EY753457

Overview
NameEY753457
Unique NameEY753457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.956e-30
Identity = 67/120 (55.83%), Postives = 87/120 (72.50%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEE 793
            LS   L+GK+V +R D NVPLD ++NITD+ RI  A+P+I+ +I NG ++IL SHLGRPKG V P FSL+P+  RLSELL   V  A DCIG EV + V +L +  VL+LEN+RF+ EEE
Sbjct:    6 LSDISLQGKRVLMRVDFNVPLDQDRNITDEKRIVEALPSIRKVIDNGGRLILMSHLGRPKGKVNPAFSLSPVAKRLSELLDCPVTMAGDCIGTEVMQQVLALQDGDVLMLENLRFHPEEE 125          

HSP 2 Score: 22.3274 bits (46), Expect = 5.956e-30
Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  798 NDPEFAKKLAS 830
            NDP+FA++LAS
Sbjct:  127 NDPDFARELAS 137          
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.088e-29
Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 2
Query:  413 MAXKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEEK 796
            M  KSV ++   D+KGK VF R D NVP+ D + +TDDTRIRAA+PTI++L   GAKV+L+SHLGRPKG VT +  L P+  RL ELLG +V KAD+  G  V+K ++ L +  VL+LENVRFY  EEK
Sbjct:    1 MNKKSVKDI---DVKGKVVFCRVDFNVPMKDGK-VTDDTRIRAALPTIEYLTGQGAKVLLASHLGRPKGQVTEELRLTPVAKRLQELLGQEVKKADEAYGDNVKKQISDLKDGDVLVLENVRFYPGEEK 125          
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_PROM1 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pgk PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.711e-29
Identity = 69/129 (53.49%), Postives = 83/129 (64.34%), Query Frame = 2
Query:  413 MAXKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEEK 796
            M+ +S+  L   DL GK+V VR D NVPL D   ITDDTRIRAA+PTI  L+   A+VILS+H GRPKG V     L  +  RLSELLG  VVK + CIG E +  V ++    V+LLENVRF   EEK
Sbjct:    1 MSKRSLSSLGAEDLCGKRVLVRVDFNVPLGDEGQITDDTRIRAALPTINDLLDKSARVILSAHFGRPKGEVNETMRLTAVAQRLSELLGKTVVKTESCIGAEAKSKVDAMSNGDVVLLENVRFISGEEK 129          

HSP 2 Score: 23.8682 bits (50), Expect = 1.711e-29
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  792 KKNDPEFAKKLAS 830
            +KND EFAK+LAS
Sbjct:  128 EKNDTEFAKELAS 140          
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 129.798 bits (325), Expect = 1.855e-29
Identity = 68/121 (56.20%), Postives = 85/121 (70.25%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEEK 796
            L   D+KGK VF R D NVP+ D + +TDDTRIRAA+PTIKHL   GAKV+L+SHLGRPKG V  +  L P+  RL ELLG +V KAD+  G  V+  ++ + +  VL+LENVRFY  EEK
Sbjct:    6 LKDIDVKGKVVFCRVDFNVPMKDGE-VTDDTRIRAALPTIKHLADQGAKVLLASHLGRPKGEVVEELRLTPVAARLGELLGKEVKKADEAYGDAVKAQISEMKDGDVLVLENVRFYPGEEK 125          
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_EXISA (Phosphoglycerate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 68/117 (58.12%), Postives = 86/117 (73.50%), Query Frame = 2
Query:  449 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGVT-PKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEEK 796
            D+KGK+VF R D NVPL D   I D+TRI+AA+PTIKHL+  GAK++L+SHLGRPKG   P+FSLAP+  RL+ELLG  V   ++  GP  E+ VA+L E  V++LENVRFY  E K
Sbjct:   10 DVKGKRVFCRVDFNVPLKDGV-IQDETRIQAALPTIKHLLDGGAKLVLASHLGRPKGEKKPEFSLAPVAKRLAELLGKDVPLVEEAYGPVAEEAVANLSEGDVVVLENVRFYPGETK 125          
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_CHLL2 (Phosphoglycerate kinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=pgk PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.902e-29
Identity = 65/120 (54.17%), Postives = 85/120 (70.83%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEE 793
            LS   ++GK+V +R D NVPLD+ +NITDD RI  A+P+IK +I+NG ++IL SHLGRPKG     FSL P   RLSELL   V+ A DCIG EV + V +L +  V++LEN+RF+ EEE
Sbjct:    6 LSDITIQGKRVLMRVDFNVPLDEEKNITDDKRIVEALPSIKKIIENGGRLILMSHLGRPKGKPNQDFSLTPAAERLSELLDCPVIMAGDCIGTEVMQQVLALQDGEVIMLENLRFHPEEE 125          

HSP 2 Score: 23.483 bits (49), Expect = 2.902e-29
Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  798 NDPEFAKKLAS 830
            NDP+FAK+LAS
Sbjct:  127 NDPDFAKELAS 137          
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_PROMT (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=pgk PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.777e-29
Identity = 69/129 (53.49%), Postives = 83/129 (64.34%), Query Frame = 2
Query:  413 MAXKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEEK 796
            M+ +S+  L   DL GK+V VR D NVPL D   ITDDTRIRAA+PTI  L+   A+VILS+H GRPKG V     L  +  RLSELLG  VVK + CIG E +  V ++    V+LLENVRF   EEK
Sbjct:    1 MSKRSLSSLGAEDLCGKRVLVRVDFNVPLGDEGLITDDTRIRAALPTINDLLDKSARVILSAHFGRPKGQVNETMRLTAVAQRLSELLGKTVVKTESCIGAEAKSKVDAMSNGDVVLLENVRFISGEEK 129          

HSP 2 Score: 23.8682 bits (50), Expect = 3.777e-29
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  792 KKNDPEFAKKLAS 830
            +KND EFAK+LAS
Sbjct:  128 EKNDTEFAKELAS 140          
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.777e-29
Identity = 69/129 (53.49%), Postives = 86/129 (66.67%), Query Frame = 2
Query:  413 MAXKSVGELSGADLKGKKVFVRADLNVPLDDNQN-ITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEE 793
            M  K+V  L+ ADL GK+V VR D NVP+D     I+DDTRIRAA+PTI+ LI+ GAKVIL SH+GRP G V     L P+  RLSELLG +V+   DCIG  V   ++ +    V LLEN+RF+ EEE
Sbjct:    1 MPKKTVANLTEADLAGKRVLVRVDFNVPMDKATGAISDDTRIRAALPTIEDLIKKGAKVILCSHMGRPDGQVKENLRLTPVAKRLSELLGQEVIMCPDCIGEGVTAAISQMSNGQVALLENLRFHGEEE 129          

HSP 2 Score: 23.8682 bits (50), Expect = 3.777e-29
Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  798 NDPEFAKKLAS 830
            NDP+FAKKLA+
Sbjct:  131 NDPDFAKKLAA 141          
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_NEUCR (Phosphoglycerate kinase OS=Neurospora crassa GN=pgk-1 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.133e-29
Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAK-VILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEEKK 799
            +   DLKGK+V +R D NVPLD  + +T+  RI  A+PTIK+ + +GAK V+L SHLGRP G   PK+SL P+VP L +LLG +V  A DC+GPEVE++V       V+LLEN+RF+ EEE K
Sbjct:    9 IEDVDLKGKRVLIRVDFNVPLDAEKKVTNPQRIAGAIPTIKYALDHGAKAVVLMSHLGRPDGKPNPKYSLKPVVPELEKLLGKKVTFAPDCVGPEVEEIVNKADNGEVILLENLRFHIEEEGK 131          
BLAST of EY753457 vs. ExPASy Swiss-Prot
Match: PGK_BACME (Phosphoglycerate kinase OS=Bacillus megaterium GN=pgk PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.133e-29
Identity = 67/121 (55.37%), Postives = 86/121 (71.07%), Query Frame = 2
Query:  437 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPESGVLLLENVRFYXEEEK 796
            L   D+KGK+VF R D NVP+ D + +TD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L  +  RL  LLG  V KAD+  G EV+K +  + E  VL+LENVRFY  EEK
Sbjct:    6 LKDIDVKGKRVFCRVDFNVPMKDGK-VTDETRIRAAIPTIQYLVEQGAKVILASHLGRPKGEVVEELRLNAVAERLQALLGKDVAKADEAFGEEVKKTIDGMSEGDVLVLENVRFYPGEEK 125          
The following BLAST results are available for this feature:
BLAST of EY753457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CHLTE5.956e-3055.83Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_BACP21.088e-2955.81Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_PROM11.711e-2953.49Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_BACSU1.855e-2956.20Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]
PGK_EXISA2.423e-2958.12Phosphoglycerate kinase OS=Exiguobacterium sp. (st... [more]
PGK_CHLL22.902e-2954.17Phosphoglycerate kinase OS=Chlorobium limicola (st... [more]
PGK_PROMT3.777e-2953.49Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_MICAN3.777e-2953.49Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_NEUCR4.133e-2952.85Phosphoglycerate kinase OS=Neurospora crassa GN=pg... [more]
PGK_BACME4.133e-2955.37Phosphoglycerate kinase OS=Bacillus megaterium GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-A06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753457 ID=EY753457; Name=EY753457; organism=Citrus sinensis; type=EST; length=832bp
CTCTCTTTAACGATAAGAGAAATCTCCAATATCACCCAATCGTTTTTCCT
CCTCGCTCTTCACGTCCACATCTTCTTCATCTTCCCCACACATTTTCCTT
CCCCATTCTTCAATCAAACCAAAACCCACTTCCCATTTCTCCACTTTGTC
GACAAAGTTTCAATCTTTTGCGCCTTTACTACGCCACTCCACTCCCACCA
CATCAATGGCTTCAGCCACCGCTCCCACTACTTTATCTCTCGTCAAAACC
GCCGCAAGTTCATCCCTTTCTTCCCCACGCGCCTCCTTCCTGCGCATGCC
CACTTCAGCATCCCGCAGGCTGGGGTTCTCCGCAGCCGACCCGCTGCTGA
CCTGCCATGTGGCGTCGAGGCTGAGCTCGATTAAGACGAAGGGCACTCGT
GCGGTGGTGTCGATGGCGAANAAGAGCGTGGGGGAGTTGAGTGGAGCTGA
TTTGAAAGGGAAGAAGGTGTTTGTAAGAGCTGACTTGAATGTGCCTTTGG
ATGATAATCAGAACATTACTGATGATACTAGAATCAGAGCTGCTGTTCCC
ACCATCAAGCATTTGATTCAAAATGGAGCTAAAGTCATTCTTTCTAGCCA
CTTGGGAAGACCAAAGGGTGTTACTCCGAAATTCAGTTTGGCTCCTCTTG
TGCCTCGTCTTTCTGAACTCCTGGGCATTCAGGTTGTGAAGGCTGATGAC
TGCATTGGTCCAGAGGTAGAAAAGCTTGTAGCCTCACTTCCTGAAAGCGG
TGTTCTTCTTCTTGAAAACGTGAGGTTCTACANGGAGGAGGAAAAAAAAC
GATCCTGAGTTTGCCAAGAAGCTTGCCTCTTT
back to top