EY753491

Overview
NameEY753491
Unique NameEY753491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753491_ssr468 microsatellite EY753491_ssr468:468..479. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.172e-16
Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR--GIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            AI+C  V A+L PC+ +++ GG  P   CC+G+R L+  A +  D+Q  C C+K   G +    I    AA LP +CGV++PYKI PST+C+ ++
Sbjct:   23 AISCNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.704e-16
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 1
Query:  136 NAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            +AI+C  V   L PC+ +L +G   PP  CC GV+SL  A  T+ D++AAC C+K    ++  +KP +A  L S CG  +P   SP+ DC+ V
Sbjct:   24 SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVT-VKPELAQALASNCGASLPVDASPTVDCTTV 115          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.704e-16
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGG-RFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTI-RGIKPNVAAGLPSQCGVRIPY--KISPSTDCS 408
            A++CG+V ++L PC  +L  GG   P P CC+GVR LNG   TT DR+ AC C+K A   +  G+  + AAG+P +CG++IPY  +I  +T C+
Sbjct:   26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.319e-16
Identity = 49/96 (51.04%), Postives = 58/96 (60.42%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 417
            AI+CG VT SL  C  +L  GG F P  CCSGV+ LN  ARTT DRQ AC C++   RA G+   +    AA LP  C VRI Y IS  T+C+ VR
Sbjct:   26 AISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS--RLNAGRAARLPGACRVRISYPISARTNCNTVR 118          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.408e-15
Identity = 42/97 (43.30%), Postives = 54/97 (55.67%), Query Frame = 1
Query:  127 PVTNAITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVR-IPYKISPSTDCSRV 414
            PV  AI+C QV +++ PC  +LI     P   CC  +R L+   + TPDRQA CNCLK       G+K   AA LP  C V  +   ISP+ DCS+V
Sbjct:   27 PVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLK-TQAKSYGVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.408e-15
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 1
Query:  139 AITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV---AAGLPSQCGVRIPYKISPSTDCSRVR 417
            A++C  V A L PC+ ++  GG  P   CC+G+ +L   A+T+ DRQ  C C+K A G +  + P     A  LPS+CGV +PYK SPSTDC  ++
Sbjct:   20 AVSCNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLT-LSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113          
BLAST of EY753491 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13
Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 1
Query:  142 ITCGQVTASLAPCIPFLITGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 414
            + CGQV  +L+ C+PFL      P   CC+GV  L   A T  D++ AC C+K A      I+ + A+ LP +CGV I   IS +T+C  +
Sbjct:    1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91          
The following BLAST results are available for this feature:
BLAST of EY753491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
NLTPA_ARATH2.172e-1641.05Non-specific lipid-transfer protein 10 OS=Arabidop... [more]
NLTP8_ARATH3.704e-1640.86Non-specific lipid-transfer protein 8 OS=Arabidops... [more]
NLTP7_ARATH3.704e-1644.68Non-specific lipid-transfer protein 7 OS=Arabidops... [more]
NLTP5_ARATH6.319e-1651.04Non-specific lipid-transfer protein 5 OS=Arabidops... [more]
NLTP_PINTA1.408e-1543.30Non-specific lipid-transfer protein OS=Pinus taeda... [more]
NLTP6_ARATH1.408e-1542.71Non-specific lipid-transfer protein 6 OS=Arabidops... [more]
NLTPB_RICCO8.540e-1338.46Non-specific lipid-transfer protein B OS=Ricinus c... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-D11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753491 ID=EY753491; Name=EY753491; organism=Citrus sinensis; type=EST; length=944bp
AATTCCAAATCCGACCCACGCGTCCGCTGATAACTAGTTATAACCAAGCA
AAAGCCTCCCTGACGAATCCTCATGGCTGCTCTTAAGCTTGTTTGTGCTT
TGCTTTTGTGCATTCTGGTGACTGCCCCGGTGACTAATGCCATAACATGC
GGGCAGGTGACAGCCTCCTTGGCTCCATGCATCCCTTTCTTGATAACTGG
AGGGCGTTTTCCTCCACCGCCATGCTGTAGCGGCGTCAGGTCTCTCAACG
GCGCCGCCAGAACCACCCCTGACCGCCAAGCTGCATGCAACTGCTTGAAA
CGAGCTTACGGAACAATCCGCGGCATCAAACCTAATGTTGCCGCTGGCCT
TCCTAGTCAATGTGGAGTCAGAATTCCTTACAAGATCAGCCCCAGCACCG
ACTGCTCTAGGGTCAGGTGAAGTTGAGTTTGAGCTCTGTGACTTTCCAAG
TATGATTGACTGAGAAGAATAAATAAATAAAGAATATCTATGTTAATTTC
TTTGTCCGAACGAGTCTCCACTTGTATGAGTTTCACTCTCATGTCATGTT
TGTATATTTGCTTTTTATGTCATATTAAATATGTAAACGCGATCTGTGTT
TTGAGTGATTAATTATAGTTATTTTGTGGTATTATCTTAAAAAAAAAAAA
AAAAAAAAAAAAAAGNGGGGGCCGGCCNCTCTTTTGTTTTCTTTTTTCCC
TTCCCTTGTCTGCTTTTTTTTNCTTTTTCTTTGCGGCCCCTCTTTTTTCT
TATGGCTCCTGCGTTACNCGTTTTTTTTGGGGAAACCTGGCGTTCCCCAA
TAAATGGCCTGGGGCACCCCCCTTTTCCCCGTTGGCTTTCTCCCGTTAGG
CCCCTTCTTTTTCCTTTCCTCCTTTGCCTTCCTGATGGCGCTGGGTCCCC
CCTTTGCGCTTTTTAACCTGGTGAGTGGTGTTTACCACACAAAA
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