EY753469

Overview
NameEY753469
Unique NameEY753469
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753469 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.280e-13
Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 3 
Query:  495 PKFGMTSVCGRRRDMEDTVSIHPSFCKQNC-----------------AHFYGVFDGHGCSHVAMKCKDRLHDILXEEI-----ESCNVVEESVKWKQTMXASFGKMD 749
            P +G+TS+CGRR +MED+VS  P F + +                  AHF+GV+DGHG S VA  C++R+H  L EEI     E C+      KWK+ +  SF ++D
Sbjct:  111 PLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVD 217
[Close]
BLAST of EY753469 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.621e-11
Identity = 38/100 (38.00%), Postives = 53/100 (53.00%), Query Frame = 3 
Query:  504 GMTSVCGRRRDMEDTVSIHPSFCK-------------QNCAHFYGVFDGHGCSHVAMKCKDRLHDILXEEIESCNVVEES-----VKWKQTMXASFGKMD 749
            G  SV GRRR+MED V+I  +F               +    F+ V+DGHG S VA  C+ R+H +L EE+    +  +S     V+WK+ M ASF +MD
Sbjct:   79 GSVSVIGRRREMEDAVAIERTFMASTGDGAGAIRGGGEGEEDFFAVYDGHGGSRVAEACRKRMHVVLAEEVSLRRLRGQSASGGDVRWKEAMLASFARMD 178

HSP 2 Score: 24.2534 bits (51), Expect = 1.621e-11
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 2 
Query:  866 KLIXFNCGNSRAVLCQTG 919
            +++  NCG+SRAVL + G
Sbjct:  216 RIVVANCGDSRAVLSRGG 233
The following BLAST results are available for this feature:
BLAST of EY753469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
P2C77_ARATH8.280e-1339.25Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C51_ORYSJ1.621e-1138.00Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-B08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753469 ID=EY753469; Name=EY753469; organism=Citrus sinensis; type=EST; length=926bp
ATTCAAGGCCTGACCCACGCGTCCGCTCATTTTNCTGTTGTCTCATCTTT
GTCTACGCCAACGTATTATTCAGTAGCAGCTCTCTTTGATAGATAGCTAC
TTAGCGCTAAGGAAATTAGAATTTATTGAAGTTTTTTCATTTTTTTGGTC
GATCATTTTTCTCGGAGCTCTTCACTTTAATGGCGGGGATTTGCTGTGGA
GTAGTTGGTGAGAGTGAACCAGCGGTATCAGTTGAGCAAAGCTCACGAGC
TTCTAGACGGAGGAGGTTAGAGCTCCGTCCGTTTAACTTGGTTGCAGACG
TGGCAGTTTTGCCGCCGTCGGAAAACGTTCGGAAACGAAAGAAGCTTGAA
CTTTACACTACCTTAACAGCTGCACATGCTCGAGAAAACACCGAACAGAA
TTGTGAATCGAAAGATTCAGAGCGAGGTCGTACCGTAAACAAGGAAGAAT
TAGTCGGGAATAATGAAGCAGCTGATGATTTGGTAAATGATAACCCCAAG
TTCGGGATGACTTCAGTTTGCGGTAGAAGACGAGATATGGAGGATACTGT
GTCAATTCACCCGTCGTTTTGCAAGCAAAATTGCGCTCACTTCTACGGCG
TGTTCGACGGTCATGGTTGCTCACATGTGGCGATGAAGTGTAAAGATCGG
TTGCATGATATACTTANGGAGGAGATTGAATCTTGTAACGTTGTTGAAGA
ATCGGTGAAGTGGAAGCAGACAATGCANGCGAGCTTTGGGAAGATGGATA
GGGGAGTGCCAGATTGGAGTGTGAGTTTCAAGATCTCTAACTGCCGCTGC
GAGTTACAGACCTCCGCATGCGACGCCGTTGGATCTACCGCCGTCGTTGC
TGGCGTCACTCCTGAAAGCTTATCGNTTTTAACTGCGGCAACTCTCGTGC
TGTGCTCTGCCAAACGGGGTCCGGGT
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