EY753472

Overview
NameEY753472
Unique NameEY753472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_SALDC (Probable GTP-binding protein engB OS=Salmonella dublin (strain CT_02021853) GN=engB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22
Identity = 56/131 (42.75%), Postives = 74/131 (56.49%), Query Frame = 3
Query:  441 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQI 833
            Q  FV S+      PSD   E A  GRSN GKSS LN+L  +K LA TSKTP +TQ IN F + +   LVDLPGYGYA  P E++  W +   +Y   R +L  + +L+D   P K +D +   W  ++ I
Sbjct:    8 QTHFVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAVESNI 138          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_LACRJ (Probable GTP-binding protein engB OS=Lactobacillus reuteri (strain JCM 1112) GN=engB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22
Identity = 56/135 (41.48%), Postives = 73/135 (54.07%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            +V   +   S+V  E  P   +PE ALVGRSNVGKSSL N L+ R+  A TS  P KTQ +N + + D  Y VD+PGYGYA   ++ R  + K  + Y   R  L  V  L+DA     P D+   +WL    IP
Sbjct:    2 EVHNVDLTISAVSDEQYPKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYDVEDKVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPTPDDVNMYNWLQYYNIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_LACRD (Probable GTP-binding protein engB OS=Lactobacillus reuteri (strain DSM 20016) GN=engB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22
Identity = 56/135 (41.48%), Postives = 73/135 (54.07%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            +V   +   S+V  E  P   +PE ALVGRSNVGKSSL N L+ R+  A TS  P KTQ +N + + D  Y VD+PGYGYA   ++ R  + K  + Y   R  L  V  L+DA     P D+   +WL    IP
Sbjct:    2 EVHNVDLTISAVSDEQYPKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYDVEDKVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPTPDDVNMYNWLQYYNIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_HAEIN (Probable GTP-binding protein engB OS=Haemophilus influenzae GN=engB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22
Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  441 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            +  F+ S+      P D   E A  GRSN GKS+ LN+L  +K LA TSKTP +TQ IN F +  +  LVDLPGYGYAA P +++  W K   +Y   R  L  + +L+D   P K +D +   W     +P
Sbjct:   10 KTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEVEPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHPLKDLDQQMIEWAVSANLP 141          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_HAEIG (Probable GTP-binding protein engB OS=Haemophilus influenzae (strain PittGG) GN=engB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22
Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  441 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            +  F+ S+      P D   E A  GRSN GKS+ LN+L  +K LA TSKTP +TQ IN F +  +  LVDLPGYGYAA P +++  W K   +Y   R  L  + +L+D   P K +D +   W     +P
Sbjct:   10 KTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEVEPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHPLKDLDQQMIEWAVSANLP 141          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_HAEI8 (Probable GTP-binding protein engB OS=Haemophilus influenzae (strain 86-028NP) GN=engB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22
Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  441 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            +  F+ S+      P D   E A  GRSN GKS+ LN+L  +K LA TSKTP +TQ IN F +  +  LVDLPGYGYAA P +++  W K   +Y   R  L  + +L+D   P K +D +   W     +P
Sbjct:   10 KTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEVEPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHPLKDLDQQMIEWAVSANLP 141          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_EHRCJ (Probable GTP-binding protein engB OS=Ehrlichia canis (strain Jake) GN=engB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22
Identity = 58/136 (42.65%), Postives = 82/136 (60.29%), Query Frame = 3
Query:  429 AQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSW-YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQI 833
            A +++ EF+  +   +  P+  +PE A+ GRSNVGKSSL+N++   KK A TS  P  T+ IN + IN S+  LVDLPGYGY+ A R    ++    + Y LN   L+ V LLID  +  K IDL++ +WL  N I
Sbjct:    5 AIMSKCEFIIGATHVKSFPNFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSRPGCTKQINFYLINKSFMVLVDLPGYGYSKATRATINNYLFLMEYYLLNSKNLLKVILLIDVKVGFKEIDLDFINWLELNHI 140          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_CHLL2 (Probable GTP-binding protein engB OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=engB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22
Identity = 58/129 (44.96%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 818
            ++  A F KS       P +  PE   VGRSNVGKSSLLNSL   K LA TS TP KT+ IN+F+IN + Y VDLPGYGYAA     +  W      Y   R  +  V +L+D+  PA   D E  ++L
Sbjct:    2 KIINAVFYKSVSALTGLPEETFPEIVFVGRSNVGKSSLLNSLTGVKGLAKTSSTPGKTRLINYFQINGNIYFVDLPGYGYAAVGHAEKAHWGNLLVSYIEKRRAIALVLVLVDSRHPAMASDREMMAFL 130          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_BACSK (Probable GTP-binding protein engB OS=Bacillus clausii (strain KSM-K16) GN=engB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.393e-22
Identity = 56/135 (41.48%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            +V +AE    +V+ E  P + LPE AL GRSNVGKSS +N ++ RK LA TS  P KTQ +N + IN+  Y VD+PGYGYA   +  R  W K  + Y   R  L +V  L+D        D    +W+    IP
Sbjct:    2 KVTKAELAHVAVKAEQYPKNQLPELALAGRSNVGKSSFINKMLNRKGLARTSGQPGKTQTLNFYEINERLYFVDVPGYGYAKVSKTERAAWGKMIETYLSEREELKAVLQLVDIRHRPSEDDQLMYNWMKHYGIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_PSYA2 (Probable GTP-binding protein engB OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=engB PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.819e-22
Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = 3
Query:  480 CPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP*H 842
            CP+D   E A  GRSN GKSS +N+L  +++LA +SKTP +TQ IN F + D+   LVDLPGYGYAA P E++ +W    ++Y ++RS+L  + L+ D   P K  D +   W    ++P H
Sbjct:    9 CPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQMINFFNVGDADRRLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMTDIRHPLKFFDEQMLRWAKDGELPVH 130          
The following BLAST results are available for this feature:
BLAST of EY753472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENGB_SALDC1.393e-2242.75Probable GTP-binding protein engB OS=Salmonella du... [more]
ENGB_LACRJ1.393e-2241.48Probable GTP-binding protein engB OS=Lactobacillus... [more]
ENGB_LACRD1.393e-2241.48Probable GTP-binding protein engB OS=Lactobacillus... [more]
ENGB_HAEIN1.393e-2240.15Probable GTP-binding protein engB OS=Haemophilus i... [more]
ENGB_HAEIG1.393e-2240.15Probable GTP-binding protein engB OS=Haemophilus i... [more]
ENGB_HAEI81.393e-2240.15Probable GTP-binding protein engB OS=Haemophilus i... [more]
ENGB_EHRCJ1.393e-2242.65Probable GTP-binding protein engB OS=Ehrlichia can... [more]
ENGB_CHLL21.393e-2244.96Probable GTP-binding protein engB OS=Chlorobium li... [more]
ENGB_BACSK1.393e-2241.48Probable GTP-binding protein engB OS=Bacillus clau... [more]
ENGB_PSYA21.819e-2243.44Probable GTP-binding protein engB OS=Psychrobacter... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-B12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753472 ID=EY753472; Name=EY753472; organism=Citrus sinensis; type=EST; length=879bp
ATTCCAAGACCGACCCACGCGTCCGAAAATAATCTTGTCTTTCCCCATTC
GTCACAGCACCGCAGCAGCGAAGACATGGCCACTCAAAATCTCTTGTAAT
CGAAAACCGCACACACAGAAAAATGCTTTTTTCTCAGCTTCCAAGACTCA
ACTTTTCAATATTCGTAAAGCCACCCCTGTCTCTCCGCTCACACTTCACC
CTCTTACCAAAACACAGGCTCAACTTCTCAGCGCTCAAATCCACACTCTC
CACAACCGAACCGATACCCATATCCCACGCGGTAGAACCAGAACCAGAAC
CCCACGTGGCAATATCACTCGAAAAGCTATTTGTCCCGCCGGAAACAGAG
GTCTCAATCGATGATTCGTCGTTGAGTACGAGAATATTGAAGGGTTCGAA
CATAGTGTTGAGTAAGTACGCAAGGGATGCTCAAGTTGCACAAGCTGAGT
TCGTGAAGAGTAGTGTTAGGACTGAGGATTGCCCCTCTGATGGGTTGCCT
GAATTTGCGCTGGTGGGCAGGTCTAATGTTGGCAAATCTTCGCTTCTTAA
TTCACTTGTTAGAAGGAAGAAGCTTGCTCTCACATCTAAGACACCTGNGA
AAACACAATGCATCAATCATTTTCGGATAAATGATAGTTGGTACTTGGTG
GATTTGCCTGGATATGGGTATGCAGCTGCTCCTCGGGAACTTCGAACCGA
CTGGGACAAATTCACTAAAGACTATTTCCTTAATCGCTCAACTTTGGTCT
CAGTGTTCCTTCTCATAGATGCTAGCATTCCTGCAAAACCTATTGATCTT
GAATATGCTAGTTGGCTGGGACAGAATCAGATTCCATGACATTAGTCTTC
ACCAATGCGACAAGCGGAAGAAGAAAAGA
back to top