EY753504

Overview
NameEY753504
Unique NameEY753504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_WOLSU (3-isopropylmalate dehydrogenase OS=Wolinella succinogenes GN=leuB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 3
Query:   51 LIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 290
            L G +GL PS +IG G  AL E +HGSAPDIAG+ +ANP A + S+  MLRH L   + AD I  AI+ T+ EG YRT D+
Sbjct:  253 LSGSIGLLPSASIG-GKAALYEPIHGSAPDIAGQGIANPIATIASASMMLRHSLGEVEAADAIDKAIVKTLKEG-YRTKDI 331          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_VIBCH (3-isopropylmalate dehydrogenase OS=Vibrio cholerae GN=leuB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 3
Query:   42 CAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADR-IQNAILSTIAEGKYRTADLGGS 299
            CA + G +G+ PS ++ E    L E   GSAPDIAGKN+ANP A +LS+  MLR+    + A R I+NA+   +A G+  TADL GS
Sbjct:  258 CAMITGSMGMLPSASMNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEAAARDIENAVSQALAAGEL-TADLAGS 343          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_SHIFL (3-isopropylmalate dehydrogenase OS=Shigella flexneri GN=leuB PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 3
Query:   42 CAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 314
            CA + G +G+ PS ++ E G  L E   GSAPDIAGKN+ANP A +LS   +LR+ L+  D A  I+ AI   + EG  RT DL  G ++ ++D
Sbjct:  257 CAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTGDLARGAAAVSTD 349          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_GLOVI (3-isopropylmalate dehydrogenase OS=Gloeobacter violaceus GN=leuB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 3
Query:   45 AGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADL 290
            A L G +G+ PS ++G GG  L E VHGSAPDIAG++ ANP A +LS   +LRH     +A +     + T+ E  YRT D+
Sbjct:  257 AMLTGSIGMLPSASLGSGGPGLYEPVHGSAPDIAGQDKANPLAQVLSGAMLLRHSLRQPEAAQAVERAVQTVLEQGYRTGDI 338          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_ECOUT (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=leuB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 3
Query:   42 CAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 314
            CA + G +G+ PS ++ E G  L E   GSAPDIAGKN+ANP A +LS   +LR+ L+  D A  I+ AI   + EG  RT DL  G ++ ++D
Sbjct:  258 CAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTGDLARGAAAVSTD 350          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_ECOL6 (3-isopropylmalate dehydrogenase OS=Escherichia coli O6 GN=leuB PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 3
Query:   42 CAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 314
            CA + G +G+ PS ++ E G  L E   GSAPDIAGKN+ANP A +LS   +LR+ L+  D A  I+ AI   + EG  RT DL  G ++ ++D
Sbjct:  257 CAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTGDLARGAAAVSTD 349          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_ECO57 (3-isopropylmalate dehydrogenase OS=Escherichia coli O157:H7 GN=leuB PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 3
Query:   42 CAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL--GGSSTTSD 314
            CA + G +G+ PS ++ E G  L E   GSAPDIAGKN+ANP A +LS   +LR+ L+  D A  I+ AI   + EG  RT DL  G ++ ++D
Sbjct:  257 CAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEG-IRTGDLARGAAAVSTD 349          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_BORA1 (3-isopropylmalate dehydrogenase OS=Bordetella avium (strain 197N) GN=leuB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 3
Query:   45 AGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 335
            A L G +G+ PS ++   G  L E  HGSAPDIAG+ +ANP A +LS+  +LR+ L    +ADRI+ A+   +A+G  RTAD+  + TT   T  + D
Sbjct:  255 AMLTGSIGMLPSASLNASGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNQPAQADRIEAAVRKVLAQG-LRTADIHEAGTTKVSTSQMGD 351          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH3_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 44/104 (42.31%), Postives = 57/104 (54.81%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIG-EGGIALAEAVHGSAPD--IAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 329
            +I    AG+ G  G+ P  N+G E  I    A  G+  +  +  +  ANP ALLLSS  MLRHL     ADR++ A+   I EGKYRT DLGG  TT +   A+
Sbjct:  260 LIANTAAGIAGGTGVMPGGNVGAEHAIFEQGASAGNVGNDKMVEQKKANPVALLLSSAMMLRHLRFPTFADRLETAVKQVIKEGKYRTKDLGGDCTTQEVVDAV 363          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.853e-12
Identity = 44/111 (39.64%), Postives = 60/111 (54.05%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNL------ANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 341
            ++    AG+ G  G+ P  N+G      A    G++    GK+       ANP ALLLSS  MLRHL+    ADR++ A+   IAEG  RT DLGG+STT +   A+  +L
Sbjct:  259 LVANTAAGIAGGTGVMPGGNVGA---EYAVFEQGASAGNVGKDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANL 366          
The following BLAST results are available for this feature:
BLAST of EY753504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
LEU3_WOLSU1.853e-1253.093-isopropylmalate dehydrogenase OS=Wolinella succi... [more]
LEU3_VIBCH1.853e-1247.133-isopropylmalate dehydrogenase OS=Vibrio cholerae... [more]
LEU3_SHIFL1.853e-1244.683-isopropylmalate dehydrogenase OS=Shigella flexne... [more]
LEU3_GLOVI1.853e-1245.123-isopropylmalate dehydrogenase OS=Gloeobacter vio... [more]
LEU3_ECOUT1.853e-1244.683-isopropylmalate dehydrogenase OS=Escherichia col... [more]
LEU3_ECOL61.853e-1244.683-isopropylmalate dehydrogenase OS=Escherichia col... [more]
LEU3_ECO571.853e-1244.683-isopropylmalate dehydrogenase OS=Escherichia col... [more]
LEU3_BORA11.853e-1242.863-isopropylmalate dehydrogenase OS=Bordetella aviu... [more]
IDH3_ARATH1.853e-1242.31Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
IDH2_ARATH1.853e-1239.64Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-F03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753504 ID=EY753504; Name=EY753504; organism=Citrus sinensis; type=EST; length=587bp
ATTAACAGCTCGACCCACGCGTCCGCATCATTATTTACCTATGTGCTGGG
TTGATTGGTCCATTGGGCTTAACACCTAGTTGCAATATTGGGGAAGGAGG
AATTGCCCTTGCTGAAGCTGTTCATGGTTCAGCACCTGATATTGCTGGAA
AGAATTTGGCAAATCCAACTGCTTTGCTGTTGAGTTCGGTAACAATGTTG
CGCCATTTGGAGCTCCATGACAAGGCTGATAGGATCCAAAATGCTATCCT
GAGCACAATTGCAGAGGGGAAGTATCGAACTGCAGATCTTGGTGGCTCTT
CAACGACATCAGATTTCACAAAGGCAATCTGCGATCATCTTTAAATATTT
CTTTCTACATAGAATTTGAATTCATGTTCAAGATTTACATTCTACCTTTC
TTTTTTTGAGCAATGTCTCAAATTTGTTTTTTCCCCCCCTTTTTAAAGTG
TTTTTCTTTGAGGGGAATGAGACCCATCACCTTGGTGACTATGTAGAAGT
TTTTTTCTGATGAAACTGTTCAGCCAGAGTGTATATGGCCGTCCTCNGAA
AAAAAAAAANNNTTAAAAAAAAAAAAAAAAAAAANGG
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