EY753460

Overview
NameEY753460
Unique NameEY753460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.550e-26
Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 2
Query:   98 NAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 379
            +AITCG+V  +LAPC+ +L+ GG  P   CC GVR+LN AA TTPDRQAACNCLK A  SI  +NAN AA LP +C V+IPYKIS +T+C+ +R
Sbjct:   23 SAITCGRVDTALAPCLGYLQ-GGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115          
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 54/93 (58.06%), Postives = 64/93 (68.82%), Query Frame = 2
Query:   98 NAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 376
            +AI+CGQVT  L PC  +L  GG  PP  CCNGVR LN AA+TTPDRQ AC CLK    +   IN N A  LP +CG+SI YKI+PN DCS++
Sbjct:   24 DAISCGQVTSGLVPCFGYLAAGGPVPPA-CCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115          
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 2
Query:   92 VTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 379
            V  AI+CG V GSLAPC  +L  GG   PP CC GV++LN  A+TTPDRQ AC C++   +SI G+N ++A+GLP +CGVSIPY IS +T+C+ ++
Sbjct:   21 VDAAISCGTVAGSLAPCATYLSKGG-LVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115          
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.127e-25
Identity = 55/95 (57.89%), Postives = 68/95 (71.58%), Query Frame = 2
Query:  101 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINAN--VAAGLPRQCGVSIPYKISPNTDCSRVR 379
            A++CGQV  +L PCI ++  GG   P  CC GVRSL   A+TT DRQ+ CNCLKQA   IP  NAN  +AAGLP +CGV+IPYKISP+TDC  ++
Sbjct:   30 AVSCGQVVNNLTPCINYVANGGALNPS-CCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123          
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.127e-25
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 2
Query:   89 PVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 379
            P   A+TCGQVT  LAPC+ +L+  GR P   CC GV++L G+A+TT DR+ AC CLK A  +I GI+ N AAG+P  C V+IPYKISP+TDCS V+
Sbjct:   20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  101 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 376
            AI+CGQV  +++PC+++ R GG  P   CC+GVRSLN AA TT DR+ ACNCLK    SI G+NA  AA +P +CGVSIPY ISP+ DCS V
Sbjct:   27 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117          
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 2
Query:   89 PVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 379
            P   A+TCGQVT  LAPC+ +L+  GR P   CC GV+ L G+A+TT DR+ AC CLK A  +I GI+ N AAG+P  C V+IPYKISP+TDCS V+
Sbjct:   20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  101 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 376
            AITCGQV  ++ PC+ + R GG  P   CC+GVRSL  AA TT DR+ ACNCLK A R I G+NA  AA +P +CGVS+PY IS + DCSRV
Sbjct:   25 AITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115          
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  101 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 376
            AITCGQV  ++ PC+ + R GG  P   CC+GVRSL  AA TT DR+ ACNCLK A R I G+NA  AA +P +CGVS+PY IS + DCSRV
Sbjct:   25 AITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115          
BLAST of EY753460 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  101 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 376
            AI+CGQV  +++PC+++ R GG  P   CC+GVRSLN AA TT DR+ ACNCLK    SI G+NA  AA +P +CGVSIPY ISP+ DCS V
Sbjct:   26 AISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116          
The following BLAST results are available for this feature:
BLAST of EY753460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
NLTP_CICAR9.550e-2660.64Non-specific lipid-transfer protein OS=Cicer ariet... [more]
NLTP_GERHY1.629e-2558.06Non-specific lipid-transfer protein OS=Gerbera hyb... [more]
NLTP3_ARATH1.629e-2554.17Non-specific lipid-transfer protein 3 OS=Arabidops... [more]
NLTP3_PRUDU2.127e-2557.89Non-specific lipid-transfer protein 3 OS=Prunus du... [more]
NLTP1_SOLLC2.127e-2556.70Non-specific lipid-transfer protein 1 OS=Solanum l... [more]
NLTP2_ORYSI2.778e-2558.70Non-specific lipid-transfer protein 2 OS=Oryza sat... [more]
NLTP1_SOLPN2.778e-2556.70Non-specific lipid-transfer protein 1 OS=Solanum p... [more]
NLTP1_ORYSJ2.778e-2558.70Non-specific lipid-transfer protein 1 OS=Oryza sat... [more]
NLTP1_ORYSI2.778e-2558.70Non-specific lipid-transfer protein 1 OS=Oryza sat... [more]
NLT2B_ORYSJ2.778e-2558.70Non-specific lipid-transfer protein 2B OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-A09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753460 ID=EY753460; Name=EY753460; organism=Citrus sinensis; type=EST; length=619bp
CTATATTCAAGCAAAAGCCTCCCTGAAAAACCTCATGGCTGCTCTTAAGC
TTGTTTGTGCTTTGCTTTTGTGCATTCTGGTGACTGCCCCAGTGACTAAT
GCCATAACATGTGGGCAGGTGACAGGCTCCTTGGCTCCATGCATCGCTTT
CTTGAGAACTGGAGGGCGTTTTCCTCCACCCCCATGCTGTAACGGCGTCA
GGTCTCTCAACGGCGCCGCCAGAACCACCCCTGACCGCCAAGCTGCATGC
AACTGCTTGAAGCAAGCTTACCGATCAATCCCCGGCATCAACGCTAATGT
TGCCGCTGGCCTTCCTCGTCAATGTGGAGTCAGCATTCCTTACAAGATCA
GCCCCAACACTGACTGCTCTAGGGTCAGGTGAAGTTGAGTTTGAGCTCTG
TGACTTTCCAAGTATGATTGACTGAGAAGAATAAATAAATAAAGAATATA
TATGTTAATTTCTTTGTCCGAACGAGTCTCCACTTGTGTGAGTCTCACTC
TCATGTCATGTTTGTATCTTTGCTTTTAATATCATATTAAATATGTAAAC
GTGATCTGTGTTTTGAGTGATTAATTCTAGTTATTTTGTGGTATTATCTT
AAAAAAAAAAAAAAAAAAA
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