EY753503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.859e-50 Identity = 96/145 (66.21%), Postives = 114/145 (78.62%), Query Frame = 1 Query: 16 PRVRQQXSTSIA--SNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPGC 444 P R+ ++S SNG R++CM+VWP G+KKFETLSYLPPL+ E LLK+I YL+RS W+PCLEF + G+VYRE+H SP YYDGRYWTMWKLPM GCTDATQVLKE+ E +K YP +FVRIIGFDN+R VQ FIA PPGC Sbjct: 26 PVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEF-SKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGC 169
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS1_BRANA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.859e-50 Identity = 92/133 (69.17%), Postives = 107/133 (80.45%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PP 438 TSI SNG RV CMKVWPP G KKFETLSYLP L++ L KE++YL+R+ WIPC+EF LE G+VYREH +P YYDGRYWTMWKLP+ GCTD+ QVLKEV E + EYP++F+RIIGFDN R VQC FIA PP Sbjct: 44 TSIVSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50 Identity = 92/132 (69.70%), Postives = 105/132 (79.55%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*P 435 TSIASNG RV+CM+VWPP +KK+ETLSYLP LS E LL EI YL+++GW+PCLEF E G+VYREH SP YYDGRYWTMWKLPM GCTDATQV EV E +K YP + +RIIGFDN+R VQC FIA P Sbjct: 46 TSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50 Identity = 93/132 (70.45%), Postives = 103/132 (78.03%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*P 435 TSIASNG RVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ GWIPC+EF LE +VYRE+H SP Y DGRYWTMWKLPM GCTD QVL EV E +K YP +F+RIIGFDN R VQC FIA P Sbjct: 49 TSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQVQCVSFIAYKP 180
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS2_ORYSJ (Ribulose bisphosphate carboxylase small chain A, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS-A PE=2 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 3.172e-50 Identity = 93/131 (70.99%), Postives = 108/131 (82.44%), Query Frame = 1 Query: 52 SNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPGC 444 SNG R++CM+VWP G+KKFETLSYLPPL+ E LLK+I YL+RS W+PCLEF + G+VYRE+H SP YYDGRYWTMWKLPM GCTDATQVLKE+ E +K YP +FVRIIGFDN+R VQ FIA PPGC Sbjct: 40 SNGGRIKCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEF-SKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGC 169
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS5_MESCR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-5 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.142e-50 Identity = 91/132 (68.94%), Postives = 108/132 (81.82%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*P 435 TS+ASNG RVQCM VWPP G+KKFETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEF G+VYREH +P YYDGRYWTMWKLPM GCTD +QV+ E+ E +K YP +F+RIIGFDN+R VQC FIA P Sbjct: 47 TSVASNGGRVQCM-VWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 177
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS_FLATR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Flaveria trinervia GN=RBCS PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.066e-50 Identity = 88/134 (65.67%), Postives = 110/134 (82.09%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 +++ SNG RVQCMKVWPP G KK+ETLSYLP L++ L KE++YL+R+ W+PCLEF LE G+VYRE+ SP YYDGRYWTMWKLPM GCTD+ QV+KE+ E +KEYP +++RIIGFDN+R VQC FIA+ P G Sbjct: 39 STLPSNGGRVQCMKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVSFIASKPTG 172
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS7_FLAPR (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Flaveria pringlei GN=RBCS7 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.066e-50 Identity = 88/134 (65.67%), Postives = 111/134 (82.84%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 +++ASNG RVQCMKVWPP G K++ETLSYLP L++ L KE++YL+R+ W+PCLEF LE G+VYRE+ SP YYDGRYWTMWKLPM GCTD+ QV+KE+ E +KEYP +++RIIGFDN+R VQC FIA+ P G Sbjct: 39 STLASNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS4_FLAPR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Flaveria pringlei GN=RBCS4 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.228e-50 Identity = 88/134 (65.67%), Postives = 110/134 (82.09%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 +++ SNG RVQCMKVWPP G KK+ETLSYLP L++ L KE++YL+R+ W+PCLEF LE G+VYRE+ SP YYDGRYWTMWKLPM GCTD+ QV+KE+ E +KEYP +++RIIGFDN+R VQC FIA+ P G Sbjct: 44 STLPSNGGRVQCMKVWPPLGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDG 177
BLAST of EY753503 vs. ExPASy Swiss-Prot
Match: RBS1_AMAHP (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS1 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.228e-50 Identity = 91/134 (67.91%), Postives = 103/134 (76.87%), Query Frame = 1 Query: 40 TSIASNGRRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF*LEKGWVYREHHMSP*YYDGRYWTMWKLPMXGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNMRFVQCFIFIAA*PPG 441 +S+ SNG RVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ GWIPC+EF LE +VYRE+H SP Y DGRYWTMWKLPM GCTD QVL EV E +K YP +F+RIIGFDN R VQC FIA P G Sbjct: 48 SSLPSNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAYKPAG 181 The following BLAST results are available for this feature:
BLAST of EY753503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753503 ID=EY753503; Name=EY753503; organism=Citrus sinensis; type=EST; length=820bpback to top |