EY753503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 4.426e-52 Identity = 95/134 (70.90%), Postives = 109/134 (81.34%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 TSIASNG RV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEF E G+VYRE++ SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP ++VRIIGFDN+R VQC FIA P G Sbjct: 46 TSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.426e-52 Identity = 92/134 (68.66%), Postives = 109/134 (81.34%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 TS+ASNG RV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEF E G+VYREH+ SP YYDGRYWTMWKLPM GCTD TQVL EV E + YP +++RIIGFDN+R VQC FIA P G Sbjct: 47 TSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_RAPSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.780e-52 Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438 TSIASNG RV CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EF LE G+VYREH +P YYDGRYWTMWKLP+ GCTD+ QVLKEV E +KEYP++ +RIIGFDN R VQC FIA PP Sbjct: 44 TSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.780e-52 Identity = 90/134 (67.16%), Postives = 112/134 (83.58%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 +++ SNG RVQCMKVWPP GLKK+ETLSYLPPL++ L KE++YL+R W+PCLEF LE G+VYRE+ SP YYDGRYWTMWKLPM GCTD+ QV+KE+ E +KEYP +++RIIGFDN+R VQC +FIA+ P G Sbjct: 44 STLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRPDG 177
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 7.549e-52 Identity = 95/133 (71.43%), Postives = 107/133 (80.45%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438 TSI SNG RV CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EF LE G+VYREH +P YYDGRYWTMWKLP+ GCTD+ QVLKEV E +KEYP +F+RIIGFDN R VQC FIA PP Sbjct: 44 TSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.859e-52 Identity = 93/134 (69.40%), Postives = 110/134 (82.09%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 TSIASNG RVQCM+VWPP KK+ETLSYLP LS+E LL+E+ YL+++GW+PCLEF E G+VYRE++ SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP +++RIIGFDN+R VQC FIA P G Sbjct: 47 TSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51 Identity = 97/144 (67.36%), Postives = 109/144 (75.69%), Query Frame = 1 Query: 16 PRVRQQXS--TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 P R+ S TSI SNG +VQCMKVWP G+KKFETLSYLPPL+ E L E+ YL+RSGWIPCLEF LE G VYREH P YYDGRYWTMWKLPM GCTDA QVLKE+ E+ K +P + RIIGFDN+R VQC F+A PPG Sbjct: 38 PTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51 Identity = 97/133 (72.93%), Postives = 106/133 (79.70%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438 TS+ASNG RVQCMKVWPP GL+KFETLSYLPPLS E+L K+I YLI GWIPCLEF LE +VYRE++ SP YYDGRYW MWKLPM GCTDATQVL E+ E K YP S +RIIGFDN R VQC FIA PP Sbjct: 48 TSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51 Identity = 91/132 (68.94%), Postives = 109/132 (82.58%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*P 435 TS+ASNG RVQCM+VWPP G+KKFETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEF G+VYREH +P YYDGRYWTMWKLPM GCTD +QV+ E+ E +K YP +F+RIIGFDN+R VQC FIA P Sbjct: 47 TSVASNGGRVQCMQVWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 178
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.682e-51 Identity = 94/133 (70.68%), Postives = 107/133 (80.45%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438 TSI SNG RV CMKVWPP G KKFETLSYLP L+D L KE++YL+R+ WIPC+EF LE G+VYREH +P YYDGRYWTMWKLP+ GCTD+ QVLKEV E +KEYP +F+RIIGFDN R VQC FIA PP Sbjct: 44 TSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176 The following BLAST results are available for this feature:
BLAST of EY753503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753503 ID=EY753503; Name=EY753503; organism=Citrus sinensis; type=EST; length=820bpback to top |