EY753434

Overview
NameEY753434
Unique NameEY753434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1842 contig Csv1_Contig1842:31..644. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECOSE (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain SE11) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLU (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLI (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain K12) GN=msrB PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLC (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECOL6 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O6 GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECOL5 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECOHS (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O9:H4 (strain HS) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECODH (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain K12 / DH10B) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECOBW (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain K12 / BW2952) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY753434 vs. ExPASy Swiss-Prot
Match: MSRB_ECO8A (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O8 (strain IAI1) GN=msrB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19
Identity = 52/119 (43.70%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   70 LSPEQFMILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKSPTDERHCVNSVSIKFIPGD 417
            LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:   14 LSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
The following BLAST results are available for this feature:
BLAST of EY753434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
MSRB_ECOSE1.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLU1.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLI1.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLC1.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOL61.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOL51.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOHS1.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECODH1.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOBW1.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECO8A1.307e-1943.70Peptide methionine sulfoxide reductase msrB OS=Esc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-002-G02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753434 ID=EY753434; Name=EY753434; organism=Citrus sinensis; type=EST; length=613bp
ATTGAAACCTACCCCATGACTGCTGCAGCAGATTCCGTTCAGAAAACCGA
GGAATAATGGCGGGCCATTCTCTCCCCCGAGCAGTTTATGATTCTACGCC
AGAAAGGAACCGAGCCGCGAGGAACTGGGGAGTACAACAAGTTGTATGCG
GATGGGTTTTACAACTGTGCTGGCTGTGGAACTGCGCTTTACAAGTCTGT
TACCAAATTCGATTCTGGATGTGGGTGGCCAGCTTTCTATGAAGGTCTTC
CTGGAGCCATAAATCGCTCCCCTGATCCTGATGGAAGGAGAACCGAGATA
ACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACGTCTTCAAAGGGGAGGG
ATTCAAATCGCCTACTGATGAACGCCACTGTGTCAATAGTGTTTCAATTA
AGTTTATTCCAGGTGATGCTCCTGCTTCATCATGAAGATTGTAATACTGT
CATGGGGTTGTTGAATAAGATTTGACTGTTTGTCACTTCTGCCAATGTTG
TTGGCTTTAATGTCCTAGACATGGCGTTGTNTGTATAATTATTACGCGGC
CAATTTGTCCCTATGCCATAGTTTAAACCACTTTGGTTGGTTTGCAAAAA
AAAAAAAAAAAAA
back to top