EY753482

Overview
NameEY753482
Unique NameEY753482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753482 vs. ExPASy Swiss-Prot
Match: CBP1_CAEEL (Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 PE=2 SV=5)

HSP 1 Score: 183.726 bits (465), Expect = 1.231e-45
Identity = 86/184 (46.74%), Postives = 117/184 (63.59%), Query Frame = 2
Query:   20 TRPVLWFXKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEIKAVTGEALRTFVYHEILIGYLEYCKLRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAARENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQIRQDEDGKK 571
            T+ V  F  I+GVEVC FG++VQE+GS C  PN RRVY++YLDSV +F+P         LRT VYHE+L+GYL+Y K+ G+T  +IWACPP +G+DYI +CHP  QK PK  +L++WY  ML K  +E  VV+  ++Y              T  +LPYF+GD+WP   ED I +   +E  +K
Sbjct: 1184 TKAVFAFEIIDGVEVCFFGLHVQEYGSACPAPNARRVYIAYLDSVHFFQPR-------ELRTDVYHELLLGYLDYAKMLGYTMAHIWACPPSEGDDYIFHCHPPEQKIPKPKRLQDWYKKMLEKGVQEGSVVEFKDIY-----KQARDDNLTTPTQLPYFEGDFWPNVIEDCIREASNEEAQRK 1355          
BLAST of EY753482 vs. ExPASy Swiss-Prot
Match: CBP_MOUSE (CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.138e-41
Identity = 100/257 (38.91%), Postives = 137/257 (53.31%), Query Frame = 2
Query:   20 TRPVLWFXKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEIKAVTGEALRTFVYHEILIGYLEYCKLRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAARENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQIRQDEDGKKQ------------NKGITKKTITKRALKASGQTDLSGYASKDLL--------LMHKLGETICPMKEDFIMVHL 730
            T+ +  F +I+GV+VC FGM+VQ+         Q  VY+SYLDS+ +FRP         LRT VYHEILIGYLEY K   + + +IWACPP +G+DYI +CHP  QK PK  +L+EWY  ML KA  E I+ D    Y   F    E R   +A  LPYF+GD+WP   E+ I ++ Q+E+ +K+            ++G +K    K   K +        A+K           L  KL  T+   KE F ++HL
Sbjct: 1394 TKALFAFEEIDGVDVCFFGMHVQDTALIAPHQIQGCVYISYLDSIHFFRPR-------CLRTAVYHEILIGYLEYVKKLVYVTAHIWACPPSEGDDYIFHCHPPDQKIPKPKRLQEWYKKMLDKAFAERIIND----YKDIFKQANEDRL-TSAKELPYFEGDFWPNVLEESIKELEQEEEERKKEESTAASETPEGSQGDSKNAKKKNNKKTNKNKSSISRANKKKPSMPNVSNDLSQKLYATMEKHKEVFFVIHL 1638          
The following BLAST results are available for this feature:
BLAST of EY753482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CBP1_CAEEL1.231e-4546.74Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 P... [more]
CBP_MOUSE3.138e-4138.91CREB-binding protein OS=Mus musculus GN=Crebbp PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-C12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753482 ID=EY753482; Name=EY753482; organism=Citrus sinensis; type=EST; length=905bp
GGNATTACAAGCTCGACCCACGCGTCCGGTTTTGTGGTTTCANAAGATTG
AAGGTGTAGAAGTCTGCCTATTTGGCATGTATGTTCAAGAATTTGGATCC
GAATGCCAATTTCCTAATCAGCGTCGAGTTTATCTATCATATTTGGATTC
GGTGAAGTATTTTAGGCCTGAGATTAAAGCAGTTACTGGAGAGGCACTGC
GCACATTTGTTTATCATGAAATTTTGATTGGTTACCTTGAATATTGCAAG
CTGCGTGGTTTTACCAGCTGCTATATTTGGGCTTGCCCTCCGCTAAAGGG
TGAAGACTATATTTTGTATTGCCATCCAGAAATTCAGAAAACACCAAAAT
CTGATAAACTCCGAGAATGGTACTTGGCTATGTTAAGAAAAGCTGCCAGG
GAAAACATCGTAGTTGATCTCACTAATTTATATGATCATTTCTTTGTATC
CACCGGTGAATGTAGAGCTAAGGTAACTGCAGCCAGGCTGCCATATTTTG
ATGGTGACTATTGGCCTGGTGCTGCAGAGGATCTAATTTACCAGATTCGT
CAAGATGAAGACGGGAAAAAACAGAATAAGGGGATAACCAAAAAAACCAT
TACAAAAAGGGCTCTAAAAGCATCTGGTCAAACTGATCTTTCTGGGTACG
CGTCAAAGGATCTGCTACTTATGCATAAGCTTGGGGAGACCATTTGCCCT
ATGAAGGAAGACTTTATTATGGTTCATCTGCAGCATGCTTGCAATCATTG
TTGTATTTTAATGGTATCGGGGAGTCGGCATGTGTGCGAACAGTGCACAA
AGCTGACCAAAAACNTTCANCTTTGTGATAAGTGTTTTGAAGCACAAAAG
AACGTGAAGATAGAGAGAGACTTCCGTCCATTCGAGGGAGTTCCCTTCTT
GAGGA
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