EY753463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_DELAS (50S ribosomal protein L28 OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=rpmB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LR+S+ AL+ I+KNG+D+V R Sbjct: 3 RVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSVLADLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_ACISJ (50S ribosomal protein L28 OS=Acidovorax sp. (strain JS42) GN=rpmB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LR+S+ AL+ I+KNG+D+V R Sbjct: 3 RVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSVLADMR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_ACIAC (50S ribosomal protein L28 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rpmB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LR+S+ AL+ I+KNG+D+V R Sbjct: 3 RVCDVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSVLADLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RK28_GALSU (50S ribosomal protein L28, chloroplastic OS=Galdieria sulphuraria GN=rpl28 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLD 472 R C K SN ANKVS SNHK+ + QFVNLQ KKVW K+++KLR+STK +K + K +D Sbjct: 3 RKCQLLFKTSNTANKVSHSNHKSKRLQFVNLQKKKVWSSLKKKWIKLRISTKMIKILNKKNID 65
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_METFK (50S ribosomal protein L28 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rpmB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGKK N VS +N+KT +R NLQ +K W E+ R+V LR++ AL+TI+KNG+DAV R Sbjct: 3 RVCQVTGKKPMVGNNVSHANNKTKRRFLPNLQNRKFWVESENRWVSLRITNAALRTIDKNGIDAVLADLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_CHRVO (50S ribosomal protein L28 OS=Chromobacterium violaceum GN=rpmB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.712e-11 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGK+ N VS +N+KT +R NLQY+K W E+ R+V+LR+S AL+TI+K G+D V R Sbjct: 3 RVCKVTGKRPMTGNNVSHANNKTKRRFLPNLQYRKFWVESENRWVRLRVSNAALRTIDKVGIDVVLADLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_VARPS (50S ribosomal protein L28 OS=Variovorax paradoxus (strain S110) GN=rpmB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGK N VS +N+KT +R NLQY++ W E R+V+LR+S+ AL+ I+KNG+DAV R Sbjct: 3 RVCDVTGKGPMVGNNVSHANNKTKRRFLPNLQYRRFWVETENRWVRLRVSSAALRLIDKNGIDAVLADLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_POLNA (50S ribosomal protein L28 OS=Polaromonas naphthalenivorans (strain CJ2) GN=rpmB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLR 505 RVC TGK N VS +N+KT +R NLQY+++W E+ R+V+LR++ L+ I+KNG+DAV +DLR Sbjct: 3 RVCQVTGKGPMVGNNVSHANNKTKRRFMPNLQYRRIWVESENRWVRLRITAAGLRLIDKNGIDAVL----VDLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_LARHH (50S ribosomal protein L28 OS=Laribacter hongkongensis (strain HLHK9) GN=rpmB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGK+ N VS +N+KT +R NLQY++ W E+ R+V++R+S AL+TI+K G+DAV R Sbjct: 3 RVCKVTGKRPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRMRVSNAALRTIDKVGIDAVLADLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_ACIF5 (50S ribosomal protein L28 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rpmB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGKK N VS +++KT +R NLQY + W E+ R+V++R+STK ++TI+K G+D V R Sbjct: 3 RVCKVTGKKPMAGNNVSHAHNKTRRRFLPNLQYHRFWVESENRWVRMRVSTKGIRTIDKKGIDVVLADLR 72 The following BLAST results are available for this feature:
BLAST of EY753463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753463 ID=EY753463; Name=EY753463; organism=Citrus sinensis; type=EST; length=823bpback to top |