EY753503

Overview
NameEY753503
Unique NameEY753503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 4.426e-52
Identity = 95/134 (70.90%), Postives = 109/134 (81.34%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441
            TSIASNG RV CM+VWPP  +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEF  E G+VYRE++ SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP ++VRIIGFDN+R VQC  FIA  P G
Sbjct:   46 TSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.426e-52
Identity = 92/134 (68.66%), Postives = 109/134 (81.34%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441
            TS+ASNG RV+CM+VWPP  +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEF  E G+VYREH+ SP YYDGRYWTMWKLPM GCTD TQVL EV E +  YP +++RIIGFDN+R VQC  FIA  P G
Sbjct:   47 TSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_RAPSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.780e-52
Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438
            TSIASNG RV CMKVWPP G KKFETLSYLP LSD  L KE++YL+R+ WIPC+EF LE G+VYREH  +P YYDGRYWTMWKLP+ GCTD+ QVLKEV E +KEYP++ +RIIGFDN R VQC  FIA  PP
Sbjct:   44 TSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAYKPP 176          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.780e-52
Identity = 90/134 (67.16%), Postives = 112/134 (83.58%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441
            +++ SNG RVQCMKVWPP GLKK+ETLSYLPPL++  L KE++YL+R  W+PCLEF LE G+VYRE+  SP YYDGRYWTMWKLPM GCTD+ QV+KE+ E +KEYP +++RIIGFDN+R VQC +FIA+ P G
Sbjct:   44 STLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRPDG 177          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 7.549e-52
Identity = 95/133 (71.43%), Postives = 107/133 (80.45%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438
            TSI SNG RV CMKVWPP G KKFETLSYLP LSD  L KE++YL+R+ WIPC+EF LE G+VYREH  +P YYDGRYWTMWKLP+ GCTD+ QVLKEV E +KEYP +F+RIIGFDN R VQC  FIA  PP
Sbjct:   44 TSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 9.859e-52
Identity = 93/134 (69.40%), Postives = 110/134 (82.09%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441
            TSIASNG RVQCM+VWPP   KK+ETLSYLP LS+E LL+E+ YL+++GW+PCLEF  E G+VYRE++ SP YYDGRYWTMWKLPM GCTDATQVL EV E +K YP +++RIIGFDN+R VQC  FIA  P G
Sbjct:   47 TSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_MANES (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51
Identity = 97/144 (67.36%), Postives = 109/144 (75.69%), Query Frame = 1
Query:   16 PRVRQQXS--TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441
            P  R+  S  TSI SNG +VQCMKVWP  G+KKFETLSYLPPL+ E L  E+ YL+RSGWIPCLEF LE G VYREH   P YYDGRYWTMWKLPM GCTDA QVLKE+ E+ K +P  + RIIGFDN+R VQC  F+A  PPG
Sbjct:   38 PTTRKTNSDITSITSNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIKHHPDGYARIIGFDNVRQVQCISFLAYKPPG 181          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51
Identity = 97/133 (72.93%), Postives = 106/133 (79.70%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438
            TS+ASNG RVQCMKVWPP GL+KFETLSYLPPLS E+L K+I YLI  GWIPCLEF LE  +VYRE++ SP YYDGRYW MWKLPM GCTDATQVL E+ E  K YP S +RIIGFDN R VQC  FIA  PP
Sbjct:   48 TSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51
Identity = 91/132 (68.94%), Postives = 109/132 (82.58%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*P 435
            TS+ASNG RVQCM+VWPP G+KKFETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEF    G+VYREH  +P YYDGRYWTMWKLPM GCTD +QV+ E+ E +K YP +F+RIIGFDN+R VQC  FIA  P
Sbjct:   47 TSVASNGGRVQCMQVWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 178          
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.682e-51
Identity = 94/133 (70.68%), Postives = 107/133 (80.45%), Query Frame = 1
Query:   40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438
            TSI SNG RV CMKVWPP G KKFETLSYLP L+D  L KE++YL+R+ WIPC+EF LE G+VYREH  +P YYDGRYWTMWKLP+ GCTD+ QVLKEV E +KEYP +F+RIIGFDN R VQC  FIA  PP
Sbjct:   44 TSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176          
The following BLAST results are available for this feature:
BLAST of EY753503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
RBS2A_SOLLC4.426e-5270.90Ribulose bisphosphate carboxylase small chain 2A, ... [more]
RBS0_SOLTU4.426e-5268.66Ribulose bisphosphate carboxylase small chain C, c... [more]
RBS_RAPSA5.780e-5271.43Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_HELAN5.780e-5267.16Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS2B_ARATH7.549e-5271.43Ribulose bisphosphate carboxylase small chain 2B, ... [more]
RBS2_NICSY9.859e-5269.40Ribulose bisphosphate carboxylase small chain S41,... [more]
RBS_MANES1.288e-5167.36Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_FAGCR1.288e-5172.93Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS4_MESCR1.288e-5168.94Ribulose bisphosphate carboxylase small chain 4, c... [more]
RBS1B_ARATH1.682e-5170.68Ribulose bisphosphate carboxylase small chain 1B, ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-F01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753503 ID=EY753503; Name=EY753503; organism=Citrus sinensis; type=EST; length=820bp
AATTCACNGCTCGACCCACGCGTCCGCCAACAANGTAGTACTTCCATTGC
AAGCAACGGCCGAAGAGTCCAATGCATGAAGGTGTGGCCACCAACTGGCT
TGAAGAAGTTCGAGACTCTCTCATACCTCCCGCCACTGTCCGATGAAGCT
TTGCTCAAGGAAATCAATTACCTTATCCGCTCCGGCTGGATTCCCTGCTT
GGAATTCTAGTTGGAGAAAGGATGGGTGTACCGTGAGCACCACATGTCAC
CATGATACTACGATGGACGCTACTGGACAATGTGGAAGCTGCCCATGTNT
GGGTGCACAGATGCAACCCAGGTTTTGAAGGAGGTTGGGGAGGTCCAGAA
GGAATACCCACATTCATTCGTCCGAATTATCGGGTTTGACAACATGCGTT
TTGTGCAGTGCTTCATTTTCATTGCTGCCTAGCCTCCAGGCTGTTAGGTT
CCCAATTTAATCTGTGTNCCCCCCCATGTCTTTCTGTTGTTTTTTTTTTG
TGTTACCCCATATTGTTCTTTTTTCCTTGGGGTGTTCGGTTTCGGTTAAT
TTGGCCGCGGGCCGCCGGTGCTCGTGTTCATTCTTTCTCGTGTTCTTTCC
CGGGGCCCCCCCTCTCCCCCCTTTTTTTTTCTTTTTGTGGTTGTGTTATG
GGTCCTGTTAATACTTCAAAGGGGGGGGCTGTTTTTGTGGCTTTCGCTTT
CGCTTCCTCTTTCTTGTTCTCCCNCTGGCCGGTGGTTGACGCGCCCGTTT
GCTGTTTTCCTGGTTGCTTTCTTCCACCATTCTCTTCCGTCTATCCCCCG
GCGCCCCCGTTCGTTATGCG
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