EY753504

Overview
NameEY753504
Unique NameEY753504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8225 contig Csv1_Contig8225:895..1480. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_STAAM (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   57 GPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 341
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_STAAB (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   57 GPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 341
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIENGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_STRR6 (3-isopropylmalate dehydrogenase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13
Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 3
Query:   51 LIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 341
            L G LG+ PS +  E G +L E +HGSAPDIAG+ +ANP +++LS V MLR     ++  +RI+ A+ +++A G   T D+GG ++T +  +AI   L
Sbjct:  249 LSGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVVMMLRDSFGRYEDTERIKRAVETSLAAG-ILTRDIGGQASTKEMMEAIIARL 345          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_BORPE (3-isopropylmalate dehydrogenase OS=Bordetella pertussis GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   45 AGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 335
            A L G +G+ PS ++   G  L E  HGSAPDIAG+ +ANP A +LS+  +LR+ L L  +ADR++ A+   +A+G  RTAD+  + TT   T  + D
Sbjct:  255 AMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADG-LRTADIHEAGTTKVSTSQMGD 351          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_BORPA (3-isopropylmalate dehydrogenase OS=Bordetella parapertussis GN=leuB PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   45 AGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 335
            A L G +G+ PS ++   G  L E  HGSAPDIAG+ +ANP A +LS+  +LR+ L L  +ADR++ A+   +A+G  RTAD+  + TT   T  + D
Sbjct:  255 AMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADG-LRTADIHEAGTTKVSTSQMGD 351          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_AQUAE (3-isopropylmalate dehydrogenase OS=Aquifex aeolicus GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   51 LIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKA-DRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 341
            ++G LG+ PS +IG+   AL E VHGSAPDIAGK +ANP A +LS+  ML++    DKA D I+ AI  T+ +G YRT D+         TK I D +
Sbjct:  257 VVGSLGMLPSASIGDR-YALYEPVHGSAPDIAGKGIANPIATILSAAMMLKYSFNMDKAHDLIEKAIEETLNQG-YRTPDIYSEGCIKVGTKEITDKI 352          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU32_BORBR (3-isopropylmalate dehydrogenase 2 OS=Bordetella bronchiseptica GN=leuB2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   45 AGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 335
            A L G +G+ PS ++   G  L E  HGSAPDIAG+ +ANP A +LS+  +LR+ L L  +ADR++ A+   +A+G  RTAD+  + TT   T  + D
Sbjct:  255 AMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADG-LRTADIHEAGTTKVSTSQMGD 351          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: TTUC_BACSU (Probable tartrate dehydrogenase/decarboxylase OS=Bacillus subtilis GN=ycsA PE=3 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 4.877e-13
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 341
            I+  + + L+G +G+ PS NI   G   ++ E VHGSAPDIAG+ LANP   + ++  ML H    +   +I + +    A+G  +T D+GG STT++ T  IC  L
Sbjct:  246 ILTDISSSLMGSIGIAPSANINPSGKYPSMFEPVHGSAPDIAGQGLANPIGQIWTAKLMLDHFGEEELGAKILDVMEQVTADG-IKTRDIGGQSTTAEVTDEICSRL 351          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_SYNY3 (3-isopropylmalate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.877e-13
Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 3
Query:   27 IIIYLCAGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 290
            I+  + A L G +G+ PS ++G  G  L E VHGSAPDIAG++ ANP A +LS+  MLR+ L+    ADR+++A+   + +G YRT D+
Sbjct:  251 ILSDIAAMLTGSIGMLPSASLGSDGPGLFEPVHGSAPDIAGQDKANPLAQVLSAAMMLRYGLDQPQAADRLEDAVKKVLEQG-YRTGDI 338          
BLAST of EY753504 vs. ExPASy Swiss-Prot
Match: LEU3_RALEJ (3-isopropylmalate dehydrogenase OS=Ralstonia eutropha (strain JMP134) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.877e-13
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   45 AGLIGPLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 290
            A L G +G+ PS ++      L E  HGSAPDIAGK +ANP A +LS+  MLR+ L   ++ADRI+NA+   +A+G YRT D+
Sbjct:  253 AMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYSLNKAEQADRIENAVKKVLAQG-YRTGDI 334          
The following BLAST results are available for this feature:
BLAST of EY753504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
LEU3_STAAM2.859e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAB2.859e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STRR63.734e-1341.843-isopropylmalate dehydrogenase OS=Streptococcus p... [more]
LEU3_BORPE3.734e-1342.863-isopropylmalate dehydrogenase OS=Bordetella pert... [more]
LEU3_BORPA3.734e-1342.863-isopropylmalate dehydrogenase OS=Bordetella para... [more]
LEU3_AQUAE3.734e-1346.943-isopropylmalate dehydrogenase OS=Aquifex aeolicu... [more]
LEU32_BORBR3.734e-1342.863-isopropylmalate dehydrogenase 2 OS=Bordetella br... [more]
TTUC_BACSU4.877e-1338.32Probable tartrate dehydrogenase/decarboxylase OS=B... [more]
LEU3_SYNY34.877e-1344.943-isopropylmalate dehydrogenase OS=Synechocystis s... [more]
LEU3_RALEJ4.877e-1348.193-isopropylmalate dehydrogenase OS=Ralstonia eutro... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-F03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753504 ID=EY753504; Name=EY753504; organism=Citrus sinensis; type=EST; length=587bp
ATTAACAGCTCGACCCACGCGTCCGCATCATTATTTACCTATGTGCTGGG
TTGATTGGTCCATTGGGCTTAACACCTAGTTGCAATATTGGGGAAGGAGG
AATTGCCCTTGCTGAAGCTGTTCATGGTTCAGCACCTGATATTGCTGGAA
AGAATTTGGCAAATCCAACTGCTTTGCTGTTGAGTTCGGTAACAATGTTG
CGCCATTTGGAGCTCCATGACAAGGCTGATAGGATCCAAAATGCTATCCT
GAGCACAATTGCAGAGGGGAAGTATCGAACTGCAGATCTTGGTGGCTCTT
CAACGACATCAGATTTCACAAAGGCAATCTGCGATCATCTTTAAATATTT
CTTTCTACATAGAATTTGAATTCATGTTCAAGATTTACATTCTACCTTTC
TTTTTTTGAGCAATGTCTCAAATTTGTTTTTTCCCCCCCTTTTTAAAGTG
TTTTTCTTTGAGGGGAATGAGACCCATCACCTTGGTGACTATGTAGAAGT
TTTTTTCTGATGAAACTGTTCAGCCAGAGTGTATATGGCCGTCCTCNGAA
AAAAAAAAANNNTTAAAAAAAAAAAAAAAAAAAANGG
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