EY753476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14 Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 300 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWA 590 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L++ +P+ ++ V+ + +G EG R A Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIA 177
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14 Identity = 45/130 (34.62%), Postives = 63/130 (48.46%), Query Frame = 3 Query: 234 RSVSVSAAAADPNTPLWFP---------GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPTTLFIVEKIFIGWA 572 R + A A +P + P P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P +L + I WA Sbjct: 36 RKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP-SLVHAQSILAIWA 164
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14 Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 3 Query: 303 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWA 590 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P+ ++ + I +G EG R A Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIA 179
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14 Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 3 Query: 303 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWA 590 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P+ ++ + I +G EG R A Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 177
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14 Identity = 40/98 (40.82%), Postives = 55/98 (56.12%), Query Frame = 3 Query: 303 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPTTLFIVEKIFIGWA 572 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P +L + I WA Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP-SLVHAQSILAIWA 162
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14 Identity = 49/137 (35.77%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 300 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDP--------TTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGV 662 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L++ P ++ + I +G EG R V P TDPI P G+ Sbjct: 78 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYR--VAGGPLGEVTDPIYPGGNFDPLGL 212
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14 Identity = 49/137 (35.77%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 300 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDP--------TTLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGV 662 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L++ P ++ + I +G EG R V P TDPI P G+ Sbjct: 78 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYR--VAGGPLGEVTDPIYPGGNFDPLGL 212
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14 Identity = 40/98 (40.82%), Postives = 55/98 (56.12%), Query Frame = 3 Query: 303 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPTTLFIVEKIFIGWA 572 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P +L + I WA Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP-SLVHAQSILAIWA 164
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14 Identity = 40/98 (40.82%), Postives = 55/98 (56.12%), Query Frame = 3 Query: 303 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPTTLFIVEKIFIGWA 572 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L++ +P +L + I WA Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP-SLVHAQSILAIWA 164
BLAST of EY753476 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14 Identity = 52/162 (32.10%), Postives = 78/162 (48.15%), Query Frame = 3 Query: 234 RSVSVSAAAADPNTPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEFFPDPT--------TLFIVEKIFIGWAEGKRWAVIIKPGCVNTDPILPNNKLTGPGV 662 + VS S+ PN + F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ G L++ +P+ ++ + + +G EG R V +P DP+ P G+ Sbjct: 43 KPVSSSSPWYGPNRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR--VAGEPLGEVVDPLYPGGSFDPLGL 201 The following BLAST results are available for this feature:
BLAST of EY753476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753476 ID=EY753476; Name=EY753476; organism=Citrus sinensis; type=EST; length=909bpback to top |