++ EL + G + N AAY TGLLL ++ +K EG E A+LD GL + T G +F LKG+LD G+DIPH ++ A D ++L+ G HV Y +L ED + Y+ F +Y+++G +++EEL K+ Sbjct: 6 KFRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNVIAQLMAYDEKGDVVLVSAHSRELVKMGYKGHCGNLPAAYLTGLLLGKKAVK--------EGAEE------------------AILDKGLHRATKGAAIFAVLKGALDAGMDIPHGDEIIA----DEERLN---------GTHVKNYAESLKED-ADAYKKQFSKYLEKGLNPEDLPEHVEELKEKI 190
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_AERPE (50S ribosomal protein L18P OS=Aeropyrum pernix GN=rpl18p PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.087e-23 Identity = 79/233 (33.91%), Postives = 109/233 (46.78%), Query Frame = 2 Query: 95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAI 790 RY+V +RRREGKT+Y R RL+ K R VR +N+ + Q + A I GD V+A+A++ EL ++G + N AAY TG L R L+ + A+LDVGL K G+RVF ALKG+LD G++IPH E+ G D V + H+A + L E+ E YQ F Y+ RG + L +V AI Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLVKSGKP-------RMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTGYLAGLRALE--------------------------KGVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG--------DERVRCE-----HIAQWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAI 192
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_METVS (50S ribosomal protein L18P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl18p PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.133e-22 Identity = 77/232 (33.19%), Postives = 117/232 (50.43%), Query Frame = 2 Query: 95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAI 790 +++V ++RRREGKTD+R R+ L+ K R V R + +I AQ+++ GDIVL SA++ EL + G + N AAY TGLLL ++ ++ EG E A+LD GL + T G +F LKG+LD G+DIP E+ A D ++L+ G H+ Y L EDE E Y+ F +Y+++G + L E + ++ I Sbjct: 6 KHRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNIIAQLMAYDEKGDIVLVSAHSRELVKMGYKGHCGNLPAAYLTGLLLGKKAVE--------EGLEE------------------AILDKGLHRATKGAAIFAVLKGALDAGMDIPCGEEIIA----DEERLN---------GTHIKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 190
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_METVA (50S ribosomal protein L18P OS=Methanococcus vannielii GN=rpl18p PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.133e-22 Identity = 77/232 (33.19%), Postives = 117/232 (50.43%), Query Frame = 2 Query: 95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAI 790 +++V ++RRREGKTD+R R+ L+ K R V R + +I AQ+++ GDIVL SA++ EL + G + N AAY TGLLL ++ ++ EG E A+LD GL + T G +F LKG+LD G+DIP E+ A D ++L+ G H+ Y L EDE E Y+ F +Y+++G + L E + ++ I Sbjct: 8 KHRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNIIAQLMAYDEKGDIVLVSAHSRELVKMGYKGHCGNLPAAYLTGLLLGKKAVE--------EGLEE------------------AILDKGLHRATKGAAIFAVLKGALDAGMDIPCGEEIIA----DEERLN---------GTHIKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_STAMF (50S ribosomal protein L18P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.480e-22 Identity = 80/229 (34.93%), Postives = 110/229 (48.03%), Query Frame = 2 Query: 95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKV 778 RY+V +RRREGKT+Y R +++ RFVVR T K I QI++A GDI +A+A++ EL +YG GL N AAY TGLL A R LK G Y+V D+GL T G +VF A+K + D GL +P E+ + I G H+A++ + L E PE Y+ F +YI RGF+ L + +V Sbjct: 6 RYKVPKRRRREGKTNYYKRYKMVLSGHP-------RFVVRKTLKHIIVQIVTAKPEGDITIAAAHSRELYKKYGWMGGLGNTPAAYLTGLLAALRGLK--------------AGIKYAVP------------DIGLHVPTRGAKVFAAIKAANDVGLKVPVGEEVVPSDDR-------------IRGEHIASWAKMLQEASPEAYERFFSKYISRGFDPTQLPTHFEEV 188
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_METHJ (50S ribosomal protein L18P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl18p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.525e-22 Identity = 69/163 (42.33%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEK 583 RY V ++RRREG+T+Y AR RL+ K R VVR TN+ I QII+A + GD +A + EL ++G E L N AAY TG+LLA R LK A EG A+LD+GL + T G RVF ALKG+++ G DIPH E+ Sbjct: 6 RYFVAFRRRREGRTNYHARTRLVVATKP-------RMVVRKTNRHIICQIITAHMEGDRTHVAANSSELRKFGYEGSLNNTPAAYLTGMLLAVRALK-----AGQEG---------------------AILDIGLHRATPGARVFAALKGAVEAGFDIPHNEE 135
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_PYRCJ (50S ribosomal protein L18P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.625e-22 Identity = 72/232 (31.03%), Postives = 108/232 (46.55%), Query Frame = 2 Query: 95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAI 790 RY+V ++RRREG T+YR R +L+ K R VVR TNK + AQI+ A GD + L ++G + N +AAY GL++ Y+ + E A+LD+GL + T G RVF +KG +D G+++PH E + + I G HVA Y + L E+ PE Y++ F Y++RG + L + +V I Sbjct: 6 RYKVPFRRRREGVTNYRKRRKLLLSRKP-------RLVVRKTNKHLIAQIVIARPHGDETVVGLDTRVLSKFGWKGDENNTSAAYLLGLIVG------------YKARAKGIKE--------------AILDIGLHRPTPGARVFAVMKGVIDAGVEVPHGE-------------EVVPSEERIRGEHVAEYAKRLKEEAPEAYKARFSRYLQRGLPPEELPSHFEEVKKKI 191
BLAST of EY753516 vs. ExPASy Swiss-Prot
Match: RL18_NANEQ (50S ribosomal protein L18P OS=Nanoarchaeum equitans GN=rpl18p PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.625e-22 Identity = 74/236 (31.36%), Postives = 110/236 (46.61%), Query Frame = 2 Query: 83 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHXEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGFEADYLEELYRKVHAAI 790 A+ RY+V ++RRREGKT YR R++L+ K R VVR N +I AQ++ GD V+ + +++ L +YG + N +AY GL+ LK R A+LD+G K+T GN ++ LKG+LD GL+IPH E + I G H+A Y + L E+E E Y+ F Y+K G + + L + +V I Sbjct: 2 AHGPRYRVPFRRRREGKTVYRKRLKLLLSGKP-------RLVVRRFNSNILAQLVEYDPKGDRVIFTIHSNVLKKYGWKGHRGNLPSAYLVGLIAGYEALK--------------------------RGYKEAVLDIGRYKSTKGNALYAVLKGALDAGLNIPHSETILPSEDR-------------IRGEHIANYAKMLKENE-ELYKKQFSRYLKEGLDPEQLPNHFEEVKQKI 190 The following BLAST results are available for this feature:
BLAST of EY753516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753516 ID=EY753516; Name=EY753516; organism=Citrus sinensis; type=EST; length=911bpback to top |