EY753476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.991e-16 Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 282 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA--GELEFFPDPT------TLFIVEKIFIGWAEGKR 584 WFPG P LDGS PGDFGFDPLGL + PE +SEI HCRWAML G+ +PE L + W G+ + +P T+ +E + I +AE +R Sbjct: 48 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR 156
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15 Identity = 43/109 (39.45%), Postives = 56/109 (51.38%), Query Frame = 3 Query: 282 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSW--YTAGELEFFPDPT------TLFIVEKIFIGWAEGKR 584 W PG P +LDGS PGDFGFD LGLG P L +SE++HCRWAML GI +PE L + W G+ + P T+ +E + I + E +R Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR 157
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.072e-15 Identity = 56/168 (33.33%), Postives = 83/168 (49.40%), Query Frame = 3 Query: 225 AGTRSVSVSAAAAD---PNTPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGV 662 A T+ ++ SA+ + P+ L+ F G PP +L G PGD+G+D GL +DPE N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P+ ++ + I +G EG R + P TDPI P G+ Sbjct: 44 ATTKKLTASASTSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR--IAGGPLGEVTDPIYPGGSFDPLGL 208
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.072e-15 Identity = 48/145 (33.10%), Postives = 70/145 (48.28%), Query Frame = 3 Query: 300 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGVGVPRGCFG 686 PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P+ ++ + + +G EG R + P DP+ P G+ FG Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR--IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFG 207
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 5.072e-15 Identity = 52/162 (32.10%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 228 GTRSVSVSAAAADPNTPLWFPGSTP----------PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILP 635 G VS+ T +W+ P P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L++ +P ++ + + +G+ EG R V P DPI P Sbjct: 31 GGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR--VGGGPLGEGLDPIYP 190
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.624e-15 Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 300 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWA 590 PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P+ ++ + + +G EG R A Sbjct: 66 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIA 178
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.624e-15 Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 300 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWA 590 PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P+ ++ + I +G EG R A Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 177
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.476e-14 Identity = 48/137 (35.04%), Postives = 69/137 (50.36%), Query Frame = 3 Query: 300 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGV 662 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L++ +P+ ++ + I +G EG R + P TDPI P G+ Sbjct: 63 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYR--IAGGPLGEVTDPIYPGGSFDPLGL 197
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.927e-14 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 303 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKR 584 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L++ +P ++ + + +G+ EG R Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR 175
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.927e-14 Identity = 52/142 (36.62%), Postives = 70/142 (49.30%), Query Frame = 3 Query: 285 FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGV 662 F GS PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL K G+ W+ AG L++ +P+ ++ + I +G EG R V P DPI P G+ Sbjct: 61 FSGS-PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR--VAGGPLGEVEDPIYPGGSFDPLGL 199 The following BLAST results are available for this feature:
BLAST of EY753476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753476 ID=EY753476; Name=EY753476; organism=Citrus sinensis; type=EST; length=909bpback to top |