EY753503

Overview
NameEY753503
Unique NameEY753503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.003e-53
Identity = 95/132 (71.97%), Postives = 110/132 (83.33%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*P 435
            TSIASNG RV CM+VWPP G KKFETLSYLPPL++E L KE+ YLIR GWIPCLEF LEKG+VYRE+H SP YYDGRYWTMW+LP+ G TD++QVLKE+ + + EYP SF+RIIGFDN+R VQC  FIA  P
Sbjct:   46 TSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.003e-53
Identity = 94/134 (70.15%), Postives = 111/134 (82.84%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441
            TS+ASNG RV+CM+VWPP  +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEF  E G+VYRE+H SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP +++RIIGFDN+R VQC  FIA  P G
Sbjct:   47 TSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.228e-53
Identity = 94/134 (70.15%), Postives = 111/134 (82.84%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441
            TSIASNG RV+CM+VWPP  +KK+ETLSYLP L+DE LLKE+ YL+++GW+PCLEF  E G+VYRE+H SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP +++RIIGFDN+R VQC  FIA  P G
Sbjct:   47 TSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.828e-53
Identity = 96/132 (72.73%), Postives = 107/132 (81.06%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*P 435
            TSIASNG RV+CM VWPP   KK+ETLSYLP LSDE LLKEI YL++ GW+PCLEF  E G+VYREHH SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP +++RIIGFDN+R VQC  FIA  P
Sbjct:   46 TSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.828e-53
Identity = 96/134 (71.64%), Postives = 109/134 (81.34%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441
            TSIASNG RV CM+VWPP  +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEF  E G+VYRE+H SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP ++VRIIGFDN+R VQC  FIA  P G
Sbjct:   46 TSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.828e-53
Identity = 96/134 (71.64%), Postives = 109/134 (81.34%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441
            TSIASNG RV CM+VWPP  +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEF  E G+VYRE+H SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP ++VRIIGFDN+R VQC  FIA  P G
Sbjct:   46 TSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS1_WHEAT (Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 6.828e-53
Identity = 96/140 (68.57%), Postives = 114/140 (81.43%), Query Frame = 1
Query:   25 RQQXSTSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPGC 444
            R + S    SNG R++CM+VWP  G+KKFETLSYLPPLS EAL K+++YLIRS W+PCLEF  + G+V+REH+ SP YYDGRYWTMWKLPM GCTDATQVL EV EV+KEYP ++VR+IGFDN+R VQC  FIA  PPGC
Sbjct:   30 RSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEF-SKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRPPGC 168          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52
Identity = 98/143 (68.53%), Postives = 109/143 (76.22%), Query Frame = 1
Query:   10 LDPRVRQQXSTSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438
            L  R      TSIASNG RVQCM+VWPP G KKFETLSYLP L D  L KE+ YL+R GWIPCLEF LE G+VYREH+ S  YYDGRYWTMWKLPM GCTDA+QVLKE+ E +  YP+ F+RIIGFDN+R VQC  FIA  PP
Sbjct:   34 LPTRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52
Identity = 96/132 (72.73%), Postives = 109/132 (82.58%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*P 435
            TSI SNG RV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEF LEKG+VYREH+ SP YYDGRYWTMWKLPM G TDA+QVLKE+ EV   YP +FVRIIGFDN+R VQC  FIA  P
Sbjct:   46 TSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52
Identity = 96/132 (72.73%), Postives = 109/132 (82.58%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*P 435
            TSI SNG RV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEF LEKG+VYREH+ SP YYDGRYWTMWKLPM G TDA+QVLKE+ EV   YP +FVRIIGFDN+R VQC  FIA  P
Sbjct:   46 TSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177          
The following BLAST results are available for this feature:
BLAST of EY753503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
RBS_MEDSA4.003e-5371.97Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS3_SOLTU4.003e-5370.15Ribulose bisphosphate carboxylase small chain 3, c... [more]
RBS1_SOLTU5.228e-5370.15Ribulose bisphosphate carboxylase small chain 1, c... [more]
RBS_CAPAN6.828e-5372.73Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS3B_SOLLC6.828e-5371.64Ribulose bisphosphate carboxylase small chain 3B, ... [more]
RBS3A_SOLLC6.828e-5371.64Ribulose bisphosphate carboxylase small chain 3A/3... [more]
RBS1_WHEAT6.828e-5368.57Ribulose bisphosphate carboxylase small chain PWS4... [more]
RBS4_SOYBN1.165e-5268.53Ribulose bisphosphate carboxylase small chain 4, c... [more]
RBS3_PEA1.165e-5272.73Ribulose bisphosphate carboxylase small chain 3A, ... [more]
RBS2_PEA1.165e-5272.73Ribulose bisphosphate carboxylase small chain 3C, ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-F01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753503 ID=EY753503; Name=EY753503; organism=Citrus sinensis; type=EST; length=820bp
AATTCACNGCTCGACCCACGCGTCCGCCAACAANGTAGTACTTCCATTGC
AAGCAACGGCCGAAGAGTCCAATGCATGAAGGTGTGGCCACCAACTGGCT
TGAAGAAGTTCGAGACTCTCTCATACCTCCCGCCACTGTCCGATGAAGCT
TTGCTCAAGGAAATCAATTACCTTATCCGCTCCGGCTGGATTCCCTGCTT
GGAATTCTAGTTGGAGAAAGGATGGGTGTACCGTGAGCACCACATGTCAC
CATGATACTACGATGGACGCTACTGGACAATGTGGAAGCTGCCCATGTNT
GGGTGCACAGATGCAACCCAGGTTTTGAAGGAGGTTGGGGAGGTCCAGAA
GGAATACCCACATTCATTCGTCCGAATTATCGGGTTTGACAACATGCGTT
TTGTGCAGTGCTTCATTTTCATTGCTGCCTAGCCTCCAGGCTGTTAGGTT
CCCAATTTAATCTGTGTNCCCCCCCATGTCTTTCTGTTGTTTTTTTTTTG
TGTTACCCCATATTGTTCTTTTTTCCTTGGGGTGTTCGGTTTCGGTTAAT
TTGGCCGCGGGCCGCCGGTGCTCGTGTTCATTCTTTCTCGTGTTCTTTCC
CGGGGCCCCCCCTCTCCCCCCTTTTTTTTTCTTTTTGTGGTTGTGTTATG
GGTCCTGTTAATACTTCAAAGGGGGGGGCTGTTTTTGTGGCTTTCGCTTT
CGCTTCCTCTTTCTTGTTCTCCCNCTGGCCGGTGGTTGACGCGCCCGTTT
GCTGTTTTCCTGGTTGCTTTCTTCCACCATTCTCTTCCGTCTATCCCCCG
GCGCCCCCGTTCGTTATGCG
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