EY753491

Overview
NameEY753491
Unique NameEY753491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753491_ssr468 microsatellite EY753491_ssr468:468..479. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.696e-24
Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            AI+CGQV ++++PC+ +   GG  P   CCSGVRSLN AA TT DR+ ACNCLK   G+I G+    AA +PS+CGV IPY ISPS DCS V
Sbjct:   27 AISCGQVNSAVSPCLSYA-RGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.696e-24
Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            AI+CGQV ++++PC+ +   GG  P   CCSGVRSLN AA TT DR+ ACNCLK   G+I G+    AA +PS+CGV IPY ISPS DCS V
Sbjct:   26 AISCGQVNSAVSPCLSYA-RGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.696e-24
Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            AI+CGQV ++++PC+ +   GG  P   CCSGVRSLN AA TT DR+ ACNCLK   G+I G+    AA +PS+CGV IPY ISPS DCS V
Sbjct:   27 AISCGQVNSAVSPCLSYA-RGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.827e-24
Identity = 54/92 (58.70%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            AI+CGQV++++A C+ +    G  P   CCSGVRSLN AARTT DR+AACNCLK A   I G+    AA +PS+CGV +PY IS STDCSRV
Sbjct:   26 AISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.304e-24
Identity = 50/96 (52.08%), Postives = 68/96 (70.83%), Query Frame = 1
Query:  130 VTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            V  AI+CG V  SLAPC  +L  GG   PP CC+GV++LN  A+TTPDRQ AC C++    +I G+ P++A+GLP +CGV IPY IS ST+C+ ++
Sbjct:   21 VDAAISCGTVAGSLAPCATYLSKGG-LVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.075e-23
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  142 ITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            +TCGQV  +LA CI FL  GG   PP CC+GV+++  ++RTT DR+A C+CLK A G +RGI PN A  LP +CGV IPYKIS ST+C+ +
Sbjct:    1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.086e-23
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            AI+CGQV+++L+PCI +    G  PP  CCSGV+ L GAA++T D+QAAC C+K A G   G+    AAG+PS CGV +PY IS S DCS++R
Sbjct:   26 AISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.337e-23
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            AITCGQV +++ PC+ +   GG  P   CCSGVRSL  AA TT DR+ ACNCLK A   I+G+    AA +PS+CGV +PY IS S DCSRV
Sbjct:   25 AITCGQVNSAVGPCLTYA-RGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.337e-23
Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            AITCGQV +++ PC+ +   GG  P   CCSGVRSL  AA TT DR+ ACNCLK A   I+G+    AA +PS+CGV +PY IS S DCSRV
Sbjct:   25 AITCGQVNSAVGPCLTYA-RGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.337e-23
Identity = 50/93 (53.76%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            AI+CGQV+++L+PCI +    G  PP  CCSGV+ L GAA++T D+QAAC C+K A G   G+    AAG+PS CGV +PY IS S DCS++R
Sbjct:   26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115          
The following BLAST results are available for this feature:
BLAST of EY753491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTP2_ORYSI3.696e-2457.61Non-specific lipid-transfer protein 2 OS=Oryza sat... [more]
NLT2B_ORYSJ3.696e-2457.61Non-specific lipid-transfer protein 2B OS=Oryza sa... [more]
NLT2A_ORYSJ3.696e-2457.61Non-specific lipid-transfer protein 2A OS=Oryza sa... [more]
NLTP1_SORBI4.827e-2458.70Non-specific lipid-transfer protein 1 OS=Sorghum b... [more]
NLTP3_ARATH6.304e-2452.08Non-specific lipid-transfer protein 3 OS=Arabidops... [more]
NLTP1_PHAAU1.075e-2356.04Non-specific lipid-transfer protein 1 OS=Phaseolus... [more]
NLT41_HORVU4.086e-2353.76Non-specific lipid-transfer protein 4.1 OS=Hordeum... [more]
NLTP1_ORYSJ5.337e-2356.52Non-specific lipid-transfer protein 1 OS=Oryza sat... [more]
NLTP1_ORYSI5.337e-2356.52Non-specific lipid-transfer protein 1 OS=Oryza sat... [more]
NLT43_HORVU5.337e-2353.76Non-specific lipid-transfer protein 4.3 OS=Hordeum... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-D11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753491 ID=EY753491; Name=EY753491; organism=Citrus sinensis; type=EST; length=944bp
AATTCCAAATCCGACCCACGCGTCCGCTGATAACTAGTTATAACCAAGCA
AAAGCCTCCCTGACGAATCCTCATGGCTGCTCTTAAGCTTGTTTGTGCTT
TGCTTTTGTGCATTCTGGTGACTGCCCCGGTGACTAATGCCATAACATGC
GGGCAGGTGACAGCCTCCTTGGCTCCATGCATCCCTTTCTTGATAACTGG
AGGGCGTTTTCCTCCACCGCCATGCTGTAGCGGCGTCAGGTCTCTCAACG
GCGCCGCCAGAACCACCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAA
CGAGCTTACGGAACAATCCGCGGCATCAAACCTAATGTTGCCGCTGGCCT
TCCTAGTCAATGTGGAGTCAGAATTCCTTACAAGATCAGCCCCAGCACCG
ACTGCTCTAGGGTCAGGTGAAGTTGAGTTTGAGCTCTGTGACTTTCCAAG
TATGATTGACTGAGAAGAATAAATAAATAAAGAATATCTATGTTAATTTC
TTTGTCCGAACGAGTCTCCACTTGTATGAGTTTCACTCTCATGTCATGTT
TGTATATTTGCTTTTTATGTCATATTAAATATGTAAACGCGATCTGTGTT
TTGAGTGATTAATTATAGTTATTTTGTGGTATTATCTTAAAAAAAAAAAA
AAAAAAAAAAAAAAGNGGGGGCCGGCCNCTCTTTTGTTTTCTTTTTTCCC
TTCCCTTGTCTGCTTTTTTTTNCTTTTTCTTTGCGGCCCCTCTTTTTTCT
TATGGCTCCTGCGTTACNCGTTTTTTTTGGGGAAACCTGGCGTTCCCCAA
TAAATGGCCTGGGGCACCCCCCTTTTCCCCGTTGGCTTTCTCCCGTTAGG
CCCCTTCTTTTTCCTTTCCTCCTTTGCCTTCCTGATGGCGCTGGGTCCCC
CCTTTGCGCTTTTTAACCTGGTGAGTGGTGTTTACCACACAAAA
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