EY753472

Overview
NameEY753472
Unique NameEY753472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13106 contig Csv1_Contig13106:6..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_CAMLR (Probable GTP-binding protein engB OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=engB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.142e-16
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  435 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRIN-----DSWYL--VDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 818
            +  A+F+ S+ + ++ P     E A +GRSNVGKSSL+N+L + K LA +S TP KTQ IN F ++     D + L  +DLPG+GYA   ++ +  W+K   ++   RS++     LID+      IDL    +L
Sbjct:    2 ILNAKFLISASKIDEAPQPIYTEIAFLGRSNVGKSSLINTLCKNKNLAKSSSTPGKTQLINFFEVDCKKDEDKFKLIFIDLPGFGYAKVSKKTKAIWNKNLDEFLKERSSIKLFIHLIDSRHENLDIDLNLDLYL 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_MYCPE (Probable GTP-binding protein engB OS=Mycoplasma penetrans GN=engB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 50/123 (40.65%), Postives = 70/123 (56.91%), Query Frame = 3
Query:  450 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 818
            F+KS   + D  +D   E   +GRSNVGKSSL+N+L   K +A TS TP +TQ  N +   D + L+DLPGYGYA   +    +  K   +Y   R  LV+VF +ID S+    +DL+ +  L
Sbjct:    4 FIKSCFSSNDWITDDKKEICFIGRSNVGKSSLINALANAK-IAKTSNTPGRTQLANFYDF-DKFRLIDLPGYGYAKVSKSKHFELSKIISEYIYLRKNLVAVFQIIDISV-ITDLDLQMSELL 123          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_MARMM (Probable GTP-binding protein engB OS=Maricaulis maris (strain MCS10) GN=engB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 3
Query:  462 SVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDS-WYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLE 803
            +V  +  P     E A  GRSNVGKSSL+N+L  +K LA  S  P +T+ +N F +      +VDLPGYGYA AP+ +   W + TK +   R  L  V+LLID+    K +DL+
Sbjct:    3 AVALDHLPEPDRLEVAFAGRSNVGKSSLINALTNQKGLARASGEPGRTRELNFFNVEGGDLRIVDLPGYGYAKAPKPVVEKWTRLTKAFLRGRVNLKRVYLLIDSRHGLKDVDLK 117          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_DIAST (Probable GTP-binding protein engB OS=Diaphorobacter sp. (strain TPSY) GN=engB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  444 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSW----YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 797
            A F+ ++ +    P+  +PE A VGRSN GKS+ +N+L ++++LA  SK P +TQ IN F +         L DLPGYGYAA  R  +  W +    Y ++R +L ++ LL D  +    +D
Sbjct:    7 ARFLTTAAQLHHLPAIEVPEIAFVGRSNAGKSTCINTLTQQRQLAFASKKPGRTQHINLFALGKQGATDAVLADLPGYGYAAVSRSDKLRWQQVMLSYLVSRESLTAIVLLCDPRLGLTELD 128          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_CAMJR (Probable GTP-binding protein engB OS=Campylobacter jejuni (strain RM1221) GN=engB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 53/136 (38.97%), Postives = 79/136 (58.09%), Query Frame = 3
Query:  435 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRI----NDSWY---LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFL-LIDASIPAKPIDLEYASWL 818
            +  A+F+ S V+ ++  S    E A +GRSNVGKSSL+NSL ++K LA +S TP KTQ IN F +    N+  +    +DLPG+GYA   + L+  W++   D FL   T + +F+ LID+      ID+    +L
Sbjct:    2 IISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVICKRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQ-NLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYL 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_CAMJE (Probable GTP-binding protein engB OS=Campylobacter jejuni GN=engB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 53/136 (38.97%), Postives = 79/136 (58.09%), Query Frame = 3
Query:  435 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRI----NDSWY---LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFL-LIDASIPAKPIDLEYASWL 818
            +  A+F+ S V+ ++  S    E A +GRSNVGKSSL+NSL ++K LA +S TP KTQ IN F +    N+  +    +DLPG+GYA   + L+  W++   D FL   T + +F+ LID+      ID+    +L
Sbjct:    2 IISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVICRRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQ-NLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYL 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_CAMJ8 (Probable GTP-binding protein engB OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=engB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16
Identity = 53/136 (38.97%), Postives = 79/136 (58.09%), Query Frame = 3
Query:  435 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRI----NDSWY---LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFL-LIDASIPAKPIDLEYASWL 818
            +  A+F+ S V+ ++  S    E A +GRSNVGKSSL+NSL ++K LA +S TP KTQ IN F +    N+  +    +DLPG+GYA   + L+  W++   D FL   T + +F+ LID+      ID+    +L
Sbjct:    2 IISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVTCKRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQ-NLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYL 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_MYCH2 (Probable GTP-binding protein engB OS=Mycoplasma hyopneumoniae (strain 232) GN=engB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.948e-16
Identity = 48/117 (41.03%), Postives = 71/117 (60.68%), Query Frame = 3
Query:  447 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPID 797
            +F+KS    E+C S+  P+FA +GRSNVGKS+L+N+L   KK+A TS  P +TQ +N ++       VDLPGYGYAA  +  +   D+    YF     + +VFL++DA +    +D
Sbjct:   25 KFLKSC--PENCYSE--PQFAFIGRSNVGKSTLINALAN-KKIAKTSTKPGRTQLLNFYKNESEKLFVDLPGYGYAAVSKTKKHQIDRIIAGYFQKDQPISAVFLILDARVGFTNLD 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_CAMJJ (Probable GTP-binding protein engB OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=engB PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.545e-16
Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 3
Query:  444 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRI----NDSWY---LVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFL-LIDASIPAKPIDLEYASWL 818
            A+F+ S V+ ++  S    E A +GRSNVGKSSL+NSL ++K LA +S TP KTQ IN F +    N+  +    +DLPG+GYA   + L+  W++   D FL   T + +F+ LID+      ID+    +L
Sbjct:    5 AKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVTCKRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQ-NLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYL 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_WOLSU (Probable GTP-binding protein engB OS=Wolinella succinogenes GN=engB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16
Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 3
Query:  435 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRI-------NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLG 821
            V ++ F+ S+      P     E   +GRSNVGKS+L+N +V  K LA +S TP KTQ IN+F             +LVDLPG+GYA   +E+R DW +    +   R ++     LIDA  P   ID E  + +G
Sbjct:    4 VVESSFLTSASALSQTPPPKNSEVVFIGRSNVGKSTLINLIVDSKGLAKSSSTPGKTQLINYFETIWKRGEERIPLWLVDLPGFGYAKVSKEMRKDWGEKLIHFLQERRSIKLFVQLIDARHPDLAIDAEAWAMIG 139          
The following BLAST results are available for this feature:
BLAST of EY753472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENGB_CAMLR1.142e-1637.04Probable GTP-binding protein engB OS=Campylobacter... [more]
ENGB_MYCPE1.492e-1640.65Probable GTP-binding protein engB OS=Mycoplasma pe... [more]
ENGB_MARMM1.492e-1641.74Probable GTP-binding protein engB OS=Maricaulis ma... [more]
ENGB_DIAST1.492e-1636.89Probable GTP-binding protein engB OS=Diaphorobacte... [more]
ENGB_CAMJR1.492e-1638.97Probable GTP-binding protein engB OS=Campylobacter... [more]
ENGB_CAMJE1.492e-1638.97Probable GTP-binding protein engB OS=Campylobacter... [more]
ENGB_CAMJ81.492e-1638.97Probable GTP-binding protein engB OS=Campylobacter... [more]
ENGB_MYCH21.948e-1641.03Probable GTP-binding protein engB OS=Mycoplasma hy... [more]
ENGB_CAMJJ2.545e-1639.85Probable GTP-binding protein engB OS=Campylobacter... [more]
ENGB_WOLSU3.324e-1637.50Probable GTP-binding protein engB OS=Wolinella suc... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-B12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753472 ID=EY753472; Name=EY753472; organism=Citrus sinensis; type=EST; length=879bp
ATTCCAAGACCGACCCACGCGTCCGAAAATAATCTTGTCTTTCCCCATTC
GTCACAGCACCGCAGCAGCGAAGACATGGCCACTCAAAATCTCTTGTAAT
CGAAAACCGCACACACAGAAAAATGCTTTTTTCTCAGCTTCCAAGACTCA
ACTTTTCAATATTCGTAAAGCCACCCCTGTCTCTCCGCTCACACTTCACC
CTCTTACCAAAACACAGGCTCAACTTCTCAGCGCTCAAATCCACACTCTC
CACAACCGAACCGATACCCATATCCCACGCGGTAGAACCAGAACCAGAAC
CCCACGTGGCAATATCACTCGAAAAGCTATTTGTCCCGCCGGAAACAGAG
GTCTCAATCGATGATTCGTCGTTGAGTACGAGAATATTGAAGGGTTCGAA
CATAGTGTTGAGTAAGTACGCAAGGGATGCTCAAGTTGCACAAGCTGAGT
TCGTGAAGAGTAGTGTTAGGACTGAGGATTGCCCCTCTGATGGGTTGCCT
GAATTTGCGCTGGTGGGCAGGTCTAATGTTGGCAAATCTTCGCTTCTTAA
TTCACTTGTTAGAAGGAAGAAGCTTGCTCTCACATCTAAGACACCTGNGA
AAACACAATGCATCAATCATTTTCGGATAAATGATAGTTGGTACTTGGTG
GATTTGCCTGGATATGGGTATGCAGCTGCTCCTCGGGAACTTCGAACCGA
CTGGGACAAATTCACTAAAGACTATTTCCTTAATCGCTCAACTTTGGTCT
CAGTGTTCCTTCTCATAGATGCTAGCATTCCTGCAAAACCTATTGATCTT
GAATATGCTAGTTGGCTGGGACAGAATCAGATTCCATGACATTAGTCTTC
ACCAATGCGACAAGCGGAAGAAGAAAAGA
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