EY753491

Overview
NameEY753491
Unique NameEY753491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.357e-26
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 1
Query:  127 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            P   A+TCGQVTA LAPC+P+L   GR P   CC GV++L G+A+TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPSTDCS V+
Sbjct:   20 PHAEALTCGQVTAGLAPCLPYL--QGRGPLGGCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.772e-26
Identity = 59/97 (60.82%), Postives = 69/97 (71.13%), Query Frame = 1
Query:  127 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            P   A+TCGQVTA LAPC+P+L   GR P   CC GV+ L G+A+TT DR+ AC CLK A   I+GI  N AAG+PS C V IPYKISPSTDCS V+
Sbjct:   20 PHAEALTCGQVTAGLAPCLPYL--QGRGPLGGCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.157e-26
Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            A+TCGQV++++ PC+ +    G  P   CCSGVRSLN AARTT DR+AACNCLK A   IRG+    AA +PS+CGV IPY IS STDCSRV
Sbjct:   30 AVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.796e-26
Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            AI+CG VT+ L+PC+ +L TGG  P P CC GV+ L  AA TTPDRQAACNCLK A G+I  +  N AA LP +CGV IPYKIS ST+C+ V+
Sbjct:   18 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.149e-25
Identity = 56/92 (60.87%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            AI+CGQV +++APCI +    G  P   CCSGVRSLN AARTT DR+AACNCLK A   + G+    AA +PS+CGV IPY IS STDCSRV
Sbjct:   28 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.149e-25
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLI-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            A+T GQVT SLAPCI +L  +G    PP CC+G++SLN AA+TTP RQAAC C+K A   I GI   +A+GLP +CGV IPYKISPSTDC+ V+
Sbjct:   27 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.149e-25
Identity = 54/93 (58.06%), Postives = 69/93 (74.19%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            AI+CG V+ +L PC+ +L  GG  P P CC GV+ LNGAARTT DR+AACNCLK + G+I G+KP   A LP +CGVR+PY IS ST+C+ +R
Sbjct:   26 AISCGTVSGALVPCLTYL-KGGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.149e-25
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLI-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            A+T GQVT SLAPCI +L  +G    PP CC+G++SLN AA+TTP RQAAC C+K A   I GI   +A+GLP +CGV IPYKISPSTDC+ V+
Sbjct:   23 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.500e-25
Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            AI+CG VT+ L+PC+ +L TGG  P P CC GV+ L  AA TTPDRQAACNCLK A G+I  +  N AA LP +CGV IPYKIS ST+C+ V+
Sbjct:   26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.500e-25
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 1
Query:  127 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            P  +A+TCGQV + LAPCI +       P   CC GVR+LN AA TT DRQ  C CLK+    + G++P++ AG+PS+CGV IPY ISPSTDCSRV
Sbjct:   23 PAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118          
The following BLAST results are available for this feature:
BLAST of EY753491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP1_SOLLC1.357e-2660.82Non-specific lipid-transfer protein 1 OS=Solanum l... [more]
NLTP1_SOLPN1.772e-2660.82Non-specific lipid-transfer protein 1 OS=Solanum p... [more]
NLTP2_SORBI5.157e-2660.87Non-specific lipid-transfer protein 2 OS=Sorghum b... [more]
NLTP4_LENCU8.796e-2660.22Non-specific lipid-transfer protein 4 (Fragment) O... [more]
NLTP_MAIZE1.149e-2560.87Non-specific lipid-transfer protein OS=Zea mays PE... [more]
NLTP2_GOSHI1.149e-2560.64Non-specific lipid-transfer protein OS=Gossypium h... [more]
NLTP1_LENCU1.149e-2558.06Non-specific lipid-transfer protein 1 OS=Lens culi... [more]
NLTP1_GOSHI1.149e-2560.64Non-specific lipid-transfer protein OS=Gossypium h... [more]
NLTP6_LENCU1.500e-2560.22Non-specific lipid-transfer protein 6 OS=Lens culi... [more]
NLTP4_ORYSJ1.500e-2555.21Non-specific lipid-transfer protein 4 OS=Oryza sat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-D11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753491 ID=EY753491; Name=EY753491; organism=Citrus sinensis; type=EST; length=944bp
AATTCCAAATCCGACCCACGCGTCCGCTGATAACTAGTTATAACCAAGCA
AAAGCCTCCCTGACGAATCCTCATGGCTGCTCTTAAGCTTGTTTGTGCTT
TGCTTTTGTGCATTCTGGTGACTGCCCCGGTGACTAATGCCATAACATGC
GGGCAGGTGACAGCCTCCTTGGCTCCATGCATCCCTTTCTTGATAACTGG
AGGGCGTTTTCCTCCACCGCCATGCTGTAGCGGCGTCAGGTCTCTCAACG
GCGCCGCCAGAACCACCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAA
CGAGCTTACGGAACAATCCGCGGCATCAAACCTAATGTTGCCGCTGGCCT
TCCTAGTCAATGTGGAGTCAGAATTCCTTACAAGATCAGCCCCAGCACCG
ACTGCTCTAGGGTCAGGTGAAGTTGAGTTTGAGCTCTGTGACTTTCCAAG
TATGATTGACTGAGAAGAATAAATAAATAAAGAATATCTATGTTAATTTC
TTTGTCCGAACGAGTCTCCACTTGTATGAGTTTCACTCTCATGTCATGTT
TGTATATTTGCTTTTTATGTCATATTAAATATGTAAACGCGATCTGTGTT
TTGAGTGATTAATTATAGTTATTTTGTGGTATTATCTTAAAAAAAAAAAA
AAAAAAAAAAAAAAGNGGGGGCCGGCCNCTCTTTTGTTTTCTTTTTTCCC
TTCCCTTGTCTGCTTTTTTTTNCTTTTTCTTTGCGGCCCCTCTTTTTTCT
TATGGCTCCTGCGTTACNCGTTTTTTTTGGGGAAACCTGGCGTTCCCCAA
TAAATGGCCTGGGGCACCCCCCTTTTCCCCGTTGGCTTTCTCCCGTTAGG
CCCCTTCTTTTTCCTTTCCTCCTTTGCCTTCCTGATGGCGCTGGGTCCCC
CCTTTGCGCTTTTTAACCTGGTGAGTGGTGTTTACCACACAAAA
back to top