EY753472

Overview
NameEY753472
Unique NameEY753472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_FRATM (Probable GTP-binding protein engB OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=engB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18
Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  438 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 797
            ++A+++  + +    P D   E A  GRSN GKSS LN+L  +K LA  SKTP +TQ IN F + ++  LVDLPGYGYA     ++  W    ++Y  +R  L  + LL+D+    K  D
Sbjct:    4 SKAKYIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLGNNNRLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVLLVDSRHELKEFD 123          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_FRATH (Probable GTP-binding protein engB OS=Francisella tularensis subsp. holarctica (strain LVS) GN=engB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18
Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  438 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 797
            ++A+++  + +    P D   E A  GRSN GKSS LN+L  +K LA  SKTP +TQ IN F + ++  LVDLPGYGYA     ++  W    ++Y  +R  L  + LL+D+    K  D
Sbjct:    4 SKAKYIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLGNNNRLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVLLVDSRHELKEFD 123          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_FRATF (Probable GTP-binding protein engB OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=engB PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18
Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  438 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 797
            ++A+++  + +    P D   E A  GRSN GKSS LN+L  +K LA  SKTP +TQ IN F + ++  LVDLPGYGYA     ++  W    ++Y  +R  L  + LL+D+    K  D
Sbjct:    4 SKAKYIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLFDLGNNNRLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVLLVDSRHELKEFD 123          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_BARHE (Probable GTP-binding protein engB OS=Bartonella henselae GN=engB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18
Identity = 54/128 (42.19%), Postives = 72/128 (56.25%), Query Frame = 3
Query:  450 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSW----------YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 803
            F++        P +G PE A  GRSNVGKSSL+N+LVR+K LA TS  P +TQ +N+F + D +           LVD+PGYG+A AP+ L   W      Y   R+TL  V++LID+    K  D E
Sbjct:   17 FIRGVPTIRFLPPEGPPEIAFAGRSNVGKSSLINALVRQKSLARTSNMPGRTQELNYF-VPDGFSGRPEDLPPIALVDMPGYGFAKAPKNLVDAWTDLIYSYLRGRTTLKRVYVLIDSRHGIKKNDAE 143          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_AGRRK (Probable GTP-binding protein engB OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=engB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18
Identity = 57/133 (42.86%), Postives = 75/133 (56.39%), Query Frame = 3
Query:  450 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSW----------YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 818
            F++     +  P +G  E A  GRSNVGKSSL+N+LV  K LA TS TP +TQ +N+F + D +           LVD+PGYGYA AP+E    W K   DY   R+TL  V++LID+    K  D E  + L
Sbjct:   19 FIRGVPAMKFLPPEGPLEVAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYF-VPDGFSGEGGDLPPMALVDMPGYGYAEAPKEQVDAWTKLVFDYLRGRTTLKRVYVLIDSRHGIKKNDEEVLALL 150          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_STAAR (Probable GTP-binding protein engB OS=Staphylococcus aureus (strain MRSA252) GN=engB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = 3
Query:  447 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            E + S+V+ +  P   L E AL GRSNVGKS+ +NS++ RK +A TS+ P KTQ +N + I++    VD+PGYGYA   +  R  + K  ++Y   R  L  V  L+D        D+   ++L    IP
Sbjct:    9 ELIISAVKEDQYPETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDPTQDDILMYNYLKHFDIP 138          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_HYPNA (Probable GTP-binding protein engB OS=Hyphomonas neptunium (strain ATCC 15444) GN=engB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 52/113 (46.02%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  441 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRIND--SWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDA 773
            +AEFV   V     P     E    GRSNVGKSSL+N+L  R KLA +S  P +T+ +N+F I D    YLVDLPG+GYA   +     W K  K Y   R +L  VFLL+DA
Sbjct:   24 KAEFVMGVVSLSGLPPADRSEVCFAGRSNVGKSSLINALTGRAKLARSSAEPGRTRELNYFDIGDEGKLYLVDLPGFGYAKVSKTQTAAWTKLIKSYLRGRPSLRRVFLLVDA 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_GRABC (Probable GTP-binding protein engB OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=engB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 3
Query:  441 QAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDL 800
            +  F   + R +  P     E A  GRSNVGKS+L+N+L  RK LA  S  P +T+ +N F + D   LVD+PGYGYA A ++++ DW      Y   R  L  V LL+DA +  K  D+
Sbjct:   32 ECTFFHGTQRLDQLPPPMGVEIAFAGRSNVGKSTLVNALTGRKTLARASSQPGRTKQLNFFNLADQLVLVDMPGYGYAQAAKDVKEDWQGLMFSYLRGRPNLRRVMLLVDARVEFKASDI 151          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_DESAD (Probable GTP-binding protein engB OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=engB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 3
Query:  498 PEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRIN-DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            P+  L GRSNVGKSSL+N L  RKKLA  S TP KT+ +N++ ++   +Y+VDLPGYGYA   +  R  W K    Y L+ + + +  +L+D+    +  DL+  S+     IP
Sbjct:   23 PQIILAGRSNVGKSSLINCLASRKKLAKISSTPGKTRSLNYYEVSPHGYYIVDLPGYGYARCSKTERAKWAKLIDKYLLDNAYVAAAAVLLDSRHNPQQNDLDLISYFKHCNIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_RHORT (Probable GTP-binding protein engB OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=engB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18
Identity = 54/130 (41.54%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  450 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRI-----NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQ 824
            FV   V  +  P   L E A  GRSNVGKSSL+N+L  RK LA TS TP +TQ +N+FR+     + +  +VDLPGYG+A AP++    W +    Y   R  L  V LLID+    K  D +    L +
Sbjct:   37 FVMGCVSLDTLPDHDLSEIAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQELNYFRLGPEAQDPALMMVDLPGYGFAEAPKDAVKRWTRLIMAYLRGRPALRRVCLLIDSRHGIKENDRDVMRMLDE 166          
The following BLAST results are available for this feature:
BLAST of EY753472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENGB_FRATM2.082e-1839.17Probable GTP-binding protein engB OS=Francisella t... [more]
ENGB_FRATH2.082e-1839.17Probable GTP-binding protein engB OS=Francisella t... [more]
ENGB_FRATF2.082e-1839.17Probable GTP-binding protein engB OS=Francisella t... [more]
ENGB_BARHE2.082e-1842.19Probable GTP-binding protein engB OS=Bartonella he... [more]
ENGB_AGRRK2.082e-1842.86Probable GTP-binding protein engB OS=Agrobacterium... [more]
ENGB_STAAR2.719e-1837.69Probable GTP-binding protein engB OS=Staphylococcu... [more]
ENGB_HYPNA2.719e-1846.02Probable GTP-binding protein engB OS=Hyphomonas ne... [more]
ENGB_GRABC2.719e-1840.00Probable GTP-binding protein engB OS=Granulibacter... [more]
ENGB_DESAD2.719e-1841.23Probable GTP-binding protein engB OS=Desulfovibrio... [more]
ENGB_RHORT3.551e-1841.54Probable GTP-binding protein engB OS=Rhodospirillu... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-B12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753472 ID=EY753472; Name=EY753472; organism=Citrus sinensis; type=EST; length=879bp
ATTCCAAGACCGACCCACGCGTCCGAAAATAATCTTGTCTTTCCCCATTC
GTCACAGCACCGCAGCAGCGAAGACATGGCCACTCAAAATCTCTTGTAAT
CGAAAACCGCACACACAGAAAAATGCTTTTTTCTCAGCTTCCAAGACTCA
ACTTTTCAATATTCGTAAAGCCACCCCTGTCTCTCCGCTCACACTTCACC
CTCTTACCAAAACACAGGCTCAACTTCTCAGCGCTCAAATCCACACTCTC
CACAACCGAACCGATACCCATATCCCACGCGGTAGAACCAGAACCAGAAC
CCCACGTGGCAATATCACTCGAAAAGCTATTTGTCCCGCCGGAAACAGAG
GTCTCAATCGATGATTCGTCGTTGAGTACGAGAATATTGAAGGGTTCGAA
CATAGTGTTGAGTAAGTACGCAAGGGATGCTCAAGTTGCACAAGCTGAGT
TCGTGAAGAGTAGTGTTAGGACTGAGGATTGCCCCTCTGATGGGTTGCCT
GAATTTGCGCTGGTGGGCAGGTCTAATGTTGGCAAATCTTCGCTTCTTAA
TTCACTTGTTAGAAGGAAGAAGCTTGCTCTCACATCTAAGACACCTGNGA
AAACACAATGCATCAATCATTTTCGGATAAATGATAGTTGGTACTTGGTG
GATTTGCCTGGATATGGGTATGCAGCTGCTCCTCGGGAACTTCGAACCGA
CTGGGACAAATTCACTAAAGACTATTTCCTTAATCGCTCAACTTTGGTCT
CAGTGTTCCTTCTCATAGATGCTAGCATTCCTGCAAAACCTATTGATCTT
GAATATGCTAGTTGGCTGGGACAGAATCAGATTCCATGACATTAGTCTTC
ACCAATGCGACAAGCGGAAGAAGAAAAGA
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