EY753444

Overview
NameEY753444
Unique NameEY753444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_LEPIC (Probable GTP-binding protein engB OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=engB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.401e-18
Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 3
Query:  423 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLIDA--SIPAKPIDL 776
            EF  S  + +  PS G P+ A  GRSN GKSSLLN+++ RK LA  S TPGKT+ +N F +N S YLVDLPG+GY+A   +          DY      L  + L+ D+   +P + ++L
Sbjct:   17 EFKASYGKADQIPSQGTPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFFFVNHSIYLVDLPGFGYSANSHKDHEAMMGLLMDYLNLAKDLKCLFLVCDSQRELPEEELEL 136          
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_WOLWR (Probable GTP-binding protein engB OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=engB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.360e-18
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  414 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI-NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLIDASIPAKPIDLDML 785
            +   F+  +   +  P++  PE A  GRSNVGKSSL+N L+  KK A  S  PG T+ IN + + ND + LVDLPGYGY+ A +E    +    + Y + R  L  V +LID+ +  K ID D +
Sbjct:    7 SNCNFIFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYNDKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRRNLRRVFVLIDSKVGLKEIDKDFI 131          
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_LEPBL (Probable GTP-binding protein engB OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=engB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.360e-18
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  423 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLIDA--SIPAKPIDL 776
            EF  S       PS G+P+ A  GRSN GKSSLLN+++ RK LA  S TPGKT+ +N F +N S YLVDLPG+GY+A   +          DY      L  + L+ D+   +P + ++L
Sbjct:   17 EFKASYGEANQIPSQGIPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFFFVNRSIYLVDLPGFGYSANSHKDHEAMMDLLMDYLNLAKDLKCLFLVCDSQRELPEEELEL 136          
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_LEPBJ (Probable GTP-binding protein engB OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=engB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.360e-18
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  423 EFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLIDA--SIPAKPIDL 776
            EF  S       PS G+P+ A  GRSN GKSSLLN+++ RK LA  S TPGKT+ +N F +N S YLVDLPG+GY+A   +          DY      L  + L+ D+   +P + ++L
Sbjct:   17 EFKASYGEANQIPSQGIPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFFFVNRSIYLVDLPGFGYSANSHKDHEAMMDLLMDYLNLAKDLKCLFLVCDSQRELPEEELEL 136          
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_RHOFD (Probable GTP-binding protein engB OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=engB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.862e-17
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 3
Query:  420 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRINDSW----YLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLID 746
            A+F+ ++ +    P+  +PE A VGRSN GKS+ +N+L ++K+LA  SK PG+TQ IN F +           DLPGYGYAA P++ +  W +   +Y + R  L ++VL+ D
Sbjct:    9 AKFLTTAPQLHFLPALDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINLFSLGKQGVTDAVFADLPGYGYAAVPKQDKIRWQQVMANYLVTRENLKAIVLMCD 121          
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_NITWN (Probable GTP-binding protein engB OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=engB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.862e-17
Identity = 56/141 (39.72%), Postives = 75/141 (53.19%), Query Frame = 3
Query:  369 GSNIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFR--INDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLIDASIPAKPIDLDML 785
            G +  L +  R     + +F+ +S   E  P     E A  GRSNVGKSSL+N+L  R  LA TS+TPG+TQ +  F         LVD+PGYG+A+AP+     W      + L R+TL  V +LIDA    K ID  +L
Sbjct:    4 GLDAELIEQGRKLFAGEWQFIWASPSIETLPPMSGLEVAFAGRSNVGKSSLINALTGRSALARTSRTPGRTQELIFFEGPKGVDVRLVDMPGYGFASAPKARIASWTSLIHQFLLGRATLARVYVLIDARHGIKDIDKTVL 144          
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_WOLPM (Probable GTP-binding protein engB OS=Wolbachia pipientis wMel GN=engB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.432e-17
Identity = 49/125 (39.20%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  414 AQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI-NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLIDASIPAKPIDLDML 785
            +   F+  +   +  P++  PE A  GRSNVGKSSL+N L+  KK A  S  PG T+ IN + + +D + LVDLPGYGY+ A +E    +    + Y + R  L  V +LID+ +  K ID D +
Sbjct:    7 SNCNFIFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYDDKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRENLRRVFVLIDSKVGLKEIDKDFI 131          
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_TREDE (Probable GTP-binding protein engB OS=Treponema denticola GN=engB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.432e-17
Identity = 51/133 (38.35%), Postives = 66/133 (49.62%), Query Frame = 3
Query:  408 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRIN--------------------DSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLID 746
            ++  AEF+K +V+ E  P  G+ EFA  GRSN GKSSL+N LV RK L  T   PG T+ +N F +N                    D + L DLPGYGYA     +    DK   +Y  NR  L  +  L+D
Sbjct:    2 KIINAEFIKGAVKAEQFPEIGVSEFAFFGRSNAGKSSLINMLVNRKNLVKTGSRPGMTREVNFFLVNRPASLNFNPKTKKFSGPAPKDMFVLTDLPGYGYAKLSGGMTLQIDKMLYEYCTNRPLLKIIFFLMD 134          
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_WOLSU (Probable GTP-binding protein engB OS=Wolinella succinogenes GN=engB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17
Identity = 54/142 (38.03%), Postives = 74/142 (52.11%), Query Frame = 3
Query:  411 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHFRI-------NDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLIDASIPAKPIDLDMLVGWGQIRFHD 815
            V ++ F+ S+      P     E   +GRSNVGKS+L+N +V  K LA +S TPGKTQ IN+F             +LVDLPG+GYA   +E+R DW +    +   R ++   V LIDA  P   ID +     G I+  D
Sbjct:    4 VVESSFLTSASALSQTPPPKNSEVVFIGRSNVGKSTLINLIVDSKGLAKSSSTPGKTQLINYFETIWKRGEERIPLWLVDLPGFGYAKVSKEMRKDWGEKLIHFLQERRSIKLFVQLIDARHPDLAIDAEAWAMIGAIKRGD 145          
BLAST of EY753444 vs. ExPASy Swiss-Prot
Match: ENGB_RHOPS (Probable GTP-binding protein engB OS=Rhodopseudomonas palustris (strain BisB5) GN=engB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17
Identity = 56/139 (40.29%), Postives = 71/139 (51.08%), Query Frame = 3
Query:  375 NIVLSKYARDAQVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPGKTQCINHF--RINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVVLLIDASIPAKPIDLDML 785
            N  L +  R        F+ +S   E  P     E A  GRSNVGKSSL+N+L  R  LA TS TPG+TQ +  F    +    LVD+PGYGYAAA +     W      +   R+TL  V +LID     K +DLD+L
Sbjct:    6 NPTLIERGRKVFAGDWHFIWASPSIETLPPMAGIEVAFAGRSNVGKSSLINALTGRNALARTSNTPGRTQELIFFDGPTDAGLRLVDMPGYGYAAASKAKVASWTSLIHKFLQGRATLARVYVLIDGRHGLKDVDLDIL 144          
The following BLAST results are available for this feature:
BLAST of EY753444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENGB_LEPIC6.401e-1841.67Probable GTP-binding protein engB OS=Leptospira in... [more]
ENGB_WOLWR8.360e-1840.00Probable GTP-binding protein engB OS=Wolbachia sp.... [more]
ENGB_LEPBL8.360e-1841.67Probable GTP-binding protein engB OS=Leptospira bo... [more]
ENGB_LEPBJ8.360e-1841.67Probable GTP-binding protein engB OS=Leptospira bo... [more]
ENGB_RHOFD1.862e-1739.82Probable GTP-binding protein engB OS=Rhodoferax fe... [more]
ENGB_NITWN1.862e-1739.72Probable GTP-binding protein engB OS=Nitrobacter w... [more]
ENGB_WOLPM2.432e-1739.20Probable GTP-binding protein engB OS=Wolbachia pip... [more]
ENGB_TREDE2.432e-1738.35Probable GTP-binding protein engB OS=Treponema den... [more]
ENGB_WOLSU3.177e-1738.03Probable GTP-binding protein engB OS=Wolinella suc... [more]
ENGB_RHOPS3.177e-1740.29Probable GTP-binding protein engB OS=Rhodopseudomo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-G12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753444 ID=EY753444; Name=EY753444; organism=Citrus sinensis; type=EST; length=908bp
AAAATCAATCCTGTCTTTCCCCATTCGTCACAGCACAGCAGCAGCGAAGA
CATGGCCACTCAAAATCTCTTGTAATCGAAAACCGCACACACAGAAAAAT
GCTTTTTTCTCAGCTTCCAAGACTCAACTTTTCAATATTCGTAAAGCCAC
CCCTGTCTCTCCGCTCACACTTCACCCTCTTACCAAAACACAGGCTCAAC
TTCTCAGCGCTCAAATCCACACTCTCCACAACCGAACCGATACCCATATC
CCACGCGGTAGAACCAGAACCAGAACCCCACGTGGCAATATCACTCGAAA
AGCTATTTGTCCCGCCGGAAACAGAGGTCTCAATCGATGATTCGTCGTTG
AGTACGAGAATATTGAAGGGTTCGAACATAGTGTTGAGTAAGTACGCAAG
GGATGCTCAAGTTGCACAAGCTGAGTTCGTGAAGAGTAGTGTTAGGACTG
AGGATTGCCCCTCTGATGGGTTGCCTGAATTTGCGCTGGTGGGCAGGTCT
AATGTTGGCAAATCTTCGCTTCTTAATTCACTTGTTAGAAGGAAGAAGCT
TGCTCTCACATCTAAGACACCTGGGAAAACACAATGCATCAATCATTTTC
GGATAAATGATAGTTGGTACTTGGTGGATTTGCCTGGATATGGGTATGCA
GCTGCTCCTCGGGAACTTCGAACCGACTGGGACAAATTCACTAAAGACTA
TTTCCTTAATCGCTCAACTTTGGTCTCAGTGGTTCTTCTCATAGATGCTA
GCATTCCTGCAAAACCTATTGATCTTGATATGCTAGTTGGCTGGGGACAG
ATCAGATTCCATGACATTAGTCTTCACCAAATGCGACAGCGGNAGAAGAA
AAGATGGGAGGCAAGACCAGAGAAATCTGACGATTTCAGAGCTGATCAGG
CTTCTTCA
back to top