EY753451

Overview
NameEY753451
Unique NameEY753451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753451_ssr202 microsatellite EY753451_ssr202:202..225. BLAST: Citrus ESTs to Prunus persica proteins V1
EY753451_ssr104 microsatellite EY753451_ssr104:104..127. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: GGA2_YEAST (ADP-ribosylation factor-binding protein GGA2 OS=Saccharomyces cerevisiae GN=GGA2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 48/156 (30.77%), Postives = 73/156 (46.79%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQA-KDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDM---QLRDKILVLLDSWQEAFGGPGGKHPQY---YWAYEDLRRY----GVQFPKRSPDAAPIFTP 678
            + +A    L  PD  +N+DI D IN  Q  A +D   A+ K + ++ S V + AL+LL+ +VKNCG   H QI+ +  L E+VK     P +   +++  IL  ++ W +       KH  Y        D+ R     G  FPK S     +  P
Sbjct:   30 IQRACRMSLAEPDLALNLDIADYINEKQGAAPRDAAIALAKLINNRESHVAIFALSLLDVLVKNCGYPFHLQISRKEFLNELVKRFPGHPPLRYSKIQRLILTAIEEWYQTI----CKHSSYKNDMGYIRDMHRLLKYKGYAFPKISESDLAVLKP 181          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: GGA1_YEAST (ADP-ribosylation factor-binding protein GGA1 OS=Saccharomyces cerevisiae GN=GGA1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 44/156 (28.21%), Postives = 79/156 (50.64%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQA-KDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKPDM---QLRDKILVLLDSWQEAFGGPGGKHP------QYYWAYEDLRRY-GVQFPKRSPDAAPIFTP 678
            + +A    L  PD  +N+D+ D INS Q    ++ V A++K + + +++  + AL+LL+ +VKNCG  +H QI+ +  L ++VK   ++P +   +++  IL  ++ W +       KH       QY      L +Y G  FPK   +   +  P
Sbjct:   26 IQRACRSTLPEPDLGLNLDVADYINSKQGATPREAVLAIEKLVNNGDTQAAVFALSLLDVLVKNCGYSIHLQISRKEFLNDLVKRFPEQPPLRYSKVQQMILEAIEEWYQTI----CKHASYKDDLQYINDMHKLLKYKGYTFPKVGSENLAVLRP 177          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: VPS27_ASPCL (Vacuolar protein sorting-associated protein 27 OS=Aspergillus clavatus GN=vps27 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 45/140 (32.14%), Postives = 74/140 (52.86%), Query Frame = 1
Query:  244 VDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVKKKP---DMQLRDKILVLLDSWQEAFGGPGGKHPQYYW-AYEDLRRYGVQFPKRS 651
            V++ATS  L   D  +N++I D I S   Q K+ ++++K+RL+++N  VQ+  L L +T VKN G     +IA R  L  MV ++  +    +  +++K+L L+  W  A    G     Y    Y  L+  G +FP +S
Sbjct:   15 VERATSSSL--EDIALNLEISDLIRSKSVQPKEAMRSLKRRLENRNPNVQIATLKLTDTCVKNGGTHFLAEIASREYLDNMVSLLTAEGAPLNSDVKEKMLELIQDW--AMAAQGRMDLNYLGETYRKLQSEGFRFPPKS 150          
BLAST of EY753451 vs. ExPASy Swiss-Prot
Match: HSE1_CHAGB (Class E vacuolar protein-sorting machinery protein HSE1 OS=Chaetomium globosum GN=HSE1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 41/143 (28.67%), Postives = 68/143 (47.55%), Query Frame = 1
Query:  241 AVDKATSELLISPDWTMNIDICDSINSHQWQAKDVVKAVKKRLQHKNSKVQLLALTLLETMVKNCGDFVHFQIAERNVLGEMVKIVK-KKPDMQLRDKILVLLDSWQEAFGGPGGKHPQYYWAYEDLRRYGVQFPKRSPDAAP 666
            A++KAT E   S DW   ++ICD +       K+ V ++ KRL H+N+ VQL  L +   + +NCG  +H +++ R     ++K+   +    Q++ KIL  +  W + F       P     Y+   R     P   P +AP
Sbjct:   13 AINKATDENQTSEDWGAIMEICDRVAGDANGPKESVASLIKRLAHRNANVQLYTLEVANALSQNCGKNMHRELSSRAFTDALLKLANDRNTHTQVKAKILERMKDWSDMF----KSDPDLGIMYDAFYRLKQSNPTLQPPSAP 151          
The following BLAST results are available for this feature:
BLAST of EY753451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
GGA2_YEAST6.886e-1130.77ADP-ribosylation factor-binding protein GGA2 OS=Sa... [more]
GGA1_YEAST6.886e-1128.21ADP-ribosylation factor-binding protein GGA1 OS=Sa... [more]
VPS27_ASPCL8.994e-1132.14Vacuolar protein sorting-associated protein 27 OS=... [more]
HSE1_CHAGB8.994e-1128.67Class E vacuolar protein-sorting machinery protein... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-H09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753451 ID=EY753451; Name=EY753451; organism=Citrus sinensis; type=EST; length=857bp
CAACGATAACGTTGAAGGTAAAAAAAAAAAAAAGATATATAAATTCTTTG
AGCTTGAAAGCATTCATTGGCGGTGTATTTTTCTTGGACCGAATTTTCTC
GTTAAACAAACAAACAAACAAACAAACAGGAAAAAGTTTTCATTTTCTTT
TTCTGTTATCTAATTTGGAGGGAGAGATAGAGAGTAAAGATGATGTCGTC
ATCGTCGTCGTCGTCGTCGTCGTCGTCTTCGGCGACTGTGGCAGTTGACA
AGGCGACCAGCGAGCTTTTGATTAGTCCTGATTGGACTATGAACATCGAT
ATCTGTGATTCCATCAATTCTCATCAGTGGCAGGCGAAAGATGTTGTGAA
AGCAGTGAAGAAAAGGTTACAGCACAAGAACTCAAAAGTGCAACTTCTTG
CGTTGACGCTTTTAGAGACGATGGTGAAGAATTGTGGTGATTTTGTTCAT
TTTCAAATTGCTGAGAGGAATGTCTTGGGAGAGATGGTTAAAATTGTGAA
GAAGAAGCCAGATATGCAGCTGAGGGATAAAATCTTGGTTTTATTAGATT
CTTGGCAAGAGGCATTCGGTGGACCTGGGGGAAAACATCCTCAGTACTAC
TGGGCTTATGAGGATTTAAGGCGTTATGGAGTACAATTTCCCAAGCGTTC
ACCAGATGCTGCTCCTATATTTACACCTNCTGTTTCCCACCCACTCTANG
ACAAGCTCAAGCTAGTTATGGAATGCCTAGCATTTCCTCAAGAAAGCTTG
ACGAAACAATGGCGACAGAGGTTGAAACTTTAGATTTTCAAGCTTGGATC
TATGCGAGATGTTATGGAGCTGTTAAGTGACTGCTGCAAGCTGTAATCCT
AGCGACG
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